Gene
| Gene Model ID | habu1_s536_g02467 |
|---|---|
| Locus | habu1_scaffold536 : 223766 ... 237368 : + |
| To GenomeBrowser | habu1_scaffold536:223766..237368 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acetyl- mitochondrial isoform x1 | EC:2.3.1.9 GO:0003985 GO:0005743 GO:0006090 GO:0006550 GO:0006552 GO:0006554 GO:0006568 GO:0006574 GO:0006633 GO:0018874 GO:0042967 GO:0046950 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02467.t1 | 1 | 1 | Thiolase_N | 28 | 286 | 0.0 | 343.9 | 0.0 | 0.0 | 343.3 |
| habu1_s536_g02467.t1 | 1 | 1 | Thiolase_C | 295 | 414 | 1.4013e-45 | 154.2 | 0.0 | 1.4013e-45 | 153.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02467.t1 | gi|602664793|ref|XP_007438011.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s536_g02467.t1 | gi|327287664|ref|XP_003228548.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02467.t1 | gi|637362044|ref|XP_008120414.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02467.t1 | gi|683898243|ref|XP_009101047.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial isoform X1 [Serinus canaria] | 0.0 |
| habu1_s536_g02467.t1 | gi|729748739|ref|XP_010570891.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 18.2 |
| Venom grand-1 | 30.7 |
| Pit, infrared sensing | 23.8 |
| Nose | 29.6 |
| Brain-1 | 25.3 |
| Eye | 28.2 |
| fetal fibroblast | 51.5 |
| venom gland-2 | 63.9 |
| Brain-2 | 33.5 |
| Spleen | 21.9 |
| Lung | 13.6 |
| Liver | 58.9 |
| Kidney | 49.8 |
| Pancreas | 56.6 |
| Small intestine | 11.4 |
| Large intestine | 19.4 |
| Stomach | 35.4 |
| heart | 219.9 |
| ovary | 85.3 |
| cheek muscle | 130.2 |
Transcript
| Transcript ID | habu1_s536_g02467.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02467.t1 gaggtgctcccttctggttccagttggtgaggtggttgaagtcggcgccgggatgcagtgcggacggcaggtagcgaagc cccttctggcattaagattttcaagccgaagctactcagcacaacgtggtttaaatgaagtagttattgtaagtgctgtc cggacaccaataggatctttccaaggttcccttttcccactgccagccactaaccttggctccattgcaattaaaggagc aatagaaaaagcaggtatcccttctcaagaagtgaaggaagtatacatgggaaatgttatccaagccggagaaggacagg ctcctgcaagacaagcgacccttggcgccggcttaccagtttctactccttgcacaactgtcaacaaagtttgtgcttct ggaatgaaatctattatgatggcagcccagagtttgatgtgtgggagtcaggatgtgatggtagctggtgggatggaaag catgtcaaatgtcccctacacaatgaccagaggaacaaccccttatggaggtgtaaagcttgaagatttgattgtcaaag atggcttgacagatgtttacaacaagatccacatgggtagttgtgctgagaatactgctaagaaattttctatatcacgg gaagatcaagatacttatgctataaagtcctatacccaaagcaaggaaggttggaattctggcatatttgcaaaggaaat tgtgcctgtcactatttctcagaaagggaaaccagacgcagaggttaaagaagatgaggaatataagcgtgttgacttta gtaaagttccaaaattgaaggcggttttccaaaaagaaaatggaacggtcacagctgccaatgctagtacgctaaatgat ggagcagctgctttggtactgatgacttcagaagcagccaaaagactgaatgtgaagccattggcaagaatagtaggttt tgcagatgctgctgttgatcctattgattttcccattgcaccagcacatgctgttcctaaggtacttgctcaggcaggac tcaaaaaggaagatattaatatgtgggaaatcaatgaagcattcagtgttgttgtcttagctaacattaaaatgctagac attgatccacagaaggtaaatattcacggaggagcagtttctttgggacatccaattgggatgtctggtgcaagaatagt tgttcacatggctcatgccttgaagcaaggagaacatggccttgctgggatttgcaatggtggtggtggggcatctgcaa tactgatccaaaagttataggttctgatctcaagctcaaggcccaacgtattcatagctgttacaaccatgattggaact gcagtagagaggatcatttcagtctgccactgttaaatgaaattatgtctttttattatgttttaatgcaaaatgttttt tttaatatcttggacagtaaaacatgttaattatcatccaacgctgcagatataactactttagatacttatcatacttt atattgccctgctctcatcactgaattgtaggcattcatttgctcttctcccttagcctcctaaaatgaaggcagtgggt tgtgccatgtgtatttttgctcagaaaactactgcttgtttggaggaagatagtataaaggtaatactggattatgtttc cacaattggtagaaacaaaacaagaagggctactgaataaatatttaccatacaacaataatg |
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Protein
| Protein ID | habu1_s536_g02467.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02467.t1 MQCGRQVAKPLLALRFSSRSYSAQRGLNEVVIVSAVRTPIGSFQGSLFPLPATNLGSIAIKGAIEKAGIPSQEVKEVYMG NVIQAGEGQAPARQATLGAGLPVSTPCTTVNKVCASGMKSIMMAAQSLMCGSQDVMVAGGMESMSNVPYTMTRGTTPYGG VKLEDLIVKDGLTDVYNKIHMGSCAENTAKKFSISREDQDTYAIKSYTQSKEGWNSGIFAKEIVPVTISQKGKPDAEVKE DEEYKRVDFSKVPKLKAVFQKENGTVTAANASTLNDGAAALVLMTSEAAKRLNVKPLARIVGFADAAVDPIDFPIAPAHA VPKVLAQAGLKKEDINMWEINEAFSVVVLANIKMLDIDPQKVNIHGGAVSLGHPIGMSGARIVVHMAHALKQGEHGLAGI CNGGGGASAILIQKL |
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