Gene
| Gene Model ID | habu1_s536_g02496 |
|---|---|
| Locus | habu1_scaffold536 : 1956784 ... 2016353 : - |
| To GenomeBrowser | habu1_scaffold536:1956784..2016353 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium uptake protein mitochondrial | GO:0005509 GO:0005758 GO:0006851 GO:0046982 GO:0051561 GO:0051562 GO:1990246 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02496.t1 | 1 | 1 | EF-hand_7 | 313 | 389 | 2.2e-10 | 40.4 | 1.4e-09 | 2.6e-06 | 27.4 |
| habu1_s536_g02496.t1 | 1 | 1 | EF-hand_8 | 347 | 394 | 2.2e-13 | 49.5 | 8.2e-13 | 1.5e-09 | 37.2 |
| habu1_s536_g02496.t1 | 1 | 1 | EF-hand_1 | 368 | 394 | 5.9e-09 | 34.6 | 8.5e-08 | 0.00016 | 20.7 |
| habu1_s536_g02496.t1 | 1 | 1 | EF-hand_6 | 369 | 393 | 2.7e-08 | 32.9 | 9.2e-07 | 0.0017 | 18.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02496.t1 | gi|602648501|ref|XP_007430667.1| | PREDICTED: calcium uptake protein 2, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s536_g02496.t1 | gi|637286145|ref|XP_003219318.2| | PREDICTED: calcium uptake protein 2, mitochondrial isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02496.t1 | gi|530635121|ref|XP_005304432.1| | PREDICTED: calcium uptake protein 2, mitochondrial isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s536_g02496.t1 | gi|637286149|ref|XP_008106201.1| | PREDICTED: calcium uptake protein 2, mitochondrial isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02496.t1 | gi|558230546|ref|XP_006138989.1| | PREDICTED: calcium uptake protein 2, mitochondrial [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.0 |
| Venom grand-1 | 4.6 |
| Pit, infrared sensing | 7.2 |
| Nose | 6.1 |
| Brain-1 | 2.8 |
| Eye | 4.5 |
| fetal fibroblast | 14.4 |
| venom gland-2 | 4.6 |
| Brain-2 | 3.1 |
| Spleen | 4.6 |
| Lung | 10.1 |
| Liver | 10.3 |
| Kidney | 5.3 |
| Pancreas | 5.8 |
| Small intestine | 8.3 |
| Large intestine | 7.2 |
| Stomach | 9.1 |
| heart | 9.9 |
| ovary | 7.4 |
| cheek muscle | 30.3 |
Transcript
| Transcript ID | habu1_s536_g02496.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02496.t1 gcgccgcaagagaacgtgtgttttgttttggtttgtttttagaaagagctagaaaatgcagagaacatggcggcggcgtg gggagctaccttggtcgctcttgtccgcaattgcgggaggcgcggggcgctcgtgcttggcagcttccgggggcgcagac gctggacgaacccctggctcgcaaccgcctccctgctcggcgggggcgccttggtggggtcctgcagaggatggagcggg caggaggggaccggcggcttcttcctggtcctggcgcagaaggaagatgttgtggatgaagagatggcagagaagctttc cattcgaaagcaacgttttatgcaatttgcttctttggaatatgaaggagaatattacatgactccaagagacttcctgt tctcagttatgtttgacaaatcagagcgtaaaactttggccaagaaactgacaaaaaaggaagtagattctaccctagca aatattgcgaaggctagaccaggaccaaccttttttagagatcttggagacacaggattgatttcctacacagagtatct gtttttgctgacaatactcacaaaaccacagactggatttcgtattgcttttaaaatgttggatgcagatggcaatgaac aagtagagaaaaaagaattctttaagcttcagaaaataattggaaagcaagatgagtttaaaacagcttcaggagatgac atcctgtctcaggaatcagaaatggaaggtgctgatatcaacaccatgttactggtccacttttttggaaaaggaggaaa agataaacttcagtattcggaattccaaagatttatgcaggatttacaagcagaagtacaagaaatggaattcaatcagt tttccaaaggtctaaccttcatgagaaaggaagattttgtagagtggttgctgtatttcactgacgaagaaaataatgac atttattggcaaaatgtgaaaacgagaatccaagcaggagagagcatcagtatggatgaatttaagactttctgccaatt tacaaatcgtttagaagatttttcaattgccctgaaaatgtttactgtagccagccgtcctgttaaacgggcggagttca agagagctgtgaaagtggctacaggacaggagctctcagataatgttttggacaccatcttcaagatctttgatttagat ggagataattgcctcagccatgcagagttccttggagttctcaaaaacaggatgcatcgtggattaagggtgcctcagca acaaggagtccaaggttactggaaatgtgtgaaacgagaaaccattaaaggagcaaaagaagtttggaagcaaaccggga agagtcctttttaaatgtatttgtaagatcatttgtgactcagctttctgattttgctttgtttgtcatgtatttgttta cagattggctatactgggtgcaatcatttaatacaatgaaatatctgacacttctat |
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Protein
| Protein ID | habu1_s536_g02496.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02496.t1 MAAAWGATLVALVRNCGRRGALVLGSFRGRRRWTNPWLATASLLGGGALVGSCRGWSGQEGTGGFFLVLAQKEDVVDEEM AEKLSIRKQRFMQFASLEYEGEYYMTPRDFLFSVMFDKSERKTLAKKLTKKEVDSTLANIAKARPGPTFFRDLGDTGLIS YTEYLFLLTILTKPQTGFRIAFKMLDADGNEQVEKKEFFKLQKIIGKQDEFKTASGDDILSQESEMEGADINTMLLVHFF GKGGKDKLQYSEFQRFMQDLQAEVQEMEFNQFSKGLTFMRKEDFVEWLLYFTDEENNDIYWQNVKTRIQAGESISMDEFK TFCQFTNRLEDFSIALKMFTVASRPVKRAEFKRAVKVATGQELSDNVLDTIFKIFDLDGDNCLSHAEFLGVLKNRMHRGL RVPQQQGVQGYWKCVKRETIKGAKEVWKQTGKSPF |
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