Gene
| Gene Model ID | habu1_s536_g02472 |
|---|---|
| Locus | habu1_scaffold536 : 419980 ... 613866 : + |
| To GenomeBrowser | habu1_scaffold536:419980..613866 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable atp-dependent rna helicase ddx10 | GO:0004386 GO:0005524 GO:0008152 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02472.t2 | 1 | 1 | DEAD | 91 | 261 | 0.0 | 159.4 | 0.0 | 0.0 | 158.0 |
| habu1_s536_g02472.t2 | 1 | 1 | Helicase_C | 336 | 407 | 7.7e-21 | 73.7 | 7.1e-24 | 2.1e-20 | 72.3 |
| habu1_s536_g02472.t2 | 1 | 1 | DUF4217 | 448 | 511 | 1.8e-21 | 75.4 | 1.4e-24 | 4.1e-21 | 74.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 4.6 |
| Pit, infrared sensing | 5.7 |
| Nose | 4.3 |
| Brain-1 | 3.2 |
| Eye | 3.4 |
| fetal fibroblast | 15.2 |
| venom gland-2 | 6.2 |
| Brain-2 | 2.2 |
| Spleen | 7.6 |
| Lung | 4.6 |
| Liver | 13.8 |
| Kidney | 18.2 |
| Pancreas | 18.3 |
| Small intestine | 7.0 |
| Large intestine | 4.4 |
| Stomach | 9.4 |
| heart | 5.2 |
| ovary | 27.7 |
| cheek muscle | 9.5 |
Transcript
| Transcript ID | habu1_s536_g02472.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02472.t1 gtgttctggtcctcaattccacccagaagggatggaggagagtcggagagtcgtgtcgggttcgggcgccgacccggtgc gcaacttcgagcgttggaagaagaggtacgccaaacgcaaagacaagcagcggcaacagcgcaaacaaaagaaaccggag tgggaagtggagagggagtcaatcgccgctttggaaagacgctacacagagataaatacaaatgacattacaagattttc cgatttcccactatccaggaaaactctgaaaggcttacaggaggctcagtatcgcatggtgactgaaatccagaagcaga ccataggtttggcattgcagggtaaagatgtgttgggagctgccaagacaggatccggcaaaaccttggctttcattgta cctgctctagaaatcttataccgccagcagtggactgccatggatgaactgggcgttttgataatatctcctaccagaga attggcttaccagacgtttgaagtcctgcgtaaagtggggaagaatcatgaattttctgcaggtctaatcattggtggaa aggacttgaaacaagaatcaagcaaaatccataatatgaatatcctcatttgtactcctggtcgtcttttacaacacatg gatgaaacctcgtatttccatgcctccaatcttcaaatgctgatccttgatgaagctgatagaattctggatatgggctt cgctgataccatgaatgcaattatagagaaccttcccaaaaaacggcagaccctgcttttctcagccacgcagaccaaat ctgtgaaggaccttgctcggttgagcttgaaggatccagaatacatctgggtgcatgaaaaagcaaagttcagtactcca gcaactttggaacagaactacattgtttgtgaactgcaccagaaagtcaatatgttgtactcttttctgaaaactcacct gaataagaagagtattgtattttttgcaagctgtaaagaggtccagtacttgtttagagtattttgtcgccttcgtccgg gtctccctatactagctcttcatggcaaacaacaacagatgaaaagaatggaagtatatcaagattttttgcgcaagaaa tcggcagttctttttgctacggatcttgcagctcgtgggctagacttccctgctgtgaactgggtcattcaggttgactg cccagaagatgcaaatacatatattcacagagttgggagaacagccagatacaaagaaggtggtgaagctctcctcgttt tgcttccttcagaggaaaatggcatgattcagcagctgtcacagaaaaaagttcctgtcagcaatatcaaaatcaatcct gagaaacttttagatgtccagaagaaactgcagtccttactggctcaggatcaagatttgaaagaacgtgcacaacggtg ttttgtttcttacctgcgatctgtctatctcatgaagaacaaagaagtctttgatgtgttaaagttatccattgctgaat atgccctctctcttggacttgcagtggcccctcgtgtccgatttctccagaaagtccagaagaaaatgcatacaatggag cctgagaaagaggggactgagcaggctgagaacacacagttttctttaagtgatgaggacttggagaaatgcaggagaat tttctctagaacaggcatgttgggacaaaaagagacagaaggcctctctgggaaaagcagtcctgatgaagaagcattgc agagtccgtctgagctagaagaacttgcaaaagtccatgaatcaaaacctgaaagcctaaattttttcggagatgatgat gatgatgatgatgatgacaatgacaacgatgcctctaaggatgtgttgattgtaaaacggcgaaatgtatttggcttaga atcagaagagaaagcaccattggttacacagaatgtaaaagtgaagaagaaaataaccaagacaaaagaagctaaaaagg ttttgaagagaaattttaaagtaaatacaaaaattgtatttactgaagatggagagttaattcagcagtggccaccagca caaaaatctaccctggagaaagaggaagatggtgatgattgtaatgggatcaatctagacaaagcaaaagaaagacttca ggaagaggataaatttgacaaagaggaatataggaagaaaattaaagaaaaacacagggagaaaaggcttaaagaaaagg cagctagaagggaagccaggaagatgaatgcaaagattgaagaggacactgtagctcttctggatcacagtgacagtgat gaggaatttgatccaagtacacttccagatccagatggccccaaagatgacgaacaagaaattcttccaaaaagtcacag caaacgtggaatggataagcggcagttggatggaagcaaatcagaaggggaaacaccacaaaagaggaagaagataaaac ctaaccaagagggctcttttctaccattagatacagtgaaacacaagaatgaaggaaaaacctgtttccaagtttggatc attgtggcatcagaacaacaaggggctaaaggaccatgggggggaaaccaaagtcattctcccaagcacaatggtcaagg gtataatctctcaaatatttgtgaaacagggaagaatactgatattcatactgaagacatagttagaaaaacatgtcctt aaatttagcatagaggccagtcaaaatttatagtattaaacaatgaaaaataaagtgaataatgtaatacaaaata |
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| Transcript ID | habu1_s536_g02472.t2 |
| Definition | - |
>habu1_s536_g02472.t2 gtgttctggtcctcaattccacccagaagggatggaggagagtcggagagtcgtgtcgggttcgggcgccgacccggtgc gcaacttcgagcgttggaagaagaggtacgccaaacgcaaagacaagcagcggcaacagcgcaaacaaaagaaaccggag tgggaagtggagagggagtcaatcgccgctttggaaagacgctacacagagataaatacaaatgacattacaagattttc cgatttcccactatccaggaaaactctgaaaggcttacaggaggctcagtatcgcatggtgactgaaatccagaagcaga ccataggtttggcattgcagggtaaagatgtgttgggagctgccaagacaggatccggcaaaaccttggctttcattgta cctgctctagaaatcttataccgccagcagtggactgccatggatgaactgggcgttttgataatatctcctaccagaga attggcttaccagacgtttgaagtcctgcgtaaagtggggaagaatcatgaattttctgcaggtctaatcattggtggaa aggacttgaaacaagaatcaagcaaaatccataatatgaatatcctcatttgtactcctggtcgtcttttacaacacatg gatgaaacctcgtatttccatgcctccaatcttcaaatgctgatccttgatgaagctgatagaattctggatatgggctt cgctgataccatgaatgcaattatagagaaccttcccaaaaaacggcagaccctgcttttctcagccacgcagaccaaat ctgtgaaggaccttgctcggttgagcttgaaggatccagaatacatctgggtgcatgaaaaagcaaagttcagtactcca gcaactttggaacagaactacattgtttgtgaactgcaccagaaagtcaatatgttgtactcttttctgaaaactcacct gaataagaagagtattgtattttttgcaagctgtaaagaggtccagtacttgtttagagtattttgtcgccttcgtccgg gtctccctatactagctcttcatggcaaacaacaacagatgaaaagaatggaagtatatcaagattttttgcgcaagaaa tcggcagttctttttgctacggatcttgcagctcgtgggctagacttccctgctgtgaactgggtcattcaggttgactg cccagaagatgcaaatacatatattcacagagttgggagaacagccagatacaaagaaggtggtgaagctctcctcgttt tgcttccttcagaggaaaatggcatgattcagcagctgtcacagaaaaaagttcctgtcagcaatatcaaaatcaatcct gagaaacttttagatgtccagaagaaactgcagtccttactggctcaggatcaagatttgaaagaacgtgcacaacggtg ttttgtttcttacctgcgatctgtctatctcatgaagaacaaagaagtctttgatgtgttaaagttatccattgctgaat atgccctctctcttggacttgcagtggcccctcgtgtccgatttctccagaaagtccagaagaaaatgcatacaatggag cctgagaaagaggggactgagcaggctgagaacacacagttttctttaagtgatgaggacttggagaaatgcaggagaat tttctctagaacaggcatgttgggacaaaaagagacagaaggcctctctgggaaaagcagtcctgatgaagaagcattgc agagtccgtctgagctagaagaacttgcaaaagtccatgaatcaaaacctgaaagcctaaattttttcggagatgatgat gatgatgatgatgatgacaatgacaacgatgcctctaaggatgtgttgattgtaaaacggcgaaatgtatttggcttaga atcagaagagaaagcaccattggttacacagaatgtaaaagtgaagaagaaaataaccaagacaaaagaagctaaaaagg ttttgaagagaaattttaaagtaaatacaaaaattgtatttactgaagatggagagttaattcagcagtggccaccagca caaaaatctaccctggagaaagaggaagatggtgatgattgtaatgggatcaatctagacaaagcaaaagaaagacttca ggaagaggataaatttgacaaagaggaatataggaagaaaattaaagaaaaacacagggagaaaaggcttaaagaaaagg cagctagaagggaagccaggaagatgaatgcaaagattgaagaggacactgtagctcttctggatcacagtgacagtgat gaggaatttgatccaagtacacttccagatccagatggccccaaagatgacgaacaagaaattcttccaaaaagtcacag caaacgtggaatggataagcggcagttggatggaagcaaatcagaaggggaaacaccacaaaagaggaagaagataaaac ctaaccaagagggctcttttctaccattagatacagtgaaacacaagaatgaaggaaaaacctgtttccaagtttggatc attgtggcatcagaacaacaaggggctaaaggaccatgggggggaaaccaaagtcattctcccaagcacaatggtcaagg tgatggatttggcagtagtgttacagaccgatttaatagtaaagtaatggaaactgcagggtataatctctcaaatattt gtgaaacagggaagaatactgatattcatactgaagacatagttagaaaaacatgtccttaaatttagcatagaggccag tcaaaatttatagtattaaacaatgaaaaataaagtgaataatgtaatacaaaata |
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Protein
| Protein ID | habu1_s536_g02472.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02472.t1 MEESRRVVSGSGADPVRNFERWKKRYAKRKDKQRQQRKQKKPEWEVERESIAALERRYTEINTNDITRFSDFPLSRKTLK GLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIVPALEILYRQQWTAMDELGVLIISPTRELAYQTFEVLR KVGKNHEFSAGLIIGGKDLKQESSKIHNMNILICTPGRLLQHMDETSYFHASNLQMLILDEADRILDMGFADTMNAIIEN LPKKRQTLLFSATQTKSVKDLARLSLKDPEYIWVHEKAKFSTPATLEQNYIVCELHQKVNMLYSFLKTHLNKKSIVFFAS CKEVQYLFRVFCRLRPGLPILALHGKQQQMKRMEVYQDFLRKKSAVLFATDLAARGLDFPAVNWVIQVDCPEDANTYIHR VGRTARYKEGGEALLVLLPSEENGMIQQLSQKKVPVSNIKINPEKLLDVQKKLQSLLAQDQDLKERAQRCFVSYLRSVYL MKNKEVFDVLKLSIAEYALSLGLAVAPRVRFLQKVQKKMHTMEPEKEGTEQAENTQFSLSDEDLEKCRRIFSRTGMLGQK ETEGLSGKSSPDEEALQSPSELEELAKVHESKPESLNFFGDDDDDDDDDNDNDASKDVLIVKRRNVFGLESEEKAPLVTQ NVKVKKKITKTKEAKKVLKRNFKVNTKIVFTEDGELIQQWPPAQKSTLEKEEDGDDCNGINLDKAKERLQEEDKFDKEEY RKKIKEKHREKRLKEKAARREARKMNAKIEEDTVALLDHSDSDEEFDPSTLPDPDGPKDDEQEILPKSHSKRGMDKRQLD GSKSEGETPQKRKKIKPNQEGSFLPLDTVKHKNEGKTCFQVWIIVASEQQGAKGPWGGNQSHSPKHNGQGYNLSNICETG KNTDIHTEDIVRKTCP |
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| Protein ID | habu1_s536_g02472.t2 |
| Definition | - |
>habu1_s536_g02472.t2 MEESRRVVSGSGADPVRNFERWKKRYAKRKDKQRQQRKQKKPEWEVERESIAALERRYTEINTNDITRFSDFPLSRKTLK GLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIVPALEILYRQQWTAMDELGVLIISPTRELAYQTFEVLR KVGKNHEFSAGLIIGGKDLKQESSKIHNMNILICTPGRLLQHMDETSYFHASNLQMLILDEADRILDMGFADTMNAIIEN LPKKRQTLLFSATQTKSVKDLARLSLKDPEYIWVHEKAKFSTPATLEQNYIVCELHQKVNMLYSFLKTHLNKKSIVFFAS CKEVQYLFRVFCRLRPGLPILALHGKQQQMKRMEVYQDFLRKKSAVLFATDLAARGLDFPAVNWVIQVDCPEDANTYIHR VGRTARYKEGGEALLVLLPSEENGMIQQLSQKKVPVSNIKINPEKLLDVQKKLQSLLAQDQDLKERAQRCFVSYLRSVYL MKNKEVFDVLKLSIAEYALSLGLAVAPRVRFLQKVQKKMHTMEPEKEGTEQAENTQFSLSDEDLEKCRRIFSRTGMLGQK ETEGLSGKSSPDEEALQSPSELEELAKVHESKPESLNFFGDDDDDDDDDNDNDASKDVLIVKRRNVFGLESEEKAPLVTQ NVKVKKKITKTKEAKKVLKRNFKVNTKIVFTEDGELIQQWPPAQKSTLEKEEDGDDCNGINLDKAKERLQEEDKFDKEEY RKKIKEKHREKRLKEKAARREARKMNAKIEEDTVALLDHSDSDEEFDPSTLPDPDGPKDDEQEILPKSHSKRGMDKRQLD GSKSEGETPQKRKKIKPNQEGSFLPLDTVKHKNEGKTCFQVWIIVASEQQGAKGPWGGNQSHSPKHNGQGDGFGSSVTDR FNSKVMETAGYNLSNICETGKNTDIHTEDIVRKTCP |
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