Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5195_g15364
Locus habu1_scaffold5195 : 892890 ... 952808 : +
To GenomeBrowser habu1_scaffold5195:892890..952808
Genes list of scaffold habu1_scaffold5195

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.6
Venom grand-1 0.3
Pit, infrared sensing 1.6
Nose 6.4
Brain-1 1.7
Eye 0.5
fetal fibroblast 0.1
venom gland-2 0.2
Brain-2 1.8
Spleen 0.2
Lung 1.0
Liver 0.1
Kidney 1.5
Pancreas 0.4
Small intestine 0.1
Large intestine 0.1
Stomach 0.1
heart 0.3
ovary 1.1
cheek muscle 0.2

Transcript
Transcript IDhabu1_s5195_g15364.t1
Definition-
>habu1_s5195_g15364.t1
ccgcgcctggtcctgaagggtggccgctcctggggagtatgcatgatgtcttccttatcatctgcaagaatctcatctac
accactatcttcagttgtattaagtgccagaaggacagaatcccatgatattcttaatattgtcagtcttatgaaatatg
atacagaaagactgtttggcaggattaatgtcatatatcttttagaaaaaactaatcttgcagtgactgtgattaatgac
aaaaatataagtgttgctcatgctgcatttttggattatcctaactggggtgttgctgatgaagctaattgggaagtata
tatgaaacaaaactatcctgagacaaagtgtacacctttgaatacactatttatgcatctgtttgtagcaactgatgaat
atgcagtagattgttgtcacgaaattatgaagactgtttttaaaactgtaccagaattacatttcgtatttctcttcata
ccatttcaagaggaattgggtatagatttggcagcagcttttgagcccatgaggaatcctgtcagttcatctctgattat
ggaatatagcctccatgtgtcacacaggcatcaatattgcccccagttgtatattcgctgtgccagggtagaagaccatg
atgatctcactccgatcttttcacggcataatgatactctaaggcagacctatggagactatttcctcgctgaactgata
gaagctcaagatgaaaataatcttgctgtggtttgtgaggataatggcttagcagtggggttcatgagtatatgttctga
agtgaatgttcagctgcttcatgactgctttgacttgaaacttttccacggactttgcaaaccacatccagatgatattc
ttaaaccaccatgcgtttcaagtgaaattacaggagacgaaaacattagcttaggaagtcaaagagaagagattatggat
acccagagtatagatatccagagaaccagcaaaattggaaccatcttttcccaagcttcaagtgcaaatgcaatgctatc
aaaagaaagtattcagaaagaggaaatacttgctcaggtttcattagaactatcattagaaagcgacggaagtaaggatc
tgaaagcaactgaacaaccatctactattagttttgaaagtcaacctttccatcctctatataaaggagaagtaaatgcc
ttttgtattcagctcttttgtattgatgagcagcatgaaacaagggtcagttccagtcagtgtgatgatataagaggtta
tttctggatggggctgcactattcaagacaaaaccaatatgcaactttcatgtcctcctcaatgcacagttcctgtttga
acagcagccatggcctggggggacctttgcacagcttaatgttatgcacctcttatgcttcttcctggattaagtggtca
ctggatttcttaaattttgtttttgaacttttcccagataaagacttctgcatcatcacggtgccacatatggtccctga
atttcacctgattcagagttttgttaggattattccctttagcaattgtacactggatcaggagctatatgtatttcatc
gttctggattgctcaagtcttttcgtgtaagagcagcaaaatctactgatgtctttgccattaaaagactaatccaaacc
