Gene
| Gene Model ID | habu1_s536_g02481 |
|---|---|
| Locus | habu1_scaffold536 : 1133792 ... 1262961 : + |
| To GenomeBrowser | habu1_scaffold536:1133792..1262961 |
| Genes list of scaffold | habu1_scaffold536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02481.t1 | 2 | 1 | TUDOR | 172 | 285 | 7.70014e-42 | 141.9 | 1.1e-24 | 7.9e-21 | 74.1 |
| habu1_s536_g02481.t1 | 2 | 2 | TUDOR | 309 | 420 | 7.70014e-42 | 141.9 | 4.4e-19 | 3.2e-15 | 56.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02481.t1 | gi|507701563|ref|XP_004715465.1| | PREDICTED: RING finger protein 17 [Echinops telfairi] | 0.0 |
| habu1_s536_g02481.t1 | gi|602674097|ref|XP_007442542.1| | PREDICTED: RING finger protein 17-like, partial [Python bivittatus] | 0.0 |
| habu1_s536_g02481.t1 | gi|637285996|ref|XP_008106176.1| | PREDICTED: RING finger protein 17 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02481.t1 | gi|637285991|ref|XP_008106175.1| | PREDICTED: RING finger protein 17 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02481.t1 | gi|641751337|ref|XP_008167543.1| | PREDICTED: RING finger protein 17 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.2 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 9.2 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s536_g02481.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02481.t1 cgtgctagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtaggcaccttgcctctagcacggcaggagcagc tgggtccgatgacgctcgtgtctggttttgaaaatgacctggaaaagtctctgcagttttgttgctttcagaatgaattt tctgattggtcagaaaatgctgtaccactgcagtactatccacctgtgatgccacgggaaaatacagaggttgccgctgt tgttagttacattaatagccctggcgacttctacattcagctggatactgatttgtcacctttgcctgtaaaaatatttt gcaaagatgaacaaaactgtattgacgtttcggaatacatgatgaaagaaggcttagcacttagaaaaagagcacctaaa attcatccaaatcaagcttcctctgataaactacaaaagaatgtggacataaaccagctggtttcagaaaaagaaagccc ttctaaactggaaaagcattttgatccttcaaatactgatagtaagcaacaagaactgaaaatgtcagtggctaagcctc tagtggttgagacctataaactaccagctcttcctagctcggattgcttcagtgctacggttagctgtgtttcagataat ggaacaatttatgtgattcccacgtcacaagagcaaaagttaaaagagttaatgtgtaatatacaagataatgtcaaagg tttaggccttctgaaaccctataactggaaaaatggagaagcttgtgttgtaagaggagcagatacaatgtggtaccgag gtgaagttaaagatgttggcgctggcattgtaaaggtactttatatggactatggatatactgagaagattcctccatgc catctatatcccactattttgtatgctgagatacctccattttctataccatgtcagctgtataaaactgtaccagatat gctagaatccagtaatgaaaccttggaggaaaattgtgaaatcagttatgaggtctatatttccattgttcactcaaaca gtaccagccaacagagagagatggattctgacactctagagaaagccttggctcaatgtaatcagaacatagacactctt ccacgtccaactgattttcaaaaagacatgccctgcctcgcggaatatagtgatggtttgtggtatcgagcaaaactcat ttctattcttgagttcaatcctgtttcagtccttgtggaatttgttgactatggatcgactaaaacattgcccgcaagca ggttgcgtcagattcctcataagctcatgcaatatcctgctcaagcattcagagtgttactggctggatttaaacctgct ctaaatgattccgcaacagagagaattccttactgttcagaatggagcctagatgccttgtgggctgcaatgaactgctt tgaaggcaaaaacctcagtgcttcttcagtgacacatgcaccagagcatattatatttttatatgaagaaggacgtctct ttcatatgaagcttgtggaaatgggatttgcagaactgacacaatgatagatgcagactgcctcaattagaaaaaaattg aactggttgtgtactaaaactatctttatagttttatagtttttatagttatagttttttgtaaattctgggaatacata aaagtgttgagtttttgttaagttgttcaagtactgatggttgtttaaataaaaatagttggtgttgcatcaaaa |
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Protein
| Protein ID | habu1_s536_g02481.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02481.t1 MTLVSGFENDLEKSLQFCCFQNEFSDWSENAVPLQYYPPVMPRENTEVAAVVSYINSPGDFYIQLDTDLSPLPVKIFCKD EQNCIDVSEYMMKEGLALRKRAPKIHPNQASSDKLQKNVDINQLVSEKESPSKLEKHFDPSNTDSKQQELKMSVAKPLVV ETYKLPALPSSDCFSATVSCVSDNGTIYVIPTSQEQKLKELMCNIQDNVKGLGLLKPYNWKNGEACVVRGADTMWYRGEV KDVGAGIVKVLYMDYGYTEKIPPCHLYPTILYAEIPPFSIPCQLYKTVPDMLESSNETLEENCEISYEVYISIVHSNSTS QQREMDSDTLEKALAQCNQNIDTLPRPTDFQKDMPCLAEYSDGLWYRAKLISILEFNPVSVLVEFVDYGSTKTLPASRLR QIPHKLMQYPAQAFRVLLAGFKPALNDSATERIPYCSEWSLDALWAAMNCFEGKNLSASSVTHAPEHIIFLYEEGRLFHM KLVEMGFAELTQ |
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