Gene
| Gene Model ID | habu1_s5205_g15382 |
|---|---|
| Locus | habu1_scaffold5205 : 138665 ... 150295 : - |
| To GenomeBrowser | habu1_scaffold5205:138665..150295 |
| Genes list of scaffold | habu1_scaffold5205 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5205_g15382.t2 | 2 | 1 | APCDDC | 2 | 196 | 0.0 | 334.2 | 0.0 | 0.0 | 248.1 |
| habu1_s5205_g15382.t2 | 2 | 2 | APCDDC | 201 | 342 | 0.0 | 334.2 | 1.1e-27 | 7.9e-24 | 84.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.4 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 12.2 |
| Nose | 4.0 |
| Brain-1 | 0.9 |
| Eye | 5.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.7 |
| Brain-2 | 0.9 |
| Spleen | 1.9 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 1.9 |
| Pancreas | 0.0 |
| Small intestine | 0.4 |
| Large intestine | 1.0 |
| Stomach | 0.4 |
| heart | 0.8 |
| ovary | 0.3 |
| cheek muscle | 2.4 |
Transcript
| Transcript ID | habu1_s5205_g15382.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15382.t1 tataccatttcagacaaaaggttgtccaatctcttctttaaaacctccaatgctggagcacccacagtttctggaggtgt gaagtgcgcccaggacctgaattccttactcggtcatacatgttctttgccaaccgcctcttcaaagcctatcagtttta ctaccatgatccttcctgtagagagcccacctactctctggtcattaaagggagaatcaggctccggcaggcatcctgga tcaccctgggggctacagaagcagattatcaccttcataaagttggcattgtcttctacagccagagggccatgcaggaa atggttgcccgcctcaaccaaacaggagtgcgctgcagtggatttttgccagctggacggacttgggctcctgataccct ctatgagcttctgagtcctaagggggaggaggactgcacccctggccttggctttgccatgcatgagcttagcctggtac gagtggagaagtaccaccagcctttgctcctccagcacaaccaggggagcagggaggttgaggagttgtatcttggagac attcacactgaatggtcagagcggcttcagtatcggcctacaggatatcagcgcccactgcaaaacgccatgcaccacat ccatccctgtcctgcctgtgggattatatacagagctgacgaacataacccgccagtattaccagccagacctgagcttc ctatgctgctcagcggccactgggtcagctctcgctgcgaagtacgcccagctgtgctttttcttaccagatacttcatc ttccatgccaacaaccgcagctgggaaggctactatcaccactactctgaccctctctgcaagcaaccaactttcactgt ctatgccttgggtcattacaacgagggagcaccatccgtcattgtgagaggaggcaccgagctgatcttcaaggtgaccc atgctcgggtgacacctatggatcaggtcaccgtgtccatgctgaactcctctgatttggggagttgcggagaggctgga tcttggcacattgggcaggagctcgatgtgactcacaccaatgggtgtgcagctctaggtattaagctcccccacaccga gtatgaactcttccgcctcgaacgagatggaaaagaccggagcctgctctttattggtgagagaccaaccgatgggtcaa gtcctaacactctcgtaagaataggcctcccaaagcttaggaaagaacaagtgatcctatgcaacctaaattaactcagg atgatgcatatgggatcttataataaaaagctgctgtaattttgttttt |
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| Transcript ID | habu1_s5205_g15382.t2 |
| Definition | - |
>habu1_s5205_g15382.t2 agaatttcaactgttctaccgccacggttagaaggtcattggatctcaacagggtgtgaagtgcgcccaggacctgaatt ccttactcggtcatacatgttctttgccaaccgcctcttcaaagcctatcagttttactaccatgatccttcctgtagag agcccacctactctctggtcattaaagggagaatcaggctccggcaggcatcctggatcaccctgggggctacagaagca gattatcaccttcataaagttggcattgtcttctacagccagagggccatgcaggaaatggttgcccgcctcaaccaaac aggagtgcgctgcagtggatttttgccagctggacggacttgggctcctgataccctctatgagcttctgagtcctaagg gggaggaggactgcacccctggccttggctttgccatgcatgagcttagcctggtacgagtggagaagtaccaccagcct ttgctcctccagcacaaccaggggagcagggaggttgaggagttgtatcttggagacattcacactgaatggtcagagcg gcttcagtatcggcctacaggatatcagcgcccactgcaaaacgccatgcaccacatccatccctgtcctgcctgtggga ttatatacagagctgacgaacataacccgccagtattaccagccagacctgagcttcctatgctgctcagcggccactgg gtcagctctcgctgcgaagtacgcccagctgtgctttttcttaccagatacttcatcttccatgccaacaaccgcagctg ggaaggctactatcaccactactctgaccctctctgcaagcaaccaactttcactgtctatgccttgggtcattacaacg agggagcaccatccgtcattgtgagaggaggcaccgagctgatcttcaaggtgacccatgctcgggtgacacctatggat caggtcaccgtgtccatgctgaactcctctgatttggggagttgcggagaggctggatcttggcacattgggcaggagct cgatgtgactcacaccaatgggtgtgcagctctaggtattaagctcccccacaccgagtatgaactcttccgcctcgaac gagatggaaaagaccggagcctgctctttattggtgagagaccaaccgatgggtcaagtcctaacactctcgtaagaata ggcctcccaaagcttaggaaagaacaagtgatcctatgcaacctaaattaactcaggatgatgcatatgggatcttataa taaaaagctgctgtaattttgttttt |
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Protein
| Protein ID | habu1_s5205_g15382.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15382.t1 MFFANRLFKAYQFYYHDPSCREPTYSLVIKGRIRLRQASWITLGATEADYHLHKVGIVFYSQRAMQEMVARLNQTGVRCS GFLPAGRTWAPDTLYELLSPKGEEDCTPGLGFAMHELSLVRVEKYHQPLLLQHNQGSREVEELYLGDIHTEWSERLQYRP TGYQRPLQNAMHHIHPCPACGIIYRADEHNPPVLPARPELPMLLSGHWVSSRCEVRPAVLFLTRYFIFHANNRSWEGYYH HYSDPLCKQPTFTVYALGHYNEGAPSVIVRGGTELIFKVTHARVTPMDQVTVSMLNSSDLGSCGEAGSWHIGQELDVTHT NGCAALGIKLPHTEYELFRLERDGKDRSLLFIGERPTDGSSPNTLVRIGLPKLRKEQVILCNLN |
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| Protein ID | habu1_s5205_g15382.t2 |
| Definition | - |
>habu1_s5205_g15382.t2 MFFANRLFKAYQFYYHDPSCREPTYSLVIKGRIRLRQASWITLGATEADYHLHKVGIVFYSQRAMQEMVARLNQTGVRCS GFLPAGRTWAPDTLYELLSPKGEEDCTPGLGFAMHELSLVRVEKYHQPLLLQHNQGSREVEELYLGDIHTEWSERLQYRP TGYQRPLQNAMHHIHPCPACGIIYRADEHNPPVLPARPELPMLLSGHWVSSRCEVRPAVLFLTRYFIFHANNRSWEGYYH HYSDPLCKQPTFTVYALGHYNEGAPSVIVRGGTELIFKVTHARVTPMDQVTVSMLNSSDLGSCGEAGSWHIGQELDVTHT NGCAALGIKLPHTEYELFRLERDGKDRSLLFIGERPTDGSSPNTLVRIGLPKLRKEQVILCNLN |
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