ctggaattgaacgtagccatattggatgacctaaataactacttatcagcacgaagagatccagatggaacaccagttca
ggcatttgtagcagaggttttgaatcaaatcgttggaatatctgttattagaaatgaaatggatatcgaatatattcgct
cacattacaacattgaagattttatctatttcagtcattaccagcaggaagaacatggccacctttaccatttttctatc
aatccaatttttcatcattatgccaaacattttatgaaggaaatacttcggttagcctacaaatcttgcctctattatcc
tatttatccccagcctgaagaaggcaagttccagaatccctgtgcccattccctgacatctgccctacattacatggttc
ccgtgcgaccaagacgacagattgtctatcctctggaaaagcttggcataaatgctccatcaaaacaagtctctaaggat
cagtaaggactttctgggtctcactaaaaggacattttctgctacagaagattgcataaaatgtaagtatctttctggta
ct
Transcript IDhabu1_s5195_g15364.t2
Definition-
>habu1_s5195_g15364.t2
ccgcgcctggtcctgaagggtggccgctcctggggagtatgcatgatgtcttccttatcatctgcaagaatctcatctac
accactatcttcagttgtattaagtgccagaaggacagaatcccatgatattcttaatattgtcagtcttatgaaatatg
atacagaaagactgtttggcaggattaatgtcatatatcttttagaaaaaactaatcttgcagtgactgtgattaatgac
aaaaatataagtgttgctcatgctgcatttttggattatcctaactggggtgttgctgatgaagctaattgggaagtata
tatgaaacaaaactatcctgagacaaagtgtacacctttgaatacactatttatgcatctgtttgtagcaactgatgaat
atgcagtagattgttgtcacgaaattatgaagactgtttttaaaactgtaccagaattacatttcgtatttctcttcata
ccatttcaagaggaattgggtatagatttggcagcagcttttgagcccatgaggaatcctgtcagttcatctctgattat
ggaatatagcctccatgtgtcacacaggcatcaatattgcccccagttgtatattcgctgtgccagggtagaagaccatg
atgatctcactccgatcttttcacggcataatgatactctaaggcagacctatggagactatttcctcgctgaactgata
gaagctcaagatgaaaataatcttgctgtggtttgtgaggataatggcttagcagtggggttcatgagtatatgttctga
agtgaatgttcagctgcttcatgactgctttgacttgaaacttttccacggactttgcaaaccacatccagatgatattc
ttaaaccaccatgcgtttcaagtgaaattacaggagacgaaaacattagcttaggaagtcaaagagaagagattatggat
acccagagtatagatatccagagaaccagcaaaattggaaccatcttttcccaagcttcaagtgcaaatgcaatgctatc
aaaagaaagtattcagaaagaggaaatacttgctcaggtttcattagaactatcattagaaagcgacggaagtaaggatc
tgaaagcaactgaacaaccatctactattagttttgaaagtcaacctttccatcctctatataaaggagaagtaaatgcc
ttttgtattcagctcttttgtattgatgagcagcatgaaacaagggtcagttccagtcagtgtgatgatataagaggtta
tttctggatggggctgcactattcaagacaaaaccaatatgcaactttcatgtcctcctcaatgcacagttcctgtttga
acagcagccatggcctggggggacctttgcacagcttaatgttatgcacctcttatgcttcttcctggattaagtggtca
ctggatttcttaaattttgtttttgaacttttcccagataaagacttctgcatcatcacggtgccacatatggtccctga
atttcacctgattcagagttttgttaggattattccctttagcaattgtacactggatcaggagctatatgtatttcatc
gttctggattgctcaagtcttttcgtgtaagagcagcaaaatctactgatgtctttgccattaaaagactaatccaaacc
ctggaattgaacgtagccatattggatgacctaaataactacttatcagcacgaagagatccagatggaacaccagttca
ggcatttgtagcagaggttttgaatcaaatcgttggaatatctgttattagaaatgaaatggatatcgaatatattcgct
cacattacaacattgaagattttatctatttcagtcattaccagcaggaagaacatggccacctttaccatttttctatc
aatccaatttttcatcattatgccaaacattttatgaaggaaatacttcggttagcctacaaatcttgcctctattatcc
tatttatccccagcctgaagaaggcaagttccagaatccctgtgcccattccctgacatctgccctacattacatggttc
ccgtgcgaccaagacgacagattgtctatcctctggaaaagcttggcataaatgctccatcaaaacaagtctctaaggat
caggacaggaaagggtataagaggttgggactgcagctgattgatttgccattggccaatagctgtccttgctggatctg
ctatgtcattggtcctcattgcaatggattgctaattaaggactttctgggtctcactaaaaggacattttctgctacag
aagattgcataaaat

Protein
Protein IDhabu1_s5195_g15364.t1
Definition-
>habu1_s5195_g15364.t1
MKYDTERLFGRINVIYLLEKTNLAVTVINDKNISVAHAAFLDYPNWGVADEANWEVYMKQNYPETKCTPLNTLFMHLFVA
TDEYAVDCCHEIMKTVFKTVPELHFVFLFIPFQEELGIDLAAAFEPMRNPVSSSLIMEYSLHVSHRHQYCPQLYIRCARV
EDHDDLTPIFSRHNDTLRQTYGDYFLAELIEAQDENNLAVVCEDNGLAVGFMSICSEVNVQLLHDCFDLKLFHGLCKPHP
DDILKPPCVSSEITGDENISLGSQREEIMDTQSIDIQRTSKIGTIFSQASSANAMLSKESIQKEEILAQVSLELSLESDG
SKDLKATEQPSTISFESQPFHPLYKGEVNAFCIQLFCIDEQHETRVSSSQCDDIRGYFWMGLHYSRQNQYATFMSSSMHS
SCLNSSHGLGGPLHSLMLCTSYASSWIKWSLDFLNFVFELFPDKDFCIITVPHMVPEFHLIQSFVRIIPFSNCTLDQELY
VFHRSGLLKSFRVRAAKSTDVFAIKRLIQTLELNVAILDDLNNYLSARRDPDGTPVQAFVAEVLNQIVGISVIRNEMDIE
YIRSHYNIEDFIYFSHYQQEEHGHLYHFSINPIFHHYAKHFMKEILRLAYKSCLYYPIYPQPEEGKFQNPCAHSLTSALH
YMVPVRPRRQIVYPLEKLGINAPSKQVSKDQ
Protein IDhabu1_s5195_g15364.t2
Definition-
>habu1_s5195_g15364.t2
MKYDTERLFGRINVIYLLEKTNLAVTVINDKNISVAHAAFLDYPNWGVADEANWEVYMKQNYPETKCTPLNTLFMHLFVA
TDEYAVDCCHEIMKTVFKTVPELHFVFLFIPFQEELGIDLAAAFEPMRNPVSSSLIMEYSLHVSHRHQYCPQLYIRCARV
EDHDDLTPIFSRHNDTLRQTYGDYFLAELIEAQDENNLAVVCEDNGLAVGFMSICSEVNVQLLHDCFDLKLFHGLCKPHP
DDILKPPCVSSEITGDENISLGSQREEIMDTQSIDIQRTSKIGTIFSQASSANAMLSKESIQKEEILAQVSLELSLESDG
SKDLKATEQPSTISFESQPFHPLYKGEVNAFCIQLFCIDEQHETRVSSSQCDDIRGYFWMGLHYSRQNQYATFMSSSMHS
SCLNSSHGLGGPLHSLMLCTSYASSWIKWSLDFLNFVFELFPDKDFCIITVPHMVPEFHLIQSFVRIIPFSNCTLDQELY
VFHRSGLLKSFRVRAAKSTDVFAIKRLIQTLELNVAILDDLNNYLSARRDPDGTPVQAFVAEVLNQIVGISVIRNEMDIE
YIRSHYNIEDFIYFSHYQQEEHGHLYHFSINPIFHHYAKHFMKEILRLAYKSCLYYPIYPQPEEGKFQNPCAHSLTSALH
YMVPVRPRRQIVYPLEKLGINAPSKQVSKDQDRKGYKRLGLQLIDLPLANSCPCWICYVIGPHCNGLLIKDFLGLTKRTF
SATEDCIK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495