Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s536_g02497
Locus habu1_scaffold536 : 2004224 ... 2120136 : +
To GenomeBrowser habu1_scaffold536:2004224..2120136
Genes list of scaffold habu1_scaffold536

Annotation by Blast2GO
Annotation GO
fibroblast growth factor 9 GO:0000122 GO:0001525 GO:0001649 GO:0002053 GO:0002062 GO:0005104 GO:0005615 GO:0006606 GO:0007267 GO:0008083 GO:0008543 GO:0008584 GO:0010628 GO:0021762 GO:0030178 GO:0030238 GO:0030326 GO:0030949 GO:0032927 GO:0042472 GO:0045880 GO:0048505 GO:0048566 GO:0048706 GO:0050679 GO:0060045 GO:0060484 GO:0070062 GO:0090263

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s536_g02497.t4 1 1 FGF 96 207 2.7e-36 124.0 3.09999e-40 4.6e-36 123.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.0
Pit, infrared sensing 0.2
Nose 0.2
Brain-1 0.4
Eye 0.4
fetal fibroblast 0.0
venom gland-2 0.2
Brain-2 0.7
Spleen 0.0
Lung 0.2
Liver 0.1
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.2
Stomach 0.2
heart 0.0
ovary 4.7
cheek muscle 0.0

Transcript
Transcript IDhabu1_s536_g02497.t1
Definition-
>habu1_s536_g02497.t1
cgttcctccaggccttcctgtcctctaccatcttctggagtccatttaagctcacgcctactgcttcagtaagtggttcc
tgctggatgtgggggatagtgaaatattgtgagattggctaggaatctgtcacagaacattgaaaatgaaaatcatatca
ccacagcagcagcctatcagtgcagcagcagccagtagtactgaagcagccacaactttaccaaatttcattcccctggg
agtccgagtcccagattttgcacagattctgactggatttcatttagagattttccccaatggtacgatccaaggaacca
ggcaagaccacagcagatttggtatcctggaatttatcagtatagcagtaggcctggtcagcattcgaggggtagacagt
ggactttatttgggaatgaatgaaaaaggagaactatatggctcggataaattaacccaggagtgtgtgttcagagaaca
atttgaagagaactggtataatacatactcatcaaacctatataagcatgtggacactggaagacgatattatatcattc
ttgtggcgacgactgaagtgagacactattggtcaagttccccagttcagcttctgaatctgaagactcaagatgatccc
tggttgcagaggccctgaccataggcatccacaggaagaaggcaagagagtggagaaatgagaaaaactcctgcatactg
agtgtcacctggaattcatggattgcatgattctgatctttggagatgtagatatatcatcctaatccaggttacagaag
ttgtttgtcaaggaaaaaaaatctgtggaaaatcggaaagcataaaatgggaagcagaaaatgaaattagcatgcctttg
ttccttatgctggtctcctgtcagaagaaagactgagcttttgaatatacaataatatcataaacaacatacttcacaat
ttatcattttcttaggatggaatgacattttaactctgccaatgcgtatttctgaaactgtttgctgactaagtactagg
gagaggaggatagtgattgcagtttggtaggaccaagctggtaaaatgctcccttgtaaatgcctcccctccccttttct
ccaagttggacttttctccagtccagatatgtgaaaatatagcttcatttttttctgggaaaagagaacatgccaaggaa
taattttaataaagaatttagtaaatttgtatgcc
Transcript IDhabu1_s536_g02497.t2
Definition-
>habu1_s536_g02497.t2
ccacgacgcttgcatgaatgaggccctgagtgcctgcaacattcgtgcaagtgatgtgccgagtgcccgcaatttgttaa
gttagtaacacgattgttaaatgaatctgtttccccattgactatgtttatcagaaggtcacaaaagaggatcacatgat
cccgggacactacagcgatcatgaatatgagtcagttgccaagcgtctgaattttgatcacgtgaccatagggatgctgc
aaaataagttgttacgtgtgaaaaacaattgtgaagttgggaactatctcggggtccaagacgcgggcccctttgggaac
gtgcccgtgttgccggcggacagcccggttttgttaagcgaccacctgggccagtccgaagcaggtggactcccccgggg
gcctgcggtaacggacttggatcacttaaaaggcatcctgaggcggaggcaactctattgcaggactggatttcatttag
agattttccccaatggtacgatccaaggaaccaggcaagaccacagcagatttggtatcctggaatttatcagtatagca
gtaggcctggtcagcattcgaggggtagacagtggactttatttgggaatgaatgaaaaaggagaactatatggctcgga
taaattaacccaggagtgtgtgttcagagaacaatttgaagagaactggtataatacatactcatcaaacctatataagc
atgtggacactggaagacgatattatatcattcttgtggcgacgactgaagtgagacactattggtcaagttccccagtt
cagcttctgaatctgaagactcaagatgatccctggttgcagaggccctgaccataggcatccacaggaagaaggcaaga
gagtggagaaatgagaaaaactcctgcatactgagtgtcacctggaattcatggattgcatgattctgatctttggagat
gtagatatatcatcctaatccaggttacagaagttgtttgtcaaggaaaaaaaatctgtggaaaatcggaaagcataaaa
tgggaagcagaaaatgaaattagcatgcctttgttccttatgctggtctcctgtcagaagaaagactgagcttttgaata
tacaataatatcataaacaacatacttcacaatttatcattttcttaggatggaatgacattttaactctgccaatgcgt
atttctgaaactgtttgctgactaagtactagggagaggaggatagtgattgcagtttggtaggaccaagctggtaaaat
gctcccttgtaaatgcctcccctccccttttctccaagttggacttttctccagtccagatatgtgaaaatatagcttca
tttttttctgggaaaagagaacatgccaaggaataattttaataaagaatttagtaaatttgtatgcc
Transcript IDhabu1_s536_g02497.t3
Definition-
>habu1_s536_g02497.t3
ccacgacgcttgcatgaatgaggccctgagtgcctgcaacattcgtgcaagtgatgtgccgagtgcccgcaatttgttaa
gttagtaacacgattgttaaatgaatctgtttccccattgactatgtttatcagaaggtcacaaaagaggatcacatgat
cccgggacactacagcgatcatgaatatgagtcagttgccaagcgtctgaattttgatcacgtgaccatagggatgctgc
aaaataagttgttacgtgtgaaaaacaattgtgaagttgggaactatctcggggtccaagacgcgggcccctttgggaac
gtgcccgtgttgccggcggacagcccggttttgttaagcgaccacctgggccagtccgaagcaggtggactcccccgggg
gcctgcggtaacggacttggatcacttaaaaggcatcctgaggcggaggcaactctattgcaggactggatttcatttag
agattttccccaatggtacgatccaaggaaccaggcaagaccacagcagatttggtatcctggaatttatcagtatagca
gtaggcctggtcagcattcgaggggtagacagtggactttatttgggaatgaatgaaaaaggagaactatatggctcgga
taaattaacccaggagtgtgtgttcagagaacaatttgaagagaactggtataatacatactcatcaaacctatataagc
atgtggacactggaagacgatattatggcaagaaatcagaggccctgaccataggcatccacaggaagaaggcaagagag
tggagaaatgagaaaaactcctgcatactgagtgtcacctggaattcatggattgcatgattctgatctttggagatgta
gatatatcatcctaatccaggttacagaagttgtttgtcaaggaaaaaaaatctgtggaaaatcggaaagcataaaatgg
gaagcagaaaatgaaattagcatgcctttgttccttatgctggtctcctgtcagaagaaagactgagcttttgaatatac
aataatatcataaacaacatacttcacaatttatcattttcttaggatggaatgacattttaactctgccaatgcgtatt
tctgaaactgtttgctgactaagtactagggagaggaggatagtgattgcagtttggtaggaccaagctggtaaaatgct
cccttgtaaatgcctcccctccccttttctccaagttggacttttctccagtccagatatgtgaaaatatagcttcattt
ttttctgggaaaagagaacatgccaaggaataattttaataaagaatttagtaaatttgtatgcc
Transcript IDhabu1_s536_g02497.t4
Definition-
>habu1_s536_g02497.t4
ccacgacgcttgcatgaatgaggccctgagtgcctgcaacattcgtgcaagtgatgtgccgagtgcccgcaatttgttaa
gttagtaacacgattgttaaatgaatctgtttccccattgactatgtttatcagaaggtcacaaaagaggatcacatgat
cccgggacactacagcgatcatgaatatgagtcagttgccaagcgtctgaattttgatcacgtgaccatagggatgctgc
aaaataagttgttacgtgtgaaaaacaattgtgaagttgggaactatctcggggtccaagacgcgggcccctttgggaac
gtgcccgtgttgccggcggacagcccggttttgttaagcgaccacctgggccagtccgaagcaggtggactcccccgggg
gcctgcggtaacggacttggatcacttaaaaggcatcctgaggcggaggcaactctattgcaggactggatttcatttag
agattttccccaatggtacgatccaaggaaccaggcaagaccacagcagatttggtatcctggaatttatcagtatagca
gtaggcctggtcagcattcgaggggtagacagtggactttatttgggaatgaatgaaaaaggagaactatatggctcgga
taaattaacccaggagtgtgtgttcagagaacaatttgaagagaactggtataatacatactcatcaaacctatataagc
atgtggacactggaagacgatattatatcattcttgtggcgacgactgaagtgagacactattggtcaagttccccagtt
cagcttctgaatctgaagactcaagatgatccctggttgcagaggccctgaccataggcatccacaggaagaaggcaaga
gagtggagaaatgagaaaaactcctgcatactgagtgtcacctggaattcatggattgcatgattctgatctttggagat
gtagatatatcatcctaatccaggttacagaagttgtttgtcaaggaaaaaaaatctgtggaaaatcggaaagcataaaa
tgggaagcagaaaatgaaatgtaagaaaaaaatagaacaagcaaacctttattgctagaaaagtagcatgcctttgttcc
ttatgctggtctcctgtcagaagaaagactgagcttttgaatatacaataatatcataaacaacatacttcacaatttat
cattttcttaggatggaatgacattttaactctgccaatgcgtatttctgaaactgtttgctgactaagtactagggaga
ggaggatagtgattgcagtttggtaggaccaagctggtaaaatgctcccttgtaaatgcctcccctccccttttctccaa
gttggacttttctccagtccagatatgtgaaaatatagcttcatttttttctgggaaaagagaacatgccaaggaataat
tttaataaagaatttagtaaatttgtatgcc

Protein
Protein IDhabu1_s536_g02497.t1
Definition-
>habu1_s536_g02497.t1
MKIISPQQQPISAAAASSTEAATTLPNFIPLGVRVPDFAQILTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSI
RGVDSGLYLGMNEKGELYGSDKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYIILVATTEVRHYWSSSPVQLLNLK
TQDDPWLQRP
Protein IDhabu1_s536_g02497.t2
Definition-
>habu1_s536_g02497.t2
MIPGHYSDHEYESVAKRLNFDHVTIGMLQNKLLRVKNNCEVGNYLGVQDAGPFGNVPVLPADSPVLLSDHLGQSEAGGLP
RGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYG
SDKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYIILVATTEVRHYWSSSPVQLLNLKTQDDPWLQRP
Protein IDhabu1_s536_g02497.t3
Definition-
>habu1_s536_g02497.t3
MIPGHYSDHEYESVAKRLNFDHVTIGMLQNKLLRVKNNCEVGNYLGVQDAGPFGNVPVLPADSPVLLSDHLGQSEAGGLP
RGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYG
SDKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYGKKSEALTIGIHRKKAREWRNEKNSCILSVTWNSWIA
Protein IDhabu1_s536_g02497.t4
Definition-
>habu1_s536_g02497.t4
MIPGHYSDHEYESVAKRLNFDHVTIGMLQNKLLRVKNNCEVGNYLGVQDAGPFGNVPVLPADSPVLLSDHLGQSEAGGLP
RGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYG
SDKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYIILVATTEVRHYWSSSPVQLLNLKTQDDPWLQRP

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