Gene
| Gene Model ID | habu1_s5205_g15379 |
|---|---|
| Locus | habu1_scaffold5205 : 58566 ... 69212 : + |
| To GenomeBrowser | habu1_scaffold5205:58566..69212 |
| Genes list of scaffold | habu1_scaffold5205 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-22a | GO:0003924 GO:0005525 GO:0005769 GO:0005886 GO:0006897 GO:0007032 GO:0007264 GO:0008152 GO:0015629 GO:0019003 GO:0045335 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5205_g15379.t1 | 1 | 1 | Ras | 2 | 124 | 5.4e-40 | 136.4 | 2.90069e-43 | 6.10001e-40 | 136.2 |
| habu1_s5205_g15379.t1 | 1 | 1 | Miro | 3 | 79 | 1.8e-11 | 44.6 | 1.5e-14 | 3.1e-11 | 43.8 |
| habu1_s5205_g15379.t1 | 1 | 1 | Arf | 3 | 90 | 9.6e-08 | 31.4 | 4.8e-11 | 1.0e-07 | 31.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5205_g15379.t1 | gi|733917798|ref|XP_010720855.1| | PREDICTED: ras-related protein Rab-22A isoform X2 [Meleagris gallopavo] | 0.0 |
| habu1_s5205_g15379.t1 | gi|698469586|ref|XP_009705763.1| | PREDICTED: ras-related protein Rab-22A [Cariama cristata] | 0.0 |
| habu1_s5205_g15379.t1 | gi|700384478|ref|XP_009932228.1| | PREDICTED: ras-related protein Rab-22A [Opisthocomus hoazin] | 0.0 |
| habu1_s5205_g15379.t1 | gi|697846631|ref|XP_009643684.1| | PREDICTED: ras-related protein Rab-22A [Egretta garzetta] | 0.0 |
| habu1_s5205_g15379.t1 | gi|326932152|ref|XP_003212184.1| | PREDICTED: ras-related protein Rab-22A isoform X1 [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.9 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 2.5 |
| Nose | 5.7 |
| Brain-1 | 8.1 |
| Eye | 0.7 |
| fetal fibroblast | 17.5 |
| venom gland-2 | 2.1 |
| Brain-2 | 7.5 |
| Spleen | 2.2 |
| Lung | 0.9 |
| Liver | 2.8 |
| Kidney | 2.2 |
| Pancreas | 4.3 |
| Small intestine | 3.6 |
| Large intestine | 2.3 |
| Stomach | 4.1 |
| heart | 1.2 |
| ovary | 23.8 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s5205_g15379.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15379.t1 gatccaaacatcaatccaacaattggagcatcttttatgaccaagacagtgcagtatcagaatgaattacataaattcct aatatgggatacagcaggacaagaacgatttcgtgctctggcaccaatgtattatcgagggtctgcagcagctattatag tctatgatattacaaaagaggaaacattttcaacattaaaaaactgggtaaaagaacttcgccagcatggaccgcccaat attgtcgtagcaattgctggaaataagtgtgatcttaatgatgtaagagaagttatcgaaaaagatgctaaagactatgc agattccatccatgcaatatttgtagagactagtgcaaaaaatgcaataaacataaatgaactgttcatagaaataagtc gtagaattccgtcaacagataccaaccctccatctcttggtaagggcttcaaacttaggagacagccttctgtgacaaaa cgcagctgttgttgatactgagacccaccaagctagcttttataaagtatttggccttaaacattaag |
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Protein
| Protein ID | habu1_s5205_g15379.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15379.t1 MTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL NDVREVIEKDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSLGKGFKLRRQPSVTKRSCC |
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