Gene
| Gene Model ID | habu1_s536_g02508 |
|---|---|
| Locus | habu1_scaffold536 : 2873601 ... 2906110 : + |
| To GenomeBrowser | habu1_scaffold536:2873601..2906110 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoporin p58 p45 | GO:0005643 GO:0006913 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02508.t1 | gi|675402773|ref|XP_008920029.1| | PREDICTED: LOW QUALITY PROTEIN: nucleoporin p58/p45, partial [Manacus vitellinus] | 0.0 |
| habu1_s536_g02508.t1 | gi|297274132|ref|XP_002800748.1| | PREDICTED: nucleoporin p58/p45-like [Macaca mulatta] | 0.0 |
| habu1_s536_g02508.t1 | gi|488522483|ref|XP_004453145.1| | PREDICTED: nucleoporin p58/p45 isoform X2 [Dasypus novemcinctus] | 0.0 |
| habu1_s536_g02508.t1 | gi|545189920|ref|XP_005601159.1| | PREDICTED: nucleoporin p58/p45 isoform X2 [Equus caballus] | 0.0 |
| habu1_s536_g02508.t1 | gi|545189918|ref|XP_005601158.1| | PREDICTED: nucleoporin p58/p45 isoform X1 [Equus caballus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 2.8 |
| Nose | 2.6 |
| Brain-1 | 2.2 |
| Eye | 1.8 |
| fetal fibroblast | 6.1 |
| venom gland-2 | 3.9 |
| Brain-2 | 2.4 |
| Spleen | 1.9 |
| Lung | 3.4 |
| Liver | 2.1 |
| Kidney | 1.7 |
| Pancreas | 2.0 |
| Small intestine | 1.6 |
| Large intestine | 1.5 |
| Stomach | 2.3 |
| heart | 2.6 |
| ovary | 17.3 |
| cheek muscle | 5.5 |
Transcript
| Transcript ID | habu1_s536_g02508.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02508.t1 cggaagacccagttttttttgtttgtttaatgaaatcattaaatccgtagtcgcccatctcactatcaaagcgaatttgg gctgcttacagtgtaataaaatagaaacgtaaaaacaattatcaatataagaacattttaaaattatacgggttaaatat cgacgcttcataaaagagataaagcacatgcaggcggtgggcacacttacctgcatccttgtattctttgtgcgtgcatt ggtacagcaacgaaaaattatggattcatgaaaaagaaaagggatgataattgacatatcacattaacttaatcacattc ttaaagggttttacattattgcatttgatggagttaaaatttaataaattcaggaaactggcagggcaaactactgtaca taaacaaagaacaattcccacattcactagcactaatgatgttacctagcagatgatgggaaagattcaagttaacaaca ataatgtcaaggaagaaagacctttcaaacctgggccttctctggcgagggggtcccaaggccaataatgaagtcaggag tggaccatctgtggccctgaatcagattcaaacatccctgcaagagacaagttcagacttttgctcatctggaggcctta actttggaacgttgggttcaacagctactgctactacaactactccttctgtgggttttggcactggactttttagctca aagcctaccacaggttttaccttaggagggactaatacaggaacagctacaactattgcggcaggattaacattaggcac acctgtttcgactactacttctactacgggccttagtttgggtttcagtaaacctgctggatcagccaccccