Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s536_g02483
Locus habu1_scaffold536 : 1291622 ... 1341586 : +
To GenomeBrowser habu1_scaffold536:1291622..1341586
Genes list of scaffold habu1_scaffold536

Annotation by Blast2GO
Annotation GO
m-phase phosphoprotein partial EC:2.4.2.30 GO:0003950 GO:0005737 GO:0005876 GO:0006471 GO:0006954 GO:0008219 GO:0016020 GO:0019899 GO:0070062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s536_g02483.t1 1 1 BRCT 6 81 3.1e-09 36.8 6.4e-12 1.1e-08 35.1
habu1_s536_g02483.t1 1 1 PARP 381 568 1.4e-34 119.3 5.7e-37 9.3e-34 116.6
habu1_s536_g02483.t1 1 1 VIT_2 621 689 3.7e-15 55.1 5.2e-18 8.6e-15 53.9
habu1_s536_g02483.t1 1 1 VIT 622 736 2.9e-31 107.5 4.1e-34 6.7e-31 106.4
habu1_s536_g02483.t1 1 1 VWA_CoxE 878 987 3.8e-06 26.2 1.7e-08 2.8e-05 23.3
habu1_s536_g02483.t1 1 1 VWA_3 879 1029 6.1e-18 64.9 8.3e-21 1.4e-17 63.8
habu1_s536_g02483.t1 1 1 VWA 881 1038 3.1e-10 40.0 4.0e-13 6.6e-10 38.9
habu1_s536_g02483.t1 1 1 VWA_2 881 1026 1.2e-08 35.2 1.4e-11 2.4e-08 34.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s536_g02483.t1 gi|602668724|ref|XP_007439905.1| PREDICTED: poly [ADP-ribose] polymerase 4-like, partial [Python bivittatus] 0.0
habu1_s536_g02483.t1 gi|637286019|ref|XP_008106180.1| PREDICTED: poly [ADP-ribose] polymerase 4 [Anolis carolinensis] 0.0
habu1_s536_g02483.t1 gi|701407020|ref|XP_009997737.1| PREDICTED: poly [ADP-ribose] polymerase 4 [Chaetura pelagica] 0.0
habu1_s536_g02483.t1 gi|641751364|ref|XP_008167619.1| PREDICTED: poly [ADP-ribose] polymerase 4 [Chrysemys picta bellii] 0.0
habu1_s536_g02483.t1 gi|591368733|ref|XP_007059204.1| PREDICTED: poly [ADP-ribose] polymerase 4-like [Chelonia mydas] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 8.8
Venom grand-1 4.9
Pit, infrared sensing 5.7
Nose 9.2
Brain-1 6.5
Eye 4.4
fetal fibroblast 12.7
venom gland-2 7.8
Brain-2 7.0
Spleen 6.8
Lung 7.4
Liver 9.2
Kidney 7.3
Pancreas 7.4
Small intestine 12.9
Large intestine 10.1
Stomach 15.7
heart 8.8
ovary 22.7
cheek muscle 8.1

Transcript
Transcript IDhabu1_s536_g02483.t1
Definition-
>habu1_s536_g02483.t1
gaacttcccttgaggtaaggaaccaggaagtctctgctgagcaattggaataaagcagccagcaggatgacaattgcaac
ttttgccaggtgcatattctttctgagaatcaaaaagttaacaattctagaaaagaacagactgaagaagtccattaagg
aaaatggtgggcagattgcatttggattaaatcaagagtgcactcatgttgtcgctgatgatgctgatgcactcagcccc
agtcatctgaaaaccatccagaagtatgagctgcctatagtaaatgttgatttcatatgggagtcaatcaaagaaagaag
acttctacaatgtgagaactatgagctatcccaatcagtgccctgtgaaacaggtatggagccaactttaatgaatggtg
atgacagccctaaggaaaaagatgtttctgaggagaatcacaagcataaatgggatgacagcagaaacttagaaaaacta
agatggtattcagagaatggtgaatatgttccatattttcctaaagagtttgagcttgcaaaatatgacatccttgaaaa
gattgcagcacatggtgaatatgttgttcttgaaatgcaatgctttcagcaggagtgcagttacccattttgtataagag
cacattacagcatgctggaaggatgcccaaaacaaaaacgactgatgccagctaagacttctgaagaagctagaagactc
tatgccctttctattcaggatttaaagaagacgggttttgaattaagaaaagactttccatatcaagcagaatatttagt
