Gene
| Gene Model ID | habu1_s536_g02466 |
|---|---|
| Locus | habu1_scaffold536 : 187106 ... 216663 : + |
| To GenomeBrowser | habu1_scaffold536:187106..216663 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cullin- partial | GO:0006511 GO:0031466 GO:0031625 GO:0046982 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02466.t2 | 1 | 1 | Cullin | 19 | 673 | 0.0 | 549.3 | 0.0 | 0.0 | 548.8 |
| habu1_s536_g02466.t2 | 1 | 1 | Cullin_Nedd8 | 708 | 774 | 7.1e-20 | 70.6 | 2.7e-23 | 2.0e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02466.t2 | gi|530592803|ref|XP_005290020.1| | PREDICTED: cullin-5 [Chrysemys picta bellii] | 0.0 |
| habu1_s536_g02466.t2 | gi|40254446|ref|NP_003469.2| | cullin-5 [Homo sapiens] | 0.0 |
| habu1_s536_g02466.t2 | gi|511889478|ref|XP_004764466.1| | PREDICTED: cullin-5 [Mustela putorius furo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 4.5 |
| Pit, infrared sensing | 3.9 |
| Nose | 3.2 |
| Brain-1 | 7.3 |
| Eye | 4.3 |
| fetal fibroblast | 10.8 |
| venom gland-2 | 5.5 |
| Brain-2 | 7.6 |
| Spleen | 3.0 |
| Lung | 1.9 |
| Liver | 1.3 |
| Kidney | 2.5 |
| Pancreas | 1.8 |
| Small intestine | 2.6 |
| Large intestine | 2.0 |
| Stomach | 2.8 |
| heart | 12.6 |
| ovary | 10.6 |
| cheek muscle | 35.1 |
Transcript
| Transcript ID | habu1_s536_g02466.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02466.t1 aagaatatggcggcgtctaatctcttaaagaataaaggatcacttcagtttgaagacaaatgggattttatgcgcccaat tgttctgaagcttttacgccaggaatctgttactaaacaacaatggtttgatctattttcagatgtccatggagtttgtc tgtgggatgataaaggcccagcaaaaatacatcaggctttgaaagaagatatccttgattttattaagcaagcacaagcg atgcactgggactaaatacagctaagcatcaaaaattctcagaacatacttccaaagagtgctgagccaccaagatgata ctgcattactgaaagcctatattgtagaatggcgtaaattcttcacacaatgtgatatcttacccaagccattttgtcag ttagagattactctcatgggtaaacaaggcagcaataaaaaatccaatgtagaagacagtattgtacggaagctcatgct ggatacctggaatgagtccatattttcaaacataaaaactcgccttcaagacagtgcaatgaagttggtccatgctgaac gtttaggagaagcatttgactctcaacttgtcattggtgttagagaatcttatgttaatctgtgttccaatcctgatgat aaactccagatttatcgggataattttgaaaaagcatacctagattcaacagagagattttacagaactcaagccccttc gtatttgcagcaaaatggtgtacagaattatatgaaatatgcagatgctaaattaaaggaagaagaaaaaagagcactac gatatttagaaacaaggcgtgaatgtaactctgtagaagcactcatggagtgctgtgtgaatgctttggtgacctccttt aaagagacaattttagctgaatgccaaggcatgatcaaacgcaatgaaacggaaaaattacatttaatgttttctttgat ggataaagttcctaatggaatagagcctatgttaaaagatttagaagagcatattgttaatgctggattagcagatatgg tggcagctgctgaaactattactactgattccgaaaaatatgtagaacaattgcttacactgtttaatagatttagcaaa ttagttaaagaagcttttcaagatgacccaagatttcttactgccagagataaagcatataaagcagttgttaatgatgc tacaatatttaaacttgaactaccattgaaacagaagggtgttggattgaaaactcagccagagtcgaagtgcccagagt tacttgcaaattattgtgatatgttattaagaaaaacaccactaagcaaaaaattaacctctgaagaaattgaagcaaaa cttaaagaagtgctattggtactcaagtatgtacagaacaaagatgtttttatgagataccacaaagctcatttaacaag gcgtcttatattggatatatcagcagacagcgaaatagaagagaacatggttgaatggctgcgagaagtaggtatgccag cagattatgtaaataaattggcaaggatgtttcaggatattaaggtgtctgaagatcttaaccaggccttcaaggaaatg cacaaaaataataaattggccctcccagctgattctgtgaatattaaaattttaaatgctggggcttggtccagaagttc tgaaaaagtttttgtatcactgccaacggaattagaagaccttatccctgaggttgaagagttttacaaaaagaaccaca