Gene
| Gene Model ID | habu1_s536_g02487 |
|---|---|
| Locus | habu1_scaffold536 : 1535293 ... 1644201 : - |
| To GenomeBrowser | habu1_scaffold536:1535293..1644201 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lambda-crystallin homolog | EC:1.1.1.35 EC:1.1.1.45 GO:0003857 GO:0006550 GO:0006552 GO:0006554 GO:0006568 GO:0006574 GO:0006633 GO:0018874 GO:0042803 GO:0050104 GO:0055114 GO:0070062 GO:0070403 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02487.t3 | 1 | 1 | 3HCDH_N | 9 | 186 | 0.0 | 177.9 | 0.0 | 0.0 | 177.5 |
| habu1_s536_g02487.t3 | 1 | 1 | NAD_Gly3P_dh_N | 9 | 126 | 6.1e-06 | 26.0 | 6.2e-09 | 1.0e-05 | 25.3 |
| habu1_s536_g02487.t3 | 1 | 1 | 3HCDH | 192 | 258 | 2.7e-14 | 53.3 | 3.6e-17 | 5.9e-14 | 52.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02487.t3 | gi|602641611|ref|XP_007427606.1| | PREDICTED: lambda-crystallin-like, partial [Python bivittatus] | 0.0 |
| habu1_s536_g02487.t3 | gi|558230366|ref|XP_006138913.1| | PREDICTED: lambda-crystallin homolog isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.9 |
| Venom grand-1 | 6.4 |
| Pit, infrared sensing | 12.3 |
| Nose | 8.4 |
| Brain-1 | 6.0 |
| Eye | 5.8 |
| fetal fibroblast | 11.5 |
| venom gland-2 | 6.7 |
| Brain-2 | 5.4 |
| Spleen | 7.4 |
| Lung | 5.7 |
| Liver | 27.2 |
| Kidney | 40.5 |
| Pancreas | 12.7 |
| Small intestine | 9.1 |
| Large intestine | 5.6 |
| Stomach | 6.5 |
| heart | 4.9 |
| ovary | 4.7 |
| cheek muscle | 19.8 |
Transcript
| Transcript ID | habu1_s536_g02487.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02487.t1 gagggtgtcctctttgctaagcctgcttcctctgccgaaggttctgcgtttctccaccaccatgaatcctacccagaagg ggcgaattgtgattgttggcagtggactcattggaagcagctgggccatggtttttgcatctggtggttttcaagtaaag ctctatgatactgtggaagcacaggttacaaaaagcttgaaaaaaattggtgaacaaatgaaagaactcgaaacagctgg aatgctgaaaggctccctcaaagctgaccagcagatcactctcattagtggttgcacagatttaaaagaagcactcaaag atgccatttatgttcaggagtgtatacctgagaatgtagaactgaaaaagaagattttttctcagttagacctaatagtc aataatgatgctatcctagcaagttcaacctcgactctcttgcctacaaaattattcactggattgaagcatgtgaagca gtgtatagttgcgcatcccgtaaatccaccatattatgtgccacttgttgaattagttcctcatccagaaactgatcctt ctacaatggagaaaacctatgctttgatgaagaatataggacagtcaccagttaaattaacaagagagatagatggattt gttctgaaccgacttcagtatgctcttattagtgaaacatggagactcgttggggatggaatagtatcaccagatgatct agaccttgtgatgtctgatggcttgggaatgcggtatgcgtttatgggacctctggaaacaatgcatctaaatgctgaag ctaaaaattgtggtgatcgctcactatcatgtggtttgggagtggctgcctttccagagaaccgccatcttttcaaggaa cgctgaactattttgagagataccgtaaaggtattatccatgtcttgaaaacatttggaccaataccagattttgctggg gaaacagaacagaaaatcaatgaggccatggttaaaaaaactccaagtgatccagagcacctaaatgccaggagacagtg gagagatgaatgcctcatgcgcctggccaaactgaaaaaggatattaaatcggatgacgtgaaccatgttt |
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| Transcript ID | habu1_s536_g02487.t2 |
| Definition | - |
>habu1_s536_g02487.t2 gagggtgtcctctttgctaagcctgcttcctctgccgaaggttctgcgtttctccaccaccatgaatcctacccagaagg ggcgaattgtgattgttggcagtggactcattggaagcagctgggccatggtttttgcatctggtggttttcaagtaaag ctctatgatactgtggaagcacaggttacaaaaagcttgaaaaaaattggtgaacaaatgaaagaactcgaaacagctgg aatgctgaaaggctccctcaaagctgaccagcagatcactctcattagtggttgcacagatttaaaagaagcactcaaag atgccatttatgttcaggagtgtatacctgagaatgtagaactgaaaaagaagattttttctcagttagacctaatagtc aataatgatgctatcctagcaagttcaacctcgactctcttgcctacaaaattattcactggattgaagcatgtgaagca gtgtatagttgcgcatcccgtaaatccaccatattatgtgccacttgttgaattagttcctcatccagaaactgatcctt ctacaatggagaaaacctatgctttgatgaagaatataggacagtcaccagttaaattaacaagagagatagatggattt gttctgaaccgacttcagtatgctcttattagtgaaacatggagactcgttggggatggaatagtatcaccagatgatct agaccttgtgatgtctgatggcttgggaatgcggtatgcgtttatgggacctctggaaacaatgcatctaaatgctgaag gaacgctgaactattttgagagataccgtaaaggtattatccatgtcttgaaaacatttggaccaataccagattttgct ggggaaacagaacagaaaatcaatgaggatttcattgtcaaaaaaagatggcagaattctaaaccattcattctggataa tctctcacgccttcatccagtgccaatattcaagtatctggttcccatgtaatagagataggatagctctgctggaaagg gacaagcatgttattgttaacaacctcacaatgtggagcatagtttgatgacatggtgagcagagaaactttttaaaaat cggatgaatgagaagatcttttcaaaagcaatagtgcatgcatcgccgcctgatggtgtcctgatgtgtcagactacagt tcctggaactgtcagtcattataaccaatgggccactagtctggaattttggttgatgtatccagatgtattcccaatac caggttttgccaaacactgcagtagcacatagggtaagaacattggaaaaagatatcttaaatgttttagaagtctgcaa ggattagaggagacacttgtttattattaacaccagtatactcatgaatataataacaagcgtacagattggaaaagaaa ggcatttttgtagcaataaagtgttgctcttccaatgtgaag |
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| Transcript ID | habu1_s536_g02487.t3 |
| Definition | - |
>habu1_s536_g02487.t3 gagggtgtcctctttgctaagcctgcttcctctgccgaaggttctgcgtttctccaccaccatgaatcctacccagaagg ggcgaattgtgattgttggcagtggactcattggaagcagctgggccatggtttttgcatctggtggttttcaagtaaag ctctatgatactgtggaagcacaggttacaaaaagcttgaaaaaaattggtgaacaaatgaaagaactcgaaacagctgg aatgctgaaaggctccctcaaagctgaccagcagatcactctcattagtggttgcacagatttaaaagaagcactcaaag atgccatttatgttcaggagtgtatacctgagaatgtagaactgaaaaagaagattttttctcagttagacctaatagtc aataatgatgctatcctagcaagttcaacctcgactctcttgcctacaaaattattcactggattgaagcatgtgaagca gtgtatagttgcgcatcccgtaaatccaccatattatgtgccacttgttgaattagttcctcatccagaaactgatcctt ctacaatggagaaaacctatgctttgatgaagaatataggacagtcaccagttaaattaacaagagagatagatggattt gttctgaaccgacttcagtatgctcttattagtgaaacatggagactcgttggggatggaatagtatcaccagatgatct agaccttgtgatgtctgatggcttgggaatgcggtatgcgtttatgggacctctggaaacaatgcatctaaatgctgaag gaacgctgaactattttgagagataccgtaaaggtattatccatgtcttgaaaacatttggaccaataccagattttgct ggggaaacagaacagaaaatcaatgaggccatggttaaaaaaactccaagtgatccagagcacctaaatgccaggagaca gtggagagatgaatgcctcatgcgcctggccaaactgaaaaaggatattaaatcggatgacttgttcaagtttattttca tgaagcaggtcataaatggtcctaaatctgaaagattagagagtacctgcacgcggaactttgagaaaatgctggtcttt tcccgcctcttgctttttgcaacagcgtccgctggaggcgtaattaaaaagctgctgcacctcaaccagtcgggaacggt cgggcgcaccggccggccgtcgcgcaagaggaccaagagagaaccgggcgccaaaagacccgcgactcctgagttcccgc ctacagtttgctttcaaagggaacacctgtttcttgcccactgaaatcaaaagatccgatttatatttagccttacagtc gtgaccaaagaacacactcagttatggactggggagctctacaagccatcttaggaggtgtaaacagacactccaccagc attgggaaaatctggctcactgtcctgtttattttccgtgtcatgattcttgtggttgcagcagaaaaggtctggggaga cgagcagcaagacttttcttgtaataccctacaacctggatgtaaaaatgtctgctatgatgagcatttcccactttctc acattagactttgggctctccaacttatctttgtctctactcctgctctgttggtggcaatgcatgtggcatacagaaaa cataagaaaaaacaggaatatagacatagaaagatggatgtcga |
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Protein
| Protein ID | habu1_s536_g02487.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02487.t1 MNPTQKGRIVIVGSGLIGSSWAMVFASGGFQVKLYDTVEAQVTKSLKKIGEQMKELETAGMLKGSLKADQQITLISGCTD LKEALKDAIYVQECIPENVELKKKIFSQLDLIVNNDAILASSTSTLLPTKLFTGLKHVKQCIVAHPVNPPYYVPLVELVP HPETDPSTMEKTYALMKNIGQSPVKLTREIDGFVLNRLQYALISETWRLVGDGIVSPDDLDLVMSDGLGMRYAFMGPLET MHLNAEAKNCGDRSLSCGLGVAAFPENRHLFKER |
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| Protein ID | habu1_s536_g02487.t2 |
| Definition | - |
>habu1_s536_g02487.t2 MNPTQKGRIVIVGSGLIGSSWAMVFASGGFQVKLYDTVEAQVTKSLKKIGEQMKELETAGMLKGSLKADQQITLISGCTD LKEALKDAIYVQECIPENVELKKKIFSQLDLIVNNDAILASSTSTLLPTKLFTGLKHVKQCIVAHPVNPPYYVPLVELVP HPETDPSTMEKTYALMKNIGQSPVKLTREIDGFVLNRLQYALISETWRLVGDGIVSPDDLDLVMSDGLGMRYAFMGPLET MHLNAEGTLNYFERYRKGIIHVLKTFGPIPDFAGETEQKINEDFIVKKRWQNSKPFILDNLSRLHPVPIFKYLVPM |
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| Protein ID | habu1_s536_g02487.t3 |
| Definition | - |
>habu1_s536_g02487.t3 MNPTQKGRIVIVGSGLIGSSWAMVFASGGFQVKLYDTVEAQVTKSLKKIGEQMKELETAGMLKGSLKADQQITLISGCTD LKEALKDAIYVQECIPENVELKKKIFSQLDLIVNNDAILASSTSTLLPTKLFTGLKHVKQCIVAHPVNPPYYVPLVELVP HPETDPSTMEKTYALMKNIGQSPVKLTREIDGFVLNRLQYALISETWRLVGDGIVSPDDLDLVMSDGLGMRYAFMGPLET MHLNAEGTLNYFERYRKGIIHVLKTFGPIPDFAGETEQKINEAMVKKTPSDPEHLNARRQWRDECLMRLAKLKKDIKSDD LFKFIFMKQVINGPKSERLESTCTRNFEKMLVFSRLLLFATASAGGVIKKLLHLNQSGTVGRTGRPSRKRTKREPGAKRP ATPEFPPTVCFQREHLFLAH |
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