atcagaaaaattacaagagatgcttgtagcagatgcagtcagtaccattgttttgtctgaaaaagttggtaggtttgtgg
aacttatctggaccgaagcagttggacacctggatggtctgctagataaacacgtaacaatcagcctcaatgatgtgagc
agagctgaaggcattcttcttcaggcaaagaagtcttgggaagaaatagcatctctaacagagctgtccgcagtcatgtc
agaattctataaaatcataccccacaaaaatgtttcggatgatgatgttagcaaagagttgatatatactaaacgggatc
tctgtcagctgattagagacatgctgaatattagtgaaataaacatgtcagttcttaacccatcatccctttctaagtat
cgggctttgagatgcaggattgatgctctagatgtggaaagtgaagagtttaacaatgtcaaacacttgctggaacaaaa
ctccagtgaaaatctaatacaggttttgaatatatataaagtcagcagagcaactgaaggaatggtgtttgagggaaatc
ttggcaatgttcaatctttattccatggatcgtctgtttgcaactttgtgggaatcctctcaagaggactacttttgcca
agggtagctgaagaatatgccttacaaagaacagatttcgggtacttgggcaatggcatttatttcagcaactctgtaag
aacaagcattaaatactcccagccatgtgaaacagatggaactcgactgttgctcatttgtgatgtagcacttggaaaat
gttggaagactgaggaacactgctacttttcaagggaaggaccaccattcggtcatggtagtgtgcatggaatccgtaga
acagaaaagaatgaaactatttttgaggatgatgaatttgtagtgtacagaaccagtcaggtcaagatcaaatatgtggt
tcaatattcatgtgttaatgacaaaattaaagtattccagccaataattcagactgaattagaagaccagagcctttcgt
ttgaagatgatgaccagtctaaggattatacagtaccaagctgtgatgtattgaatgatatttctgctggcctactggac
agagctggaaatcaaattcctcttaaagatattcaaatcaaaggaagaataatagactttatagcagaggttgtggtgtt
tcagacctatgaaaatgaaacagagagtcccattgaggcaaaatatgtcttccctttggatgacacagctgctgtatgtg
gatttgaagcgttcattaaaggaaagcatataataggagaggttaaagaaaaggaaaaagcacatcaagaatatagagag
gccatcagtcgaggcgatggagcttatatgatggatcaggatgcacctgacatttttactgtttctgttggaaacttgcc
gccttcaacaaaagtgctcatcaagatcacctacatcacagagctcagctacgagaatggaaatctttgctttcacttgc
caactgctgtagctccttggcaacaagacaaagcattacatgaaaacacacaagactcagtaaggaaaatttgcattaga
caaacagaagcaaaaagagagttcagtttagaaatgtccattgaaatgcccttcaaaatcaataacattagtagttggac
acatccgcttaaaataaagaaaactgattgtaaagcagtggtttctactactgaaggcagtttcttggacactagtggct
tttcaatggaaatcctgattggggatgtatatttgcccagaatgtgggtcgaaaaacatccagatggaaatagcgaggcc
tgtatgcttgtatttcaaccagagtttgaagttccgtttgatcgtttaagcatccacggtgaagctgttatttgcctaga
ttgctccaattccatggcaggttcagcaatccagcaagccaaggagattgccttacatgctctaaactcatgtcacttga
caagaaaaataagtgtactcaaatttgggacaaattttgtagaagtttgttccaatcttgatgattctccaatggatttc
acagctttgaaagaatttattacatcagccacagctacaatgggagagtcaaacttatggaaagtactgcgttatctgag
tttgctttaccctagtaaaagcaagcgcaatattattcttatatctgatggacatcttcagaacgaaggcatgaccctgc
aggttgtgaagaaaaatgcactgcacaccagaatattcacatgtggagtgggtcttacagcaaattgtcacatgctgaga
tctttatcccactatggagctggagcttttgaatatttcgatgtgaagtcaaaatataactgggagagaaaggtaaaaag
ccagacaactagaatgttttctccacagtgcagttctattctcattgaatggcagacttatagtacagaaaatcctaaac
ttagttgtacccctgctcagatacatgctctatttaaccacgagcgtcttctagtctatggatttatcctcaattgcaca
caggccattttaaaggcacaagtagataatcaaaaattgtatacactggtgtctacaactgaactgcagaagaccacagg
aactatgctccataaacttgcagcaagagcctttattagagagtatgaacgaggaatgcttgatgagaatgaaacagaac
atgagatgaaaagagaacagctgaagtccgacatcattgagctcagcctgaagaactccattgtgacccagtttacaagc
tttgtggcaattgaaaaaagggagggagatgaagatcaaagtggtgatattttatatcacttggagcccatagctaaaca
tgatgtcgatattttaccctgcatagaatattcaataggagaccctctggacaatgacagtacgttggagcatgacttta
tatctgaatgtgagatatctgacttctgcgccatgcctgccatttgctattatgctgcaggtggtactttagaccctgat
tttcaagtgcaggaaatgtctgtagacttgtgcgagtcagacaggggagaaattgcttttggacaacctcgcagaccccc
tgtttgtaaaactgtttcacacaaaaaaaagaaacctgtttctaagcaactgcttacctttcaaccagaaggagaaatat
taaaacctgcaaaaaaagtgaagagatcttattataaaagaaagacaaaagcttctgaaacaaaattaaagacgactcat
tatgcagctaaatcttcagaagagaatttataccagcttcatatgaatttgcaggatagacttcccacatcatttagggt
gttgaccttaagttctgttgactggcctcagctcttcaagcttcaaaatcaggatggattttggcaacttacgtctgagc
ttgggatgcttttagatcttgatgtgcataatttagttaatgtttcacttgcaaaaaatggaattcaatcacttggtcca
aaaggaaatgagaggctgttgcagctgattgctacccttctagtgctccaagctatacatttcaaacaactggaaggtct
tatcttcaaatctctaatgagactgaaagagtctcctccatcatgggcacttagtccagtaaggaaagctattgagtggg
caaacagaactaaccgtgaatttccaggaggccgtatagtgcgtcgcgctggtgctgccactcacagcaggatgttatgt
agtacgttacaccatgatgtgagcggcagcaccggcatggcgtgtcacgtggtgtcttgccgcaagcggcagcactggca
caatgctctgcagcgtcctgccatgagtgatggcaccagtgtgacgtgacatgcgatgtcctctaatttcagccttttga
aagcatgcttcttcctattcatgttagaaacatgattaaaacactaacaaaattggattgct

Protein
Protein IDhabu1_s536_g02483.t1
Definition-
>habu1_s536_g02483.t1
MTIATFARCIFFLRIKKLTILEKNRLKKSIKENGGQIAFGLNQECTHVVADDADALSPSHLKTIQKYELPIVNVDFIWES
IKERRLLQCENYELSQSVPCETGMEPTLMNGDDSPKEKDVSEENHKHKWDDSRNLEKLRWYSENGEYVPYFPKEFELAKY
DILEKIAAHGEYVVLEMQCFQQECSYPFCIRAHYSMLEGCPKQKRLMPAKTSEEARRLYALSIQDLKKTGFELRKDFPYQ
AEYLVSEKLQEMLVADAVSTIVLSEKVGRFVELIWTEAVGHLDGLLDKHVTISLNDVSRAEGILLQAKKSWEEIASLTEL
SAVMSEFYKIIPHKNVSDDDVSKELIYTKRDLCQLIRDMLNISEINMSVLNPSSLSKYRALRCRIDALDVESEEFNNVKH
LLEQNSSENLIQVLNIYKVSRATEGMVFEGNLGNVQSLFHGSSVCNFVGILSRGLLLPRVAEEYALQRTDFGYLGNGIYF
SNSVRTSIKYSQPCETDGTRLLLICDVALGKCWKTEEHCYFSREGPPFGHGSVHGIRRTEKNETIFEDDEFVVYRTSQVK
IKYVVQYSCVNDKIKVFQPIIQTELEDQSLSFEDDDQSKDYTVPSCDVLNDISAGLLDRAGNQIPLKDIQIKGRIIDFIA
EVVVFQTYENETESPIEAKYVFPLDDTAAVCGFEAFIKGKHIIGEVKEKEKAHQEYREAISRGDGAYMMDQDAPDIFTVS
VGNLPPSTKVLIKITYITELSYENGNLCFHLPTAVAPWQQDKALHENTQDSVRKICIRQTEAKREFSLEMSIEMPFKINN
ISSWTHPLKIKKTDCKAVVSTTEGSFLDTSGFSMEILIGDVYLPRMWVEKHPDGNSEACMLVFQPEFEVPFDRLSIHGEA
VICLDCSNSMAGSAIQQAKEIALHALNSCHLTRKISVLKFGTNFVEVCSNLDDSPMDFTALKEFITSATATMGESNLWKV
LRYLSLLYPSKSKRNIILISDGHLQNEGMTLQVVKKNALHTRIFTCGVGLTANCHMLRSLSHYGAGAFEYFDVKSKYNWE
RKVKSQTTRMFSPQCSSILIEWQTYSTENPKLSCTPAQIHALFNHERLLVYGFILNCTQAILKAQVDNQKLYTLVSTTEL
QKTTGTMLHKLAARAFIREYERGMLDENETEHEMKREQLKSDIIELSLKNSIVTQFTSFVAIEKREGDEDQSGDILYHLE
PIAKHDVDILPCIEYSIGDPLDNDSTLEHDFISECEISDFCAMPAICYYAAGGTLDPDFQVQEMSVDLCESDRGEIAFGQ
PRRPPVCKTVSHKKKKPVSKQLLTFQPEGEILKPAKKVKRSYYKRKTKASETKLKTTHYAAKSSEENLYQLHMNLQDRLP
TSFRVLTLSSVDWPQLFKLQNQDGFWQLTSELGMLLDLDVHNLVNVSLAKNGIQSLGPKGNERLLQLIATLLVLQAIHFK
QLEGLIFKSLMRLKESPPSWALSPVRKAIEWANRTNREFPGGRIVRRAGAATHSRMLCSTLHHDVSGSTGMACHVVSCRK
RQHWHNALQRPAMSDGTSVT

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