gtggcaggaagcttcattggcatcatttaatgtccaatggaattataactttcaagaatgaagttggccagtatgacttg gaggttactacgtttcaattggctgtgctttttgcatggaatcaaagaccccgagaaaaaattagctttgaaaacctcaa actagcgaccgaacttccagatgctgagcttaggagaactttgtggtctcttgtagcatttccgaagttgaaacgtcagg ttttgctgtatgaacctcaagtcaattcacccaaagactttacagagggaactctcttctcagtgaaccaggagttcagc ttaataaaaaatgctaaagttcaaaaaagaggtaaaataaaccttattggtagattgcagttaacaacagagagaatgcg agaagaagagaatgaagggatagtccagttaagaatattacgaacccaggaggctatcatccaaataatgaaaatgcgga agaaaattactaatgctcagcttcagactgaattagtagagatattaaaaaatatgttcttgccgcagaagaaaatgata aaagagcaaattgaatggcttatagaacacaaatatatcagaagagatgaatctgatatcaatacgtttatatacatggc atagcctaaggatttactggaaaatgccaagaaatgtgcattgggagtggtttgggcagaaaaaaaaatacaagaagact gtgctgtaaaaggacttgacctgcattacttaaattcctgccttaccttaccagaggactttattttgtcagtctctctc tctttttttcagttagcatgatggtgttcccctcatcttgtgcacatttttaacagcatggtggttttgtggggaaacca cattcatggagagcccattgtgagaatgttaggatttgatttgcacctggaagataacaaatctgggatttttatattac agaacttgcacaaagaaaatttttcagatattcatgcactgaaaaacttgttagttttcattttcacataaaaaagagag aagcaaatagattagatgtagcacttcatactttgttttttggaacaattgcctaaatatactatcctccttttgatctc ttccccatgtataatatttgaacaacacacaaatgtatcacatctgtagatacatatttatctgttagcttaaacaaacg tttcagtatgaaaattggattggaatactgggatactagtaatcctaacaggatatattacatatgtcacatagtttgct tcaatctcccccccccctttatttttttaaatatttactttattcatggaaagatctgttcgtagtggaaaaatattaaa tgtatttgtttatacatttaat |
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| Transcript ID | habu1_s536_g02466.t2 |
| Definition | - |
>habu1_s536_g02466.t2 gcccgtctgagaccatgtaaacggagaccggcttcagcccgaaggccggccccgaagagcggggagggcgccggagctgc tggctcgggaaggccccgccgtgctccggaacgcgcgtgggctgggggcgaagaatatggcggcgtctaatctcttaaag aataaaggatcacttcagtttgaagacaaatgggattttatgcgcccaattgttctgaagcttttacgccaggaatctgt tactaaacaacaatggtttgatctattttcagatgtccatggagtttgtctgtgggatgataaaggcccagcaaaaatac atcaggctttgaaagaagatatccttgattttattaagcaagcacaagcgagagtgctgagccaccaagatgatactgca ttactgaaagcctatattgtagaatggcgtaaattcttcacacaatgtgatatcttacccaagccattttgtcagttaga gattactctcatgggtaaacaaggcagcaataaaaaatccaatgtagaagacagtattgtacggaagctcatgctggata cctggaatgagtccatattttcaaacataaaaactcgccttcaagacagtgcaatgaagttggtccatgctgaacgttta ggagaagcatttgactctcaacttgtcattggtgttagagaatcttatgttaatctgtgttccaatcctgatgataaact ccagatttatcgggataattttgaaaaagcatacctagattcaacagagagattttacagaactcaagccccttcgtatt tgcagcaaaatggtgtacagaattatatgaaatatgcagatgctaaattaaaggaagaagaaaaaagagcactacgatat ttagaaacaaggcgtgaatgtaactctgtagaagcactcatggagtgctgtgtgaatgctttggtgacctcctttaaaga gacaattttagctgaatgccaaggcatgatcaaacgcaatgaaacggaaaaattacatttaatgttttctttgatggata aagttcctaatggaatagagcctatgttaaaagatttagaagagcatattgttaatgctggattagcagatatggtggca gctgctgaaactattactactgattccgaaaaatatgtagaacaattgcttacactgtttaatagatttagcaaattagt taaagaagcttttcaagatgacccaagatttcttactgccagagataaagcatataaagcagttgttaatgatgctacaa tatttaaacttgaactaccattgaaacagaagggtgttggattgaaaactcagccagagtcgaagtgcccagagttactt gcaaattattgtgatatgttattaagaaaaacaccactaagcaaaaaattaacctctgaagaaattgaagcaaaacttaa agaagtgctattggtactcaagtatgtacagaacaaagatgtttttatgagataccacaaagctcatttaacaaggcgtc ttatattggatatatcagcagacagcgaaatagaagagaacatggttgaatggctgcgagaagtaggtatgccagcagat tatgtaaataaattggcaaggatgtttcaggatattaaggtgtctgaagatcttaaccaggccttcaaggaaatgcacaa aaataataaattggccctcccagctgattctgtgaatattaaaattttaaatgctggggcttggtccagaagttctgaaa aagtttttgtatcactgccaacggaattagaagaccttatccctgaggttgaagagttttacaaaaagaaccacagtggc aggaagcttcattggcatcatttaatgtccaatggaattataactttcaagaatgaagttggccagtatgacttggaggt tactacgtttcaattggctgtgctttttgcatggaatcaaagaccccgagaaaaaattagctttgaaaacctcaaactag cgaccgaacttccagatgctgagcttaggagaactttgtggtctcttgtagcatttccgaagttgaaacgtcaggttttg ctgtatgaacctcaagtcaattcacccaaagactttacagagggaactctcttctcagtgaaccaggagttcagcttaat aaaaaatgctaaagttcaaaaaagaggtaaaataaaccttattggtagattgcagttaacaacagagagaatgcgagaag aagagaatgaagggatagtccagttaagaatattacgaacccaggaggctatcatccaaataatgaaaatgcggaagaaa attactaatgctcagcttcagactgaattagtagagatattaaaaaatatgttcttgccgcagaagaaaatgataaaaga gcaaattgaatggcttatagaacacaaatatatcagaagagatgaatctgatatcaatacgtttatatacatggcatagc ctaaggatttactggaaaatgccaagaaatgtgcattgggagtggtttgggcagaaaaaaaaatacaagaagactgtgct gtaaaaggacttgacctgcattacttaaattcctgccttaccttaccagaggactttattttgtcagtctctctctcttt ttttcagttagcatgatggtgttcccctcatcttgtgcacatttttaacagcatggtggttttgtggggaaaccacattc atggagagcccattgtgagaatgttaggatttgatttgcacctggaagataacaaatctgggatttttatattacagaac ttgcacaaagaaaatttttcagatattcatgcactgaaaaacttgttagttttcattttcacataaaaaagagagaagca aatagattagatgtagcacttcatactttgttttttggaacaattgcctaaatatactatcctccttttgatctcttccc catgtataatatttgaacaacacacaaatgtatcacatctgtagatacatatttatctgttagcttaaacaaacgtttca gtatgaaaattggattggaatactgggatactagtaatcctaacaggatatattacatatgtcacatagtttgcttcaat ctcccccccccctttatttttttaaatatttactttattcatggaaagatctgttcgtagtggaaaaatattaaatgtat ttgtttatacatttaat |
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Protein
| Protein ID | habu1_s536_g02466.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02466.t1 MGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKTRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPDDKLQIY RDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETIL AECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIVNAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEA FQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL LVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNK LALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTF QLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNA KVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIE WLIEHKYIRRDESDINTFIYMA |
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| Protein ID | habu1_s536_g02466.t2 |
| Definition | - |
>habu1_s536_g02466.t2 MAASNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHGVCLWDDKGPAKIHQALKEDILDFIKQAQARV LSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKTRLQDSAM KLVHAERLGEAFDSQLVIGVRESYVNLCSNPDDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKE EEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIVN AGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEE FYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF PKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA |
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