Gene
| Gene Model ID | habu1_s536_g02492 |
|---|---|
| Locus | habu1_scaffold536 : 1874974 ... 1879540 : + |
| To GenomeBrowser | habu1_scaffold536:1874974..1879540 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone deacetylase complex subunit sap18 | GO:0000381 GO:0005737 GO:0016607 GO:0035145 GO:0043065 GO:0044822 GO:0048025 GO:0061574 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02492.t1 | 1 | 1 | SAP18 | 17 | 137 | 0.0 | 166.0 | 0.0 | 0.0 | 165.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02492.t1 | gi|602648489|ref|XP_007430661.1| | PREDICTED: histone deacetylase complex subunit SAP18 [Python bivittatus] | 0.0 |
| habu1_s536_g02492.t1 | gi|634852780|ref|XP_007940699.1| | PREDICTED: histone deacetylase complex subunit SAP18 [Orycteropus afer afer] | 0.0 |
| habu1_s536_g02492.t1 | gi|585689270|ref|XP_006894164.1| | PREDICTED: histone deacetylase complex subunit SAP18 [Elephantulus edwardii] | 0.0 |
| habu1_s536_g02492.t1 | gi|488552331|ref|XP_004467593.1| | PREDICTED: histone deacetylase complex subunit SAP18 [Dasypus novemcinctus] | 0.0 |
| habu1_s536_g02492.t1 | gi|471413824|ref|XP_004388453.1| | PREDICTED: histone deacetylase complex subunit SAP18 [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 46.6 |
| Venom grand-1 | 34.1 |
| Pit, infrared sensing | 50.2 |
| Nose | 47.5 |
| Brain-1 | 28.3 |
| Eye | 38.2 |
| fetal fibroblast | 126.3 |
| venom gland-2 | 61.0 |
| Brain-2 | 33.1 |
| Spleen | 34.1 |
| Lung | 33.5 |
| Liver | 40.5 |
| Kidney | 44.8 |
| Pancreas | 32.7 |
| Small intestine | 40.3 |
| Large intestine | 37.4 |
| Stomach | 36.9 |
| heart | 35.2 |
| ovary | 116.9 |
| cheek muscle | 24.0 |
Transcript
| Transcript ID | habu1_s536_g02492.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02492.t1 gggggattcggacgaagagccgtcccgatggcggtggagtctcgcgttactcaggaggagattaagaaagagcccgaaaa gccgatagaccgcgagaagacttgtcccctcttgttgagagtcttcaccacgaacaatgggcgtcatcacagaatggatg aatttgcacgaggaaatgtaccttccagtgaacttcagatctacacatggatggacgcaactttaaaagagctgaccagt ttagtgaaggaagtctatccagaagcaagaaagaaggggacacatttcaactttgcaatagtttatacagatcttaaaag gcctgggtacagggtgaaagaaattggcagtacaatgtcaggaagaaagggcacagatgattccatgactttgcagtctc agaagttccagataggggattacctagacatagcaattactccaccaaatcgagcgccacctccttctggtcgtatgaga ccttactaatattttgccttacatcactgtcatccgtagaccttcatcgatttgtatctgcattattgtactgattaatt ttgaaatgtaaagtgagaatactagaacacttagtgatcttaaggattgataattgaattatgttattgtacaaggtatg ccctcaagctattagtttcctttgtcaggttttttttttttataaagttgaccaaaacaacacagctgttctctgtattt tttaaaaaacttgttagggaataaatatgccattgataacttttttg |
|
Protein
| Protein ID | habu1_s536_g02492.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02492.t1 MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFARGNVPSSELQIYTWMDATLKELTSLVKEVYPEA RKKGTHFNFAIVYTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY |
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