Gene
| Gene Model ID | habu1_s5205_g15386 |
|---|---|
| Locus | habu1_scaffold5205 : 457950 ... 552850 : + |
| To GenomeBrowser | habu1_scaffold5205:457950..552850 |
| Genes list of scaffold | habu1_scaffold5205 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein g subunit alpha-like | GO:0000166 GO:0001501 GO:0007186 GO:0009653 GO:0044237 GO:0048513 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5205_g15386.t1 | 1 | 1 | G-alpha | 30 | 93 | 4.8e-16 | 58.4 | 1.8e-19 | 5.5e-16 | 58.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5205_g15386.t1 | gi|602658338|ref|XP_007434873.1| | PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like [Python bivittatus] | 0.0 |
| habu1_s5205_g15386.t1 | gi|558172499|ref|XP_006125387.1| | PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas [Pelodiscus sinensis] | 4.0e-31 |
| habu1_s5205_g15386.t1 | gi|611979181|ref|XP_007475727.1| | PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas isoform X2 [Monodelphis domestica] | 6.0e-31 |
| habu1_s5205_g15386.t1 | gi|611979183|ref|XP_007475728.1| | PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas isoform X3 [Monodelphis domestica] | 2.0e-30 |
| habu1_s5205_g15386.t1 | gi|611979179|ref|XP_007475726.1| | PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas isoform X1 [Monodelphis domestica] | 7.0e-30 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.0 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.1 |
| Spleen | 0.4 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s5205_g15386.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15386.t1 gtgtagaaaacggagcgtgcggaaaaggacgcgctcccctctccgcagcatggggatgtgctacagcctccgctccgggg gagaccacctgcccatccccgcctaccccacaggcggagacgcggcggagctacaagccgccaagaaggagagcagcaaa atcaaagaaaaagcggatcggaagcgcagcaaaaacatcgacaagtccctaaaagccgagaagagggagtacaagcagac gcacaggctgcttttgttaggtgctggcgaatctggtaaaagcacaattgtcaaacaaatgcggatcttgcacgtcaatg gatttaatgcagatttcactggtcatgctaaaattcagtatcgactgaaatgcagtggcatcatcccgttttcacgctgt gtggcggtgtctcgttttcacatggcacagctgcgctaccacgagtggggtgtctaggtttggtaaaatattttttttga aaaaactaaccaaaatgtccatttaaaactcagtaggttattgaaacattatgagttgcacaatgagttttagcaatttt ctcaatattaatgaccagctattaagatggatagcctggggttaaatgctttagcctgctgattttttttctcttttctg ttttgatagtaagcattcagtaataaatatgaagttaagtcaaacagtt |
|
Protein
| Protein ID | habu1_s5205_g15386.t1 |
|---|---|
| Definition | - |
>habu1_s5205_g15386.t1 MGMCYSLRSGGDHLPIPAYPTGGDAAELQAAKKESSKIKEKADRKRSKNIDKSLKAEKREYKQTHRLLLLGAGESGKSTI VKQMRILHVNGFNADFTGHAKIQYRLKCSGIIPFSRCVAVSRFHMAQLRYHEWGV |
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