Gene
| Gene Model ID | habu1_s536_g02462 |
|---|---|
| Locus | habu1_scaffold536 : 58566 ... 93791 : + |
| To GenomeBrowser | habu1_scaffold536:58566..93791 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| elmo domain-containing protein 1 isoform x1 | GO:0005096 GO:0005856 GO:0006909 GO:0043547 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02462.t3 | 1 | 1 | ELMO_CED12 | 110 | 297 | 0.0 | 160.4 | 0.0 | 0.0 | 159.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02462.t3 | gi|694835232|ref|XP_009475111.1| | PREDICTED: ELMO domain-containing protein 1 [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 3.2 |
| Brain-1 | 98.0 |
| Eye | 10.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 80.3 |
| Spleen | 0.9 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s536_g02462.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02462.t1 gagaggggggggaagagcagggattaccctttgcctccaaaagaccccctccccccgccttttagcaaaggtgggaaaga ggcgccgaggaagcatcagttacttctggagaagctgcttgcttgtgcctaactgaagatcatcgctatagctgaaatat aaaatcgccatcatgaagcactttctcagaatgcttgtccaggtatgcctgtacttctattgcaaatgcttatggcgctg cctgaaatttgtggtgcggaaactgaccggacgatgtgagctgcaaaggatttgctataatatcaagtctggagctgaaa gaaccttgaaaattgagacatcattgaggaattcaaaaaacaagttgctccaaaattccgttagtattcctcctgatgca attgaaaaaacggtagatgccatcatagaactgaaaacgattaatccagatgtaaaccctcagctaagtgtatccctgca agcctgccttttgcagattgtaggatacagaaatctgattgcggaagtggaaaagctgcgtcgagagcagtatgattctg aagaggatcagcatgaagaaatgcttctgaagctatggaaatgcttgaaacctgattctcctttggaagctcggatttcc aagcagtggtgtgaaattggtttccaaggtgatgatcctaaaacagattttagaggaatggggcttctggggttgtataa cttgctatactttgctgagcatgatggtcctgcagctcagcaaattctcttagactctcttcagccaaaatatagggaaa tcactaaagaggaaataagcaaatatagcaagactgaatgggagaagaaaaagtttgataaagctattggattttccttt gctattgttggcatcaacataacagaacttgcatacaacctgcttgtgagtggtgctctgaagacacattgctacaatgt tgctccagaagctccaacgttagcccatttccagcaaacattttgctacttgatgcatgaatttcataaattctggattg aagaggatcccctggacataatggagttcaaccgggtgcgagagaaattccacaaacggattatcaggcagctgcagaat ccgaatatggcgttatgccctcactttgctgcttcggaaagcttaatcaacctgtagccatccccatggtttgatttgga aacactgcctggttcttgtgttacaccaccatctagagataaattgctgatgtattgaatgatca |
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| Transcript ID | habu1_s536_g02462.t2 |
| Definition | - |
>habu1_s536_g02462.t2 gagaggggggggaagagcagggattaccctttgcctccaaaagaccccctccccccgccttttagcaaaggtgggaaaga ggcgccgaggaagcatcagttacttctggagaagctgcttgcttgtgcctaactgaagatcatcgctatagctgaaatat aaaatcgccatcatgaagcactttctcagaatgcttgtccaggtatgcctgtacttctattgcaaatgcttatggcgctg cctgaaatttgtggtgcggaaactgaccggacgatgtgagctgcaaaggatttgctataatatcaagtctggagctgaaa gaaccttgaaaattgagacatcattgaggaattcaaaaaacaagttgctccaaaattccgttagtattcctcctgatgca attgaaaaaacggtagatgccatcatagaactgaaaacgattaatccagatgtaaaccctcagctaagtgtatccctgca agcctgccttttgcagattgtaggatacagaaatctgattgcggaagtggaaaagctgcgtcgagagcagtatgattctg aagaggatcagcatgaagaaatgcttctgaagctatggaaatgcttgaaacctgattctcctttggaagctcggatttcc aagcagtggtgtgaaattggtttccaaggtgatgatcctaaaacagattttagaggaatggggcttctggggttgtataa cttgctatactttgctgagcatgatggtcctgcagctcagcaaattctcttagactctcttcagccaaaatatagcaaat atagcaagactgaatgggagaagaaaaagtttgataaagctattggattttcctttgctattgttggcatcaacataaca gaacttgcatacaacctgcttgtgagtggtgctctgaagacacattgctacaatgttgctccagaagctccaacgttagc ccatttccagcaaacattttgctacttgatgcatgaatttcataaattctggattgaagaggatcccctggacataatgg agttcaaccgggtgcgagagaaattccacaaacggattatcaggcagctgcagaatccgaatatggcgttatgccctcac tttgctgcttcggaaagcttaatcaacctgtagccatccccatggtttgatttggaaacactgcctggttcttgtgttac accaccatctagagataaattgctgatgtattgaatgatca |
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| Transcript ID | habu1_s536_g02462.t3 |
| Definition | - |
>habu1_s536_g02462.t3 gagaggggggggaagagcagggattaccctttgcctccaaaagaccccctccccccgccttttagcaaaggtgggaaaga ggcgccgaggaagcatcagttacttctggagaagctgcttgcttgtgcctaactgaagatcatcgctatagctgaaatat aaaatcgccatcatgaagcactttctcaggatttctacaagcaagaatttatactatatataaataaaccattgaaatga taacagccttaattgtatttaagtcaataccattttgctcctaaagaagatctccaatgccataagtttaagatggagga gtagtgtatcatttaaagaatgcttgtccaggtatgcctgtacttctattgcaaatgcttatggcgctgcctgaaatttg tggtgcggaaactgaccggacgatgtgagctgcaaaggatttgctataatatcaagtctggagctgaaagaaccttgaaa attgagacatcattgaggaattcaaaaaacaagttgctccaaaattccgttagtattcctcctgatgcaattgaaaaaac ggtagatgccatcatagaactgaaaacgattaatccagatgtaaaccctcagctaagtgtatccctgcaagcctgccttt tgcagattgtaggatacagaaatctgattgcggaagtggaaaagctgcgtcgagagcagtatgattctgaagaggatcag catgaagaaatgcttctgaagctatggaaatgcttgaaacctgattctcctttggaagctcggatttccaagcagtggtg tgaaattggtttccaaggtgatgatcctaaaacagattttagaggaatggggcttctggggttgtataacttgctatact ttgctgagcatgatggtcctgcagctcagcaaattctcttagactctcttcagccaaaatatagggaaatcactaaagag gaaataagcaaatatagcaagactgaatgggagaagaaaaagtttgataaagctattggattttcctttgctattgttgg catcaacataacagaacttgcatacaacctgcttgtgagtggtgctctgaagacacattgctacaatgttgctccagaag ctccaacgttagcccatttccagcaaacattttgctacttgatgcatgaatttcataaattctggattgaagaggatccc ctggacataatggagttcaaccgggtgcgagagaaattccacaaacggattatcaggcagctgcagaatccgaatatggc gttatgccctcactttgctgcttcggaaagcttaatcaacctgtagccatccccatggtttgatttggaaacactgcctg gttcttgtgttacaccaccatctagagataaattgctgatgtattgaatgatca |
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Protein
| Protein ID | habu1_s536_g02462.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02462.t1 MKHFLRMLVQVCLYFYCKCLWRCLKFVVRKLTGRCELQRICYNIKSGAERTLKIETSLRNSKNKLLQNSVSIPPDAIEKT VDAIIELKTINPDVNPQLSVSLQACLLQIVGYRNLIAEVEKLRREQYDSEEDQHEEMLLKLWKCLKPDSPLEARISKQWC EIGFQGDDPKTDFRGMGLLGLYNLLYFAEHDGPAAQQILLDSLQPKYREITKEEISKYSKTEWEKKKFDKAIGFSFAIVG INITELAYNLLVSGALKTHCYNVAPEAPTLAHFQQTFCYLMHEFHKFWIEEDPLDIMEFNRVREKFHKRIIRQLQNPNMA LCPHFAASESLINL |
|
| Protein ID | habu1_s536_g02462.t2 |
| Definition | - |
>habu1_s536_g02462.t2 MKHFLRMLVQVCLYFYCKCLWRCLKFVVRKLTGRCELQRICYNIKSGAERTLKIETSLRNSKNKLLQNSVSIPPDAIEKT VDAIIELKTINPDVNPQLSVSLQACLLQIVGYRNLIAEVEKLRREQYDSEEDQHEEMLLKLWKCLKPDSPLEARISKQWC EIGFQGDDPKTDFRGMGLLGLYNLLYFAEHDGPAAQQILLDSLQPKYSKYSKTEWEKKKFDKAIGFSFAIVGINITELAY NLLVSGALKTHCYNVAPEAPTLAHFQQTFCYLMHEFHKFWIEEDPLDIMEFNRVREKFHKRIIRQLQNPNMALCPHFAAS ESLINL |
|
| Protein ID | habu1_s536_g02462.t3 |
| Definition | - |
>habu1_s536_g02462.t3 MLVQVCLYFYCKCLWRCLKFVVRKLTGRCELQRICYNIKSGAERTLKIETSLRNSKNKLLQNSVSIPPDAIEKTVDAIIE LKTINPDVNPQLSVSLQACLLQIVGYRNLIAEVEKLRREQYDSEEDQHEEMLLKLWKCLKPDSPLEARISKQWCEIGFQG DDPKTDFRGMGLLGLYNLLYFAEHDGPAAQQILLDSLQPKYREITKEEISKYSKTEWEKKKFDKAIGFSFAIVGINITEL AYNLLVSGALKTHCYNVAPEAPTLAHFQQTFCYLMHEFHKFWIEEDPLDIMEFNRVREKFHKRIIRQLQNPNMALCPHFA ASESLINL |
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