Gene
| Gene Model ID | habu1_s536_g02503 |
|---|---|
| Locus | habu1_scaffold536 : 2568248 ... 2620490 : - |
| To GenomeBrowser | habu1_scaffold536:2568248..2620490 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial intermediate peptidase | EC:3.4.24.0 GO:0004222 GO:0005739 GO:0006508 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02503.t2 | 2 | 1 | Peptidase_M3 | 250 | 443 | 0.0 | 439.3 | 0.0 | 1.4013e-45 | 156.8 |
| habu1_s536_g02503.t2 | 2 | 2 | Peptidase_M3 | 501 | 751 | 0.0 | 439.3 | 0.0 | 0.0 | 280.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02503.t2 | gi|564235129|ref|XP_006274491.1| | PREDICTED: mitochondrial intermediate peptidase [Alligator mississippiensis] | 0.0 |
| habu1_s536_g02503.t2 | gi|589947432|ref|XP_006986389.1| | PREDICTED: mitochondrial intermediate peptidase [Peromyscus maniculatus bairdii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 9.2 |
| Pit, infrared sensing | 6.7 |
| Nose | 7.2 |
| Brain-1 | 7.8 |
| Eye | 6.2 |
| fetal fibroblast | 14.1 |
| venom gland-2 | 8.7 |
| Brain-2 | 7.6 |
| Spleen | 4.7 |
| Lung | 4.4 |
| Liver | 14.3 |
| Kidney | 9.3 |
| Pancreas | 8.9 |
| Small intestine | 7.2 |
| Large intestine | 6.6 |
| Stomach | 8.0 |
| heart | 19.4 |
| ovary | 27.9 |
| cheek muscle | 24.3 |
Transcript
| Transcript ID | habu1_s536_g02503.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02503.t1 gctgttttggaggcggtgcgtctctccgaggcgagcggtcccctggctaccatgtgggctggatggcaccgagtggcgcg caggacctcgggctgcttgaagcaagcgaggctgggccggctcggcggcggcacgaagaaatgggtcagcaccagctggt ccccggtgggcgccgccttcaatgcccaacagcagcggctggcggtggggcagaaaacgggtctgtttggtgtacctgaa cttaattgtccagaaggatttcaagaagctcaaaaaaactcattgcaagaagcagaccgattggtccaaaaagcatgcat tacacctcctgggaaagagattgtgttggtttttgatcagctctctgatgctttatgtagagtagcagatctggctgact ttgtgaaaatcgcccatcctaatcttgcttttagagacgctgctgaggaagcctgcagaagcattggtaccatggtagaa aaattaaacacaaatgtagatttatgtcagagtctgagaagattgttaattgataaagatgttatggattctcttgaccc tcaaacaaggcgagtggcagaacttttcatgtttgattttgagatcagtggtattcatttgaatgaagaacagcgcagaa atgcagtaaatcttaatgtcaaaattttggatttatgtaatgaatttctcctggggtctcatcttccaaacaagattgaa aagcatgtgttaccagaacacattcgccataactttgcagttgaaggcagttttgcccaaatcaattgtctcagtgcaga caatccagatgatttggtacgtgaagtcgcctacaaagtttttctatacccaaatgttcagcaactacaatgtttagatg aattgcttggcagtagaaatgctctggcccagttagttggctatgatacatttgctcatcgagctcttcaaggaacaatg acccaaaccccagagacagtaatgcagtttcttacaaagctttcagataaattattcggtcgcactcaaaaggattttga aatgatggaaggtatgaaaatgaaactatatcctttcaaatcaaaattaatgccttgggatcacccataccttagtggtg tcttacgtgctgagaggtataatattgaaccagctctatattgtccctttttctctcttggggcatgtatggatggactg aacattttgttcaataagcttctaggaatctctctctatgctgaacagcctgagaatggagaagtgtggtgtgaagatgt tcgtaaactggcagttgtccacgaacaagaaggattattgggatatatttactgtgacttttttcaaaggccagacaagc ctcatcaggattgtcactttacaatccgtggaggcagactgcaagaaaatggagaatatcaacttcctgttgttgtcatc atgctaagtttacctcaatccaataatggttcactaacgttgctcactcctggaatgatggagaatctcttccatgaaat gggacatgctatgcattccatgctgggaagaacacgttatcaacatgtcacaggtacaaggtgttctactgactttgctg aagttccttctatcttaatggaatactttgcaaatgattaccgagtggtgaaccaatttgcaagacactataaaacgggt cagccactacctaaaaacatggtgtcaagactctgtgaatctaaaaaagtatgtgctgctgctgatatgcaacttcagat tttttatgctgtcttggatcaaatataccatgggaaacatcccttaaaaaagtcaaccacagaaattttaaaggaaaccc aagagaaattttatggattgccatatgttcctgacactgcctggcaactccgattcagccatcttgtgggttatggtgct aagtactattcctatctcatgtctagggctgtatcatctatggtatggaagcagtgctttgcacaggatccattcaacag agcaatgggtgaacgttatcggaaagaaatgctggcacatggtggtggcaaagaaccaatgctcatggttcaaggtatgc tacagaagcaaccatcagtggaagattttgtggatgcccttgtttcagacttagatcaagactttgaaacattctttatg gattctgaataacagagaagaatattttgaaagtttttggatgtattaacagtgtacatagaagttctgtctgattggca tttgtaaaaatgtgtgtataaaataaatggtttacttgaaaagtaaaat |
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| Transcript ID | habu1_s536_g02503.t2 |
| Definition | - |
>habu1_s536_g02503.t2 gctgttttggaggcggtgcgtctctccgaggcgagcggtcccctggctaccatgtgggctggatggcaccgagtggcgcg caggacctcgggctgcttgaagcaagcgaggctgggccggctcggcggcggcacgaagaaatgggtcagcaccagctggt ccccggtgggcgccgccttcaatgcccaacagcagcggctggcggtggggcagaaaacgggtctgtttggtgtacctgaa cttaattgtccagaaggatttcaagaagctcaaaaaaactcattgcaagaagcagaccgattggtccaaaaagcatgcat tacacctcctgggaaagagattgtgttggtttttgatcagctctctgatgctttatgtagagtagcagatctggctgact ttgtgaaaatcgcccatcctaatcttgcttttagagacgctgctgaggaagcctgcagaagcattggtaccatggtagaa aaattaaacacaaatgtagatttatgtcagagtctgagaagattgttaattgataaagatgttatggattctcttgaccc tcaaacaaggcgagtggcagaacttttcatgtttgattttgagatcagtggtattcatttgaatgaagaacagcgcagaa atgcagtaaatcttaatgtcaaaattttggatttatgtaatgaatttctcctggggtctcatcttccaaacaagattgaa aagcatgtgttaccagaacacattcgccataactttgcagttgaaggcagttttgcccaaatcaattgtctcagtgcaga caatccagatgatttggtacgtgaagtcgcctacaaagtttttctatacccaaatgttcagcaactacaatgtttagatg aattgcttggcagtagaaatgctctggcccagttagttggctatgatacatttgctcatcgagctcttcaaggaacaatg acccaaaccccagagacagtaatgcagtttcttacaaagctttcagataaattattcggtcgcactcaaaaggattttga aatgatggaaggtatgaaaatgaaactatatcctttcaaatcaaaattaatgccttgggatcacccataccttagtggtg tcttacgtgctgagaggtataatattgaaccagctctatattgtccctttttctctcttggggcatgtatggatggactg aacattttgttcaataagcttctaggaatctctctctatgctgaacagcctgagaatggagaagtgtggtgtgaagatgt tcgtaaactggcagttgtccacgaacaagaaggattattgggatatatttactgtgacttttttcaaaggccagacaagc ctcatcagtgcatagagaatattttggccactggctatattctcttaaggaagtggcccccaaccaagaatcgattccac gaagagaggttttccgtagactggaggggccgtggtttcatgtgctgcctgcatcctgcggatagggctttgcttgtttg cgcagcctggtttctgacgtgccgtggactggattgtcactttacaatccgtggaggcagactgcaagaaaatggagaat atcaacttcctgttgttgtcatcatgctaagtttacctcaatccaataatggttcactaacgttgctcactcctggaatg atggagaatctcttccatgaaatgggacatgctatgcattccatgctgggaagaacacgttatcaacatgtcacaggtac aaggtgttctactgactttgctgaagttccttctatcttaatggaatactttgcaaatgattaccgagtggtgaaccaat ttgcaagacactataaaacgggtcagccactacctaaaaacatggtgtcaagactctgtgaatctaaaaaagtatgtgct gctgctgatatgcaacttcagattttttatgctgtcttggatcaaatataccatgggaaacatcccttaaaaaagtcaac cacagaaattttaaaggaaacccaagagaaattttatggattgccatatgttcctgacactgcctggcaactccgattca gccatcttgtgggttatggtgctaagtactattcctatctcatgtctagggctgtatcatctatggtatggaagcagtgc tttgcacaggatccattcaacagagcaatgggtgaacgttatcggaaagaaatgctggcacatggtggtggcaaagaacc aatgctcatggttcaaggtatgctacagaagcaaccatcagtggaagattttgtggatgcccttgtttcagacttagatc aagactttgaaacattctttatggattctgaataacagagaagaatattttgaaagtttttggatgtattaacagtgtac atagaagttctgtctgattggcatttgtaaaaatgtgtgtataaaataaatggtttacttgaaaagtaaaat |
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Protein
| Protein ID | habu1_s536_g02503.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02503.t1 MWAGWHRVARRTSGCLKQARLGRLGGGTKKWVSTSWSPVGAAFNAQQQRLAVGQKTGLFGVPELNCPEGFQEAQKNSLQE ADRLVQKACITPPGKEIVLVFDQLSDALCRVADLADFVKIAHPNLAFRDAAEEACRSIGTMVEKLNTNVDLCQSLRRLLI DKDVMDSLDPQTRRVAELFMFDFEISGIHLNEEQRRNAVNLNVKILDLCNEFLLGSHLPNKIEKHVLPEHIRHNFAVEGS FAQINCLSADNPDDLVREVAYKVFLYPNVQQLQCLDELLGSRNALAQLVGYDTFAHRALQGTMTQTPETVMQFLTKLSDK LFGRTQKDFEMMEGMKMKLYPFKSKLMPWDHPYLSGVLRAERYNIEPALYCPFFSLGACMDGLNILFNKLLGISLYAEQP ENGEVWCEDVRKLAVVHEQEGLLGYIYCDFFQRPDKPHQDCHFTIRGGRLQENGEYQLPVVVIMLSLPQSNNGSLTLLTP GMMENLFHEMGHAMHSMLGRTRYQHVTGTRCSTDFAEVPSILMEYFANDYRVVNQFARHYKTGQPLPKNMVSRLCESKKV CAAADMQLQIFYAVLDQIYHGKHPLKKSTTEILKETQEKFYGLPYVPDTAWQLRFSHLVGYGAKYYSYLMSRAVSSMVWK QCFAQDPFNRAMGERYRKEMLAHGGGKEPMLMVQGMLQKQPSVEDFVDALVSDLDQDFETFFMDSE |
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| Protein ID | habu1_s536_g02503.t2 |
| Definition | - |
>habu1_s536_g02503.t2 MWAGWHRVARRTSGCLKQARLGRLGGGTKKWVSTSWSPVGAAFNAQQQRLAVGQKTGLFGVPELNCPEGFQEAQKNSLQE ADRLVQKACITPPGKEIVLVFDQLSDALCRVADLADFVKIAHPNLAFRDAAEEACRSIGTMVEKLNTNVDLCQSLRRLLI DKDVMDSLDPQTRRVAELFMFDFEISGIHLNEEQRRNAVNLNVKILDLCNEFLLGSHLPNKIEKHVLPEHIRHNFAVEGS FAQINCLSADNPDDLVREVAYKVFLYPNVQQLQCLDELLGSRNALAQLVGYDTFAHRALQGTMTQTPETVMQFLTKLSDK LFGRTQKDFEMMEGMKMKLYPFKSKLMPWDHPYLSGVLRAERYNIEPALYCPFFSLGACMDGLNILFNKLLGISLYAEQP ENGEVWCEDVRKLAVVHEQEGLLGYIYCDFFQRPDKPHQCIENILATGYILLRKWPPTKNRFHEERFSVDWRGRGFMCCL HPADRALLVCAAWFLTCRGLDCHFTIRGGRLQENGEYQLPVVVIMLSLPQSNNGSLTLLTPGMMENLFHEMGHAMHSMLG RTRYQHVTGTRCSTDFAEVPSILMEYFANDYRVVNQFARHYKTGQPLPKNMVSRLCESKKVCAAADMQLQIFYAVLDQIY HGKHPLKKSTTEILKETQEKFYGLPYVPDTAWQLRFSHLVGYGAKYYSYLMSRAVSSMVWKQCFAQDPFNRAMGERYRKE MLAHGGGKEPMLMVQGMLQKQPSVEDFVDALVSDLDQDFETFFMDSE |
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