Gene
| Gene Model ID | habu1_s536_g02504 |
|---|---|
| Locus | habu1_scaffold536 : 2622651 ... 2627660 : - |
| To GenomeBrowser | habu1_scaffold536:2622651..2627660 |
| Genes list of scaffold | habu1_scaffold536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02504.t1 | 3 | 1 | Collagen | 13 | 68 | 7.3e-27 | 92.7 | 7.1e-13 | 3.5e-09 | 36.0 |
| habu1_s536_g02504.t1 | 3 | 2 | Collagen | 73 | 127 | 7.3e-27 | 92.7 | 1.2e-06 | 0.0058 | 16.1 |
| habu1_s536_g02504.t1 | 3 | 3 | Collagen | 124 | 179 | 7.3e-27 | 92.7 | 2.6e-11 | 1.3e-07 | 31.0 |
| habu1_s536_g02504.t1 | 1 | 1 | C1q | 187 | 311 | 4.5e-38 | 130.1 | 1.10002e-41 | 5.6e-38 | 129.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02504.t1 | gi|602631377|ref|XP_007422592.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A [Python bivittatus] | 0.0 |
| habu1_s536_g02504.t1 | gi|637286205|ref|XP_008106215.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9-like [Anolis carolinensis] | 0.0 |
| habu1_s536_g02504.t1 | gi|695163652|ref|XP_009510176.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A-like [Phalacrocorax carbo] | 0.0 |
| habu1_s536_g02504.t1 | gi|675402767|ref|XP_008919697.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A-like [Manacus vitellinus] | 0.0 |
| habu1_s536_g02504.t1 | gi|723569683|ref|XP_010304978.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A-like, partial [Balearica regulorum gibbericeps] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.9 |
| Kidney | 230.9 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s536_g02504.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02504.t1 atcagattcctgctggttctgaatcttcctggttgcagtgcctgtttatgaggtggctccagagaagggatgcaatatac atcctttttcaaagaggcaaggatatgtttcccttgaaacatacatacaaggaaacagaagctcagatcagtacaactgc ataagccaatataactttgaagcccccattatgtagaaggtgatagaactctgtgcagttaatatcagtgttgggcagtt tgctggtgattaatatttaaataccaaaatcattccacatccacatcttggcatctatctctacattaatcattgaacat ttctgaagactgaataacactctttataacttagtaaccaactaaatgattatccttatttttccttcatgtacaaccat tggaggaaagtacaatatgtctgaaaacatccatctgggcagcaataagtaaaggatgaaactctggattctttttctgg ctgttgcagtcagcacagaagaaatgccaaggccaaacatctgtgttgaaagatttcctggaattcctgggagccctgga cacaatggcttaccaggacgagatggacgagacggaacaaagggcgaaaaaggagacacaggtgacccaggaaatccagg aaagtcaggccgagatggcatcaatggaaataagggagaacaaggggctgacggcagagttgaagaaaaagggaacaaag gtgataaaggagagcgaggctggcctgggaaatttgggccaaaaggaattcctggaccggtaggggacaaaggtcatcag ggggagctaggaccacaaggaaggaaagggataaaaggggaccttgggccaattggccccaaaggaaataaaggtgaaat tggaattcaaggtgaaataggattaaggggacctatcggtccaaaaggctacgtgggtcctaaaggagagataggaggcc ctggaccaaaaggcagtaaaggcaatcagggagaaaggggttggaaaggagaacggggagaaaaaggaaatcttggcagt accccagttattggcaaaagtgctttcagtgtaggcctcaccgctaaatttcctccactcaatgttcccatcaaatttga taaagtcttatacaacagcttcgaccattatagcacagaaactggagtgttcacctgccaaatccctggggtctattatt ttacctaccacatcactgttttttcaaggaatatgagagtagctctagttaaaaacgagcacaggatgctccacactgca gatatgtaccaaggggtcgaagaccaggcctctggaggaatcgtcctggaacttcagaaaggggatcggatatggctgca gtgttatggaggagagacttataacggattgtatgcagatccagatgatgacactgtcttcagtggctttcttctattca gtacctcagaagcaccagcatctgtgccctccagcatataagctgattgcttggttttgaatatgtcacttatatgacac agcttagttttcacatgaagtttccatcaaaattcttgaagccaaatcaagaactcccaggcattttttttgcagaatga tgctgaataccacgtgcattactttgtttatatggttcctaaattctaatatcttacataattctttaaatcacaagata gaaaaattatcttgtcctttttgttgttattgttttaatcaagtaaacttgctttaacttcgtacaaaaatatttttaga ctaattaaaatcacaaaatccactattatatatttatgcctaaatatgtttaaataaagcaaaaaaaaaattcaacaaat |
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Protein
| Protein ID | habu1_s536_g02504.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02504.t1 MPRPNICVERFPGIPGSPGHNGLPGRDGRDGTKGEKGDTGDPGNPGKSGRDGINGNKGEQGADGRVEEKGNKGDKGERGW PGKFGPKGIPGPVGDKGHQGELGPQGRKGIKGDLGPIGPKGNKGEIGIQGEIGLRGPIGPKGYVGPKGEIGGPGPKGSKG NQGERGWKGERGEKGNLGSTPVIGKSAFSVGLTAKFPPLNVPIKFDKVLYNSFDHYSTETGVFTCQIPGVYYFTYHITVF SRNMRVALVKNEHRMLHTADMYQGVEDQASGGIVLELQKGDRIWLQCYGGETYNGLYADPDDDTVFSGFLLFSTSEAPAS VPSSI |
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