Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5205_g15384
Locus habu1_scaffold5205 : 360816 ... 379669 : +
To GenomeBrowser habu1_scaffold5205:360816..379669
Genes list of scaffold habu1_scaffold5205

Annotation by Blast2GO
Annotation GO
probable aminopeptidase npepl1 EC:3.4.11.0 GO:0004177 GO:0005634 GO:0005737 GO:0006508 GO:0008235 GO:0030145

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s5205_g15384.t2 1 1 Peptidase_M17 178 495 0.0 291.8 0.0 0.0 289.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.9
Venom grand-1 4.6
Pit, infrared sensing 5.8
Nose 7.3
Brain-1 5.6
Eye 4.7
fetal fibroblast 23.1
venom gland-2 10.3
Brain-2 5.3
Spleen 5.8
Lung 7.0
Liver 10.7
Kidney 10.4
Pancreas 6.4
Small intestine 7.9
Large intestine 5.6
Stomach 5.8
heart 6.8
ovary 27.6
cheek muscle 15.7

Transcript
Transcript IDhabu1_s5205_g15384.t1
Definition-
>habu1_s5205_g15384.t1
ggccttctcctcctcctcctcctccctccttccgcgcctgtccttcttcttgcggccgcgggaggcaggcgcggcacctg
cctgggaggagccgccgcgccgcgggcaggaagatggcgagcgtgcagctggagttccaggccagcgctggcgaggcgga
cccgcaaagccgcccggtgctggtgctgggccagttgcagaacctacaccggctgccgtgggctcacgtgcggggcaagc
tgcagcccagggtgaccgaggagatatggcaagcggcattaaatactttgaaccccaaccccaccgacagctgtcccctc
tacctgaatcatgccacagtagctgctttaccttcccgggtgagtcgacataacagcccgtctgctgctcagttcctgac
tcgggttatccgaacgtgcttgcctggaggaaccaagagatgcatccttatggtgtgtgagcgctcagaagtctttgctt
cagcttgtgccatagctcgggccttcccactcttcacccttcgctccagttcatctagacgtacagagaagaagactgtg
gttgtggagtttttcctagttgggcagaacaatggcccagtagaggttgagatgctgaaatgtctagaaaatgctacaga
aggggttagactggcagctcgaattgttgacaccccttgcaatgaaatgaacactgacaagttcctggaggaaatcagaa
aagtgggaaaagatttggggattgtcccaactatttttcaaaatgaagaactaaaggagaaaggatttggaggcatctat
ggggttggaaaagcagctattcacccacctgctctagctgtgctcagtcatactccagaaggagctacacagactattgc
ctgggttggaaagggcattgtctatgacactggaggactcagcatcaaaggaaagacaacaatgcctggaatgaaacgag
attgtggtggagctgctgctattttgggtgccttcaaggccactgtgaaacaaggctttaaagacaatcttcatgcagtg
ttttgcttggctgagaattctgttggaccaaatgcaacaagacctgatgacattcatgttctttactcgggaaaaactgt
ggaaatcaacaatactgatgctgaggggcgtctggtgcttgccgatggtgtctcctacgcttgcaaggaccttggggctg
acatcattcttgacatggccacactcacaggtgctcagggaatcgccacggggaagtaccacgcggctgtcctcaccaat
aacgaacagtgggaacaggcctgtatcaaagcaggcagaaactgtggtgatctggttcatcccctcgtctattgcccaga
gctccattttagtgaatttacctccgccgtagccgacatgaagaactcagtggcagaccgggataactctcccagctcct
gtgctggactttttattgcttcacacatcgggtttgattggcctggtgtttgggtccacatagacattgcagctcccgtc
catgcgggggaacgagccactggctacggtgagcaggaactagagagggaagatttggaaggaacagtgactgtcttgcc
ctgcatcacactgggaaatgcgaagcccaacatctgcttaagttgtaaagtggcaatcttggataagaatcactttgggc
tctgctgtagcccatgacaataatggaggccttcatctctttctttaaaaataggttttaaacaaaattctcccccatat
gctcttcttgcatgattattttatcagttgtgatccagtgcacatctccatgaagttcttaatatgcttgtgctgatgaa
ttacattaatgtttagaattaaagaccatgcaggaggtaaccatgccagaataaagctgctcttgtttcaacattgg
Transcript IDhabu1_s5205_g15384.t2
Definition-
>habu1_s5205_g15384.t2
ggccttctcctcctcctcctcctccctccttccgcgcctgtccttcttcttgcggccgcgggaggcaggcgcggcacctg
cctgggaggagccgccgcgccgcgggcaggaagatggcgagcgtgcagctggagttccaggccagcgctggcgaggcgga
cccgcaaagccgcccggtgctggtgctgggccagttgcagaacctacaccggctgccgtgggctcacgtgcggggcaagc
tgcagcccagggtgaccgaggagatatggcaagcggcattaaatactttgaaccccaaccccaccgacagctgtcccctc
tacctgaatcatgccacagtagctgctttaccttcccgggtgagtcgacataacagcccgtctgctgctcagttcctgac
tcgggttatccgaacgtgcttgcctggaggaaccaagagatgcatccttatggtgtgtgagcgctcagaagtctttgctt
cagcttgtgccatagctcgggccttcccactcttcacccttcgctccagttcatctagacgtacagagaagaagactgtg
gttgtggagtttttcctagttgggcagaacaatggcccagtagaggttgagatgctgaaatgtctagaaaatgctacaga
aggggttagactggcagctcgaattgttgacaccccttgcaatgaaatgaacactgacaagttcctggaggaaatcagaa
aagtgggaaaagatttggggattgtcccaactatttttcaaaatgaagaactaaaggagaaaggatttggaggcatctat
ggggttggaaaagcagctattcacccacctgctctagctgtgctcagtcatactccagaaggagctacacagactattgc
ctgggttggaaagggcattgtctatgacactggaggactcagcatcaaaggaaagacaacaatgcctggaatgaaacgag
attgtggtggagctgctgctattttgggtgccttcaaggccactgtgaaacaaggctttaaagacaatcttcatgcagtg
ttttgcttggctgagaattctgttggaccaaatgcaacaagacctgatgacattcatgttctttactcgggaaaaactgt
ggaaatcaacaatactgatgctgaggggcgtctggtgcttgccgatggtgtctcctacgcttgcaaggaccttggggctg
acatcattcttgacatggccacactcacaggtgctcaggttcccaatagttcaggaacactgatttatctacagcatctg
ttcaggggaatcgccacggggaagtaccacgcggctgtcctcaccaataacgaacagtgggaacaggcctgtatcaaagc
aggcagaaactgtggtgatctggttcatcccctcgtctattgcccagagctccattttagtgaatttacctccgccgtag
ccgacatgaagaactcagtggcagaccgggataactctcccagctcctgtgctggactttttattgcttcacacatcggg
tttgattggcctggtgtttgggtccacatagacattgcagctcccgtccatgcgggggaacgagccactggctacggtga
gcaggaactagagagggaagatttggaaggaacagtgactgtcttgccctgcatcacactgggaaatgcgaagcccaaca
tctgcttaagttgtaaagtggcaatcttggataagaatcactttgggctctgctgtagcccatgacaataatggaggcct
tcatctctttctttaaaaataggttttaaacaaaattctcccccatatgctcttcttgcatgattattttatcagttgtg
atccagtgcacatctccatgaagttcttaatatgcttgtgctgatgaattacattaatgtttagaattaaagaccatgca
ggaggtaaccatgccagaataaagctgctcttgtttcaacattgg

Protein
Protein IDhabu1_s5205_g15384.t1
Definition-
>habu1_s5205_g15384.t1
MASVQLEFQASAGEADPQSRPVLVLGQLQNLHRLPWAHVRGKLQPRVTEEIWQAALNTLNPNPTDSCPLYLNHATVAALP
SRVSRHNSPSAAQFLTRVIRTCLPGGTKRCILMVCERSEVFASACAIARAFPLFTLRSSSSRRTEKKTVVVEFFLVGQNN
GPVEVEMLKCLENATEGVRLAARIVDTPCNEMNTDKFLEEIRKVGKDLGIVPTIFQNEELKEKGFGGIYGVGKAAIHPPA
LAVLSHTPEGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAILGAFKATVKQGFKDNLHAVFCLAENSVGPN
ATRPDDIHVLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKYHAAVLTNNEQWEQACIKA
GRNCGDLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHIDIAAPVHAGERATGYGE
QELEREDLEGTVTVLPCITLGNAKPNICLSCKVAILDKNHFGLCCSP
Protein IDhabu1_s5205_g15384.t2
Definition-
>habu1_s5205_g15384.t2
MASVQLEFQASAGEADPQSRPVLVLGQLQNLHRLPWAHVRGKLQPRVTEEIWQAALNTLNPNPTDSCPLYLNHATVAALP
SRVSRHNSPSAAQFLTRVIRTCLPGGTKRCILMVCERSEVFASACAIARAFPLFTLRSSSSRRTEKKTVVVEFFLVGQNN
GPVEVEMLKCLENATEGVRLAARIVDTPCNEMNTDKFLEEIRKVGKDLGIVPTIFQNEELKEKGFGGIYGVGKAAIHPPA
LAVLSHTPEGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAILGAFKATVKQGFKDNLHAVFCLAENSVGPN
ATRPDDIHVLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQVPNSSGTLIYLQHLFRGIATGKYHA
AVLTNNEQWEQACIKAGRNCGDLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHID
IAAPVHAGERATGYGEQELEREDLEGTVTVLPCITLGNAKPNICLSCKVAILDKNHFGLCCSP

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Okinawa Institute of Science and Technology
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