Gene
| Gene Model ID | habu1_s5205_g15383 |
|---|---|
| Locus | habu1_scaffold5205 : 225986 ... 357729 : + |
| To GenomeBrowser | habu1_scaffold5205:225986..357729 |
| Genes list of scaffold | habu1_scaffold5205 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| syntaxin-16 isoform x4 | GO:0005484 GO:0005794 GO:0006886 GO:0006891 GO:0031201 GO:0061025 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5205_g15383.t1 | 1 | 1 | Syntaxin | 130 | 227 | 3.7e-14 | 52.7 | 3.8e-17 | 3.7e-14 | 52.7 |
| habu1_s5205_g15383.t1 | 1 | 1 | SNARE | 290 | 352 | 3.3e-20 | 71.5 | 3.3e-23 | 3.3e-20 | 71.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5205_g15383.t1 | gi|602651179|ref|XP_007431975.1| | PREDICTED: syntaxin-16 isoform X6 [Python bivittatus] | 0.0 |
| habu1_s5205_g15383.t1 | gi|602651177|ref|XP_007431974.1| | PREDICTED: syntaxin-16 isoform X5 [Python bivittatus] | 0.0 |
| habu1_s5205_g15383.t1 | gi|602651175|ref|XP_007431973.1| | PREDICTED: syntaxin-16 isoform X4 [Python bivittatus] | 0.0 |
| habu1_s5205_g15383.t1 | gi|556969831|ref|XP_005993618.1| | PREDICTED: syntaxin-16 isoform X5 [Latimeria chalumnae] | 0.0 |
| habu1_s5205_g15383.t1 | gi|556969828|ref|XP_005993617.1| | PREDICTED: syntaxin-16 isoform X4 [Latimeria chalumnae] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 4.1 |
| Nose | 4.2 |
| Brain-1 | 6.8 |
| Eye | 5.4 |
| fetal fibroblast | 5.8 |
| venom gland-2 | 6.9 |
| Brain-2 | 7.3 |
| Spleen | 4.5 |
| Lung | 3.0 |
| Liver | 3.2 |
| Kidney | 5.0 |
| Pancreas | 4.2 |
| Small intestine | 4.5 |
| Large intestine | 2.9 |
| Stomach | 3.4 |
| heart | 5.8 |
| ovary | 7.5 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s5205_g15383.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15383.t1 gaggactttccctgcccgggagcgccgtgcatgcgtggttccgccccctgcgccggccgaggcgtagctggcaagcggca gagacggagcaggccgaccaccagctggcccagttcaagggaggtcacaggagaagatgatcgcatgagcccaggatatt gcaactgtcataaatatgagtcggtttccaagagtctgaattttgatcgcatggccatggagatgctgcgttggttgacc tctaggaaactttcaggcatggccacccggcgtttaacagacgcgtacttgttgttgcggaacaacgcgatccaaagccg gcagctgctggctgagcaacttgcagatgaccgcatggcactggtatcaggtatcagtttagatcctgaagcagctgtct gtgtatctaagaggttgcctcccaagtggattgatggtatagaagaaattcaatatgagatatccaggataaaacagaag atgaaagaactagccagtttgcatgacaagcatttaaacagaccgactttggatgacagcagtgaggaagaacatgcaat agaaataaccactcaagaaattacacagctatttcacaggtgtcagagagcagtccagggtttgcacaacaagtctcgaa gctgtacaaaccaagagtgccggcttctgaagaacgttgtgtgttccttagctcagtctctacaggacctctccaccagc tttaggcatgggcaatctgactatctcaaacgcatgaaaaatcgagaagaaagatccaaacatttctttgacacctcagt ctccctcatggacgatggggaggatacgacactctacgataggggttttacagatgaccagttagtattagtggaacaaa acactattttggtggaagagcgggaacgagaaattcgacaagttatacagtccattactgatcttaatgaaattttcagg gatttaggagcaatggtagtcgaacagggtactgtactggataggattgactacaatgttgaacaatcatgcataaaaac agaggaaggattgaaacagctacataaagctgagcagtatcaaaagaagaatcggaagatgcttatcattttaattttgt ttgtcatagttattgtccttatcattgtccttattgctgtaaaatttcgctaggcaatgtgccagtgatgtttttctttc tctctgtatttgtctgagaggtagcaacaaatttttgtgtgttgtgtttctcctgtttttgttcctgagaggaatggttg agcctgtgctcttgaaagctgcctgttggacgaatgtacgagatctaatggtgcaaagtctgtgcaatgttcatacagaa aacctgttttacatgttcagtgaatatggaaggcagtgatttgtaaaaaaaaaatgtgtagaaatgtcagaatttctgag aaaagctaccaaatcaggcatttcatttatccaggccactgaaactctagaatgcatttttaaaagtgatttaaacattt tgggaagtgcttttactaaataggaataataatgtgctttctaccatgacgtagcctacggttaattttagggtaagctg tccaaattgtgatgtggacatcattcccaaaactatcgagttggagattttaaataatgccttaaacatacaatatttcc actttaccattctcccctccagagttagtattagtatgggttcacagaaataaaaaagatttctaatttcattctattat tccaaaagtggtggttggcattatcaataatattctaatcgcagggagtattattgttttaagattatttttaagtttta aataatcaggaatgtgctttgattatttccacctcttcccactattgaactgaaagttgtttctctgatccctctttctg aatcttccttctcaaactgaatctgttaatatacagcagcagttacacatttcatcttattgttttcagaatgtgaaggg aaaagggcgtggtacaattcatacacagtttaaattgaactagtgacaatatcaggaacttacatctaaataaaataact tttaagctgtgagatctcaggagaatttggaatcctgttcagccaagagcagatgttgctctgcctcagtattacttgtt tctctaacatagtaggtggctgtgctgaaaaagtttttgtgattaaattatatttatatgctatatttacagttaaatat atatttaactaacttaaaattgcatggcaatttggggcccttggtgttcaatccttttttttttaaagcattctgtactg aagaacttaaaggttgtagtttgcattctctttttgctgtgatttagcaacaccacttgccaactttttttaattgtctt ggattcttatccatttgatcgtgcaataattgcaacgctgctgtgtacttgttacaccttgttttcttcctttcatccag ctctttgcatcgttcagatttcttgtatctgagacagggaaacagaaatcatagctctcccttgggtcaatgggagattc tgcttgctagataaagggagaatcccacatagcatttttatagttgaagcccctttgacgtaaagaggatcgccacaaga gaattgtgttcagctgttgctattattctgtcagtgagaaggtaaagaagtgctcttagtgaactctgctcagctatttt gattcatctcctatctacaggaggctgctttatgccttccgatacagtggaccattgcttcccggaagaatggaattcaa gctctttatattaccatctgcagcaactatcagttgcacagatagatttgtgatttgaacaagttctggcctagccaaat agcagtgaataacaagatacagatagcatgagaaatatggaaagtaaacatactgtattttatgcatgtgcaaaaatcca tttgctccttgtgtatgcataaaatagacaaaaatatgccaagaatgatggttgccagggtctggtctgtattttctaac tggataacaagggctgcctgtatttgctgaaagtatcattctgttacctaaagtagaataccaattatagctgacctttt tcttttcaaaacaagaaaaagctgagcatctgttgacttaagtttctccatgatttggttgaaataaccaatttcagcag gccatgtttaacctctttttgccatgtttgtttattaaaatctttaaccaatttcattagg |
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Protein
| Protein ID | habu1_s5205_g15383.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15383.t1 MRGSAPCAGRGVAGKRQRRSRPTTSWPSSREVTGEDDRMSPGYCNCHKYESVSKSLNFDRMAMEMLRWLTSRKLSGMATR RLTDAYLLLRNNAIQSRQLLAEQLADDRMALVSGISLDPEAAVCVSKRLPPKWIDGIEEIQYEISRIKQKMKELASLHDK HLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQGLHNKSRSCTNQECRLLKNVVCSLAQSLQDLSTSFRHGQSDYLK RMKNREERSKHFFDTSVSLMDDGEDTTLYDRGFTDDQLVLVEQNTILVEEREREIRQVIQSITDLNEIFRDLGAMVVEQG TVLDRIDYNVEQSCIKTEEGLKQLHKAEQYQKKNRKMLIILILFVIVIVLIIVLIAVKFR |
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