Gene
| Gene Model ID | habu1_s536_g02461 |
|---|---|
| Locus | habu1_scaffold536 : 1 ... 57645 : - |
| To GenomeBrowser | habu1_scaffold536:1..57645 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alkylated dna repair protein alkb homolog 8 | EC:1.14.11.0 EC:2.1.1.0 GO:0000166 GO:0003676 GO:0008168 GO:0016706 GO:0032259 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02461.t1 | 1 | 1 | RRM_1 | 119 | 174 | 8.8e-06 | 25.2 | 8.1e-09 | 2.0e-05 | 24.1 |
| habu1_s536_g02461.t1 | 1 | 1 | 2OG-FeII_Oxy_2 | 232 | 404 | 5.2e-23 | 81.8 | 3.8e-26 | 9.3e-23 | 81.0 |
| habu1_s536_g02461.t1 | 1 | 1 | 2OG-FeII_Oxy | 291 | 404 | 1.3e-10 | 41.4 | 1.3e-13 | 3.3e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02461.t1 | gi|602667684|ref|XP_007439400.1| | PREDICTED: alkylated DNA repair protein alkB homolog 8-like, partial [Python bivittatus] | 0.0 |
| habu1_s536_g02461.t1 | gi|641777480|ref|XP_008171866.1| | PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X4 [Chrysemys picta bellii] | 0.0 |
| habu1_s536_g02461.t1 | gi|564265670|ref|XP_006271665.1| | PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Alligator mississippiensis] | 0.0 |
| habu1_s536_g02461.t1 | gi|557267249|ref|XP_006019012.1| | PREDICTED: alkylated DNA repair protein alkB homolog 8 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.4 |
| Venom grand-1 | 1.1 |
| Pit, infrared sensing | 1.8 |
| Nose | 1.4 |
| Brain-1 | 1.3 |
| Eye | 1.9 |
| fetal fibroblast | 3.3 |
| venom gland-2 | 1.3 |
| Brain-2 | 0.9 |
| Spleen | 2.1 |
| Lung | 1.7 |
| Liver | 2.2 |
| Kidney | 1.9 |
| Pancreas | 3.3 |
| Small intestine | 2.3 |
| Large intestine | 1.6 |
| Stomach | 2.5 |
| heart | 2.2 |
| ovary | 43.4 |
| cheek muscle | 3.1 |
Transcript
| Transcript ID | habu1_s536_g02461.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02461.t1 agtcgaggactaaaccggtcataagtcgaggactacccaaccggtcgccaatgtaccttaaagcagggggctccaacctc agcaactttaagacttgtggacttcaactctcagaattccctagtcagcatggagacccctgccttaaaggcttattgca ggttgaaaagaaggagatctttgttatgaagttatatgttcagttctcacaggaatcccatttttggcacttcctacttg ttcctttcagtatggaactagatgacatcactctacagaacaagaaactaagcaaagtagaaaaaaagttgcgacaaaaa cagatgaaggccagatacaccttactaaggcatgagggtattgagtgtgtatcataccctactaagagtctggttattgc caatggaggtctgggtaatggtgttggcagatgccagttgcactctctggtggaagaatgtggacaagtagaaagcctat taatgcctccaaataaaccctattcatttgtgcagtatgaaaggacagcttactccaagcaggcctatgattccctcaat ggaaaggaactaatattagacaactccagccaaaaggttgttctgtacttcaactatgtagaaaaagttccttgggaaga aatgagccctccagccttgcctcctggtttgagagtaattgaagaattggtttcacctgaagaagaaaagatgctcctgg aaaacattaattggacagaggatgaggtcattcccctggctcagaagtctttaaaacataggagggtaaaacattttgga tatgaatttcgatatgataacaacaatgttgatcgagacaaaccattacctggaggtctcccagatttttgtaacacaat tcttgcaaaatgtctgaaaatgggatacattaaccataaacctgatcaactgactataaatcagtatgaacctggacaag gaatccctcctcatattgatactcattctgcttttgaagatgaaataatatctctaagtttaggagctgagattgttatg gattttaaacatcctgatggatgcacagttgcagtgttgctgcctcagcgtagtttgctagtgatgtctggagaatccag atacctctggacccatggcattacaccaaggaaatttgacgttgttcaagcatcagaagtagagaacattggaagcatca ctgctgacatcagaaagttaaccttaaacaaaaggggaaagagaatatctttcacttttcggaaaataaagagaaatcct tgttgctgctcatttccttctgtatgcgacagtcggcataaagagagggtaccctcatttcacgacagcgacaaagatgc ctctgtgctagagcagaagtacgtccatgaagtgtatgaagatattgccagacatttcagcagcaccaggcatagtccat ggccacaagtgcttgagttccttaaaggtttgccatgtggggctattgtggctgatgttggatgtggcaatggaaagtac ttaggcatctgcaaagacttgtatatgccactcccagccaacgcccagccaatgggccacgcccagccaatgggccacac ccatctggcacttgacgatgcataagtgggttttgggttgcagtttgggcactcggtctctaaaaggttcgccatcactg agataggacatggcacccagcaggcactgcaggaggtatccctgaggaccatactagagttttaagctgtaagtgtgagg cagaaatatcaagcttgtttgtttcttgcacaaaaactacttgggattcagtctggggcttccttttcaaatctccttcg ttctatagctgctgctgtcaagttgatagtgatagtacagtagaggtgcttctgctacaatcctgctggatttccaaagc tatccacaaagtcatttgatgcgatctgaaggtcaaatgagagtgctacagtgctccttttcttgaggttgaaaattaaa ttgatctctcctgctgtgtgtttccatgctattttgaactgggctgtgataggaaacatacagttggtagtaaattaata aacccaattcagactgtctctgaactttttactgattggaaaaaagggaggaatgcaactaccgtattttccggcgtata agacgactgggcgtataagacgacccccaacttttccagttaaaatttagagtttgggctatatcaggggtaggcaaccc aaaacactcaaagcgccacttggacatgtttcccaccgaaaacaaaacactgggagccgcaaa |
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Protein
| Protein ID | habu1_s536_g02461.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02461.t1 MYLKAGGSNLSNFKTCGLQLSEFPSQHGDPCLKGLLQVEKKEIFVMKLYVQFSQESHFWHFLLVPFSMELDDITLQNKKL SKVEKKLRQKQMKARYTLLRHEGIECVSYPTKSLVIANGGLGNGVGRCQLHSLVEECGQVESLLMPPNKPYSFVQYERTA YSKQAYDSLNGKELILDNSSQKVVLYFNYVEKVPWEEMSPPALPPGLRVIEELVSPEEEKMLLENINWTEDEVIPLAQKS LKHRRVKHFGYEFRYDNNNVDRDKPLPGGLPDFCNTILAKCLKMGYINHKPDQLTINQYEPGQGIPPHIDTHSAFEDEII SLSLGAEIVMDFKHPDGCTVAVLLPQRSLLVMSGESRYLWTHGITPRKFDVVQASEVENIGSITADIRKLTLNKRGKRIS FTFRKIKRNPCCCSFPSVCDSRHKERVPSFHDSDKDASVLEQKYVHEVYEDIARHFSSTRHSPWPQVLEFLKGLPCGAIV ADVGCGNGKYLGICKDLYMPLPANAQPMGHAQPMGHTHLALDDA |
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