Gene
| Gene Model ID | habu1_s536_g02494 |
|---|---|
| Locus | habu1_scaffold536 : 1891214 ... 1894977 : + |
| To GenomeBrowser | habu1_scaffold536:1891214..1894977 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein mitochondrial | GO:0005761 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02494.t2 | 1 | 1 | MRP-63 | 13 | 101 | 1.6e-32 | 111.8 | 2.4e-36 | 1.8e-32 | 111.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 23.8 |
| Venom grand-1 | 42.7 |
| Pit, infrared sensing | 41.7 |
| Nose | 40.5 |
| Brain-1 | 12.3 |
| Eye | 34.7 |
| fetal fibroblast | 50.7 |
| venom gland-2 | 60.7 |
| Brain-2 | 11.4 |
| Spleen | 24.4 |
| Lung | 23.4 |
| Liver | 29.3 |
| Kidney | 28.5 |
| Pancreas | 53.8 |
| Small intestine | 58.0 |
| Large intestine | 36.9 |
| Stomach | 57.1 |
| heart | 93.3 |
| ovary | 94.7 |
| cheek muscle | 142.8 |
Transcript
| Transcript ID | habu1_s536_g02494.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02494.t1 gctcgtggtggaaaggacgcctcgaggcccgggatgtttcttactcgagtactgtttcgaaacagaattcctggaaaaca atggattggtaaacacagacggccaagattcgttagtcctttaatgaaggcaaatatgattaggagacttgaaattgaag ctgaaaatgaatattggctaagttgttcgtatatgacaaaagagcaggagtatcgccatgatgaagaaaatgtatttgca ttaaagcagcaaaaaatagctgaacagaaagcaaagtttcctgaacacaagtatgcttcagaatatctgaagcaccttaa cgtctccaagagatgggcagattcctgatatgtgtcctttgccattctaatggattttatggattcgttggccttgcttt tggggacaatgaaacagtgccacaaagtcaataaatatattcttattttcaatcagc |
|
| Transcript ID | habu1_s536_g02494.t2 |
| Definition | - |
>habu1_s536_g02494.t2 gctcgtggtggaaaggacgcctcgaggcccgaatctagcaaaaactgatatttcaaaagacctttggagggatgtttctt actcgagtactgtttcgaaacagaattcctggaaaacaatggattggtaaacacagacggccaagattcgttagtccttt aatgaaggcaaatatgattaggagacttgaaattgaagctgaaaatgaatattggctaagttgttcgtatatgacaaaag agcaggagtatcgccatgatgaagaaaatgtatttgcattaaagcagcaaaaaatagctgaacagaaagcaaagtttcct gaacacaagtatgcttcagaatatctgaagcaccttaacgtctccaagagatgggcagattcctgatatgtgtcctttgc cattctaatggattttatggattcgttggccttgcttttggggacaatgaaacagtgccacaaagtcaataaatatattc ttattttcaatcagc |
|
Protein
| Protein ID | habu1_s536_g02494.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02494.t1 MFLTRVLFRNRIPGKQWIGKHRRPRFVSPLMKANMIRRLEIEAENEYWLSCSYMTKEQEYRHDEENVFALKQQKIAEQKA KFPEHKYASEYLKHLNVSKRWADS |
|
| Protein ID | habu1_s536_g02494.t2 |
| Definition | - |
>habu1_s536_g02494.t2 MFLTRVLFRNRIPGKQWIGKHRRPRFVSPLMKANMIRRLEIEAENEYWLSCSYMTKEQEYRHDEENVFALKQQKIAEQKA KFPEHKYASEYLKHLNVSKRWADS |
|