Gene
| Gene Model ID | habu1_s536_g02489 |
|---|---|
| Locus | habu1_scaffold536 : 1687582 ... 1692046 : + |
| To GenomeBrowser | habu1_scaffold536:1687582..1692046 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: interleukin-17D [Python bivittatus] | GO:0005125 GO:0005576 GO:0006954 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02489.t2 | 1 | 1 | IL17 | 65 | 147 | 9.2e-33 | 112.1 | 8.6e-37 | 1.3e-32 | 111.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.9 |
| Nose | 2.6 |
| Brain-1 | 3.6 |
| Eye | 2.1 |
| fetal fibroblast | 1.7 |
| venom gland-2 | 0.4 |
| Brain-2 | 3.0 |
| Spleen | 0.3 |
| Lung | 2.0 |
| Liver | 0.3 |
| Kidney | 0.7 |
| Pancreas | 1.1 |
| Small intestine | 0.1 |
| Large intestine | 0.9 |
| Stomach | 0.4 |
| heart | 0.6 |
| ovary | 0.2 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s536_g02489.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02489.t1 ttcagtcagcccagcgagggaagcgcacgagtcccggccctttccctccggcgtattgaaccgtcctggcaccagcagcc gggggtcctgctgcgagaagccgggcgctcttccaacttttcctccgctccctccaaccgccgccagggccaggaggacc ccaggcgctcgccaagccagcccttcccgccgctccgcgcgctgaggcgtccctgtcatgcagacggccaagggatggat actggtttgtctacttttgtgtgggctcggtttccccagagtagaagctgtcaaaataagcaaacgtcccatgcgctctc gatcctgtgcagaccgacctgaggagcttttggaacagctgtatggaagactcacagctggcatgctcagtgccttccat cacaccctgcagttggagcccctggaaaatgatcagaacatcagttgtcctgtgggaggcaggctagctactgataagac atatcggctccccatcaatctcaacagtgtctctccttggtcctacagaatctcctacgattctacccggtatccgaaat acattcctgaagcctactgcctttgtaagggctgtcttacaggtgattacggagaagaaaatctccattttcgaagtacg ccagtattcatgccgactgtcatcttgcatcgaaccacatcctgcacgggcggccgctacgcttacactgaggactatgt ctctattcctgtgggctgcacctgtgtaccagaacatgaaaaaagaagctcaagtgaattccagcatggataaaagagca gtaaaattgatgggaaatcagaataatgacaagccagcatccaaatgaggaatggaaaggaggccagaaacaaaggatgt ttcggttcatgatttctgtttcgaagaactgcgatgtccacttcctgcaacagagttcatctcagttaatttcatagaac ttggggtcaattgtaattaaaattgtcctttctttaaaaacagtggagtttgcaagatgcctttttcctcataaatggag acgtgacagatcctggggagttgcaatattgaaatgctgggggacacttacattgaagcattttaagattgcaagtgagg gccactgaaatgaaagtgagaacaatataaatgaataattaaaacatttttcaaagaatgctgaaaaattagctgtgcat ctgcaactgattttttttaaaaatgtaagtagctttgacttggtatttagaatcttatattctggaattacaacattaaa actgttaaaagctagagaatagatctgtcagtgcctattaatcctggttgtttattgcctctagcagaaatgtactaaat gggttgtggagttgccaactatacaaatattaagtacttatcaatcaatgttcatagaataaataaccattgtttaaaaa cattc |
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| Transcript ID | habu1_s536_g02489.t2 |
| Definition | - |
>habu1_s536_g02489.t2 agtgggttggcttagcccagtcaccggagagtcgcgcttctttcgcgagctcgagtgggaaagaaaagcacgagcatcgg ggcgaggcgctctcggggctttttttgcttcgcgcaaaacggcgagcggttggaatgaacaaagtaaaaacgcgcctttg gaaagacgagctgacggcgggatggatactggtttgtctacttttgtgtgggctcggtttccccagagtagaagctgtca aaataagcaaacgtcccatgcgctctcgatcctgtgcagaccgacctgaggagcttttggaacagctgtatggaagactc acagctggcatgctcagtgccttccatcacaccctgcagttggagcccctggaaaatgatcagaacatcagttgtcctgt gggaggcaggctagctactgataagacatatcggctccccatcaatctcaacagtgtctctccttggtcctacagaatct cctacgattctacccggtatccgaaatacattcctgaagcctactgcctttgtaagggctgtcttacaggtgattacgga gaagaaaatctccattttcgaagtacgccagtattcatgccgactgtcatcttgcatcgaaccacatcctgcacgggcgg ccgctacgcttacactgaggactatgtctctattcctgtgggctgcacctgtgtaccagaacatgaaaaaagaagctcaa gtgaattccagcatggataaaagagcagtaaaattgatgggaaatcagaataatgacaagccagcatccaaatgaggaat ggaaaggaggccagaaacaaaggatgtttcggttcatgatttctgtttcgaagaactgcgatgtccacttcctgcaacag agttcatctcagttaatttcatagaacttggggtcaattgtaattaaaattgtcctttctttaaaaacagtggagtttgc aagatgcctttttcctcataaatggagacgtgacagatcctggggagttgcaatattgaaatgctgggggacacttacat tgaagcattttaagattgcaagtgagggccactgaaatgaaagtgagaacaatataaatgaataattaaaacatttttca aagaatgctgaaaaattagctgtgcatctgcaactgattttttttaaaaatgtaagtagctttgacttggtatttagaat cttatattctggaattacaacattaaaactgttaaaagctagagaatagatctgtcagtgcctattaatcctggttgttt attgcctctagcagaaatgtactaaatgggttgtggagttgccaactatacaaatattaagtacttatcaatcaatgttc atagaataaataaccattgtttaaaaacattc |
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Protein
| Protein ID | habu1_s536_g02489.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02489.t1 MQTAKGWILVCLLLCGLGFPRVEAVKISKRPMRSRSCADRPEELLEQLYGRLTAGMLSAFHHTLQLEPLENDQNISCPVG GRLATDKTYRLPINLNSVSPWSYRISYDSTRYPKYIPEAYCLCKGCLTGDYGEENLHFRSTPVFMPTVILHRTTSCTGGR YAYTEDYVSIPVGCTCVPEHEKRSSSEFQHG |
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| Protein ID | habu1_s536_g02489.t2 |
| Definition | - |
>habu1_s536_g02489.t2 MRSRSCADRPEELLEQLYGRLTAGMLSAFHHTLQLEPLENDQNISCPVGGRLATDKTYRLPINLNSVSPWSYRISYDSTR YPKYIPEAYCLCKGCLTGDYGEENLHFRSTPVFMPTVILHRTTSCTGGRYAYTEDYVSIPVGCTCVPEHEKRSSSEFQHG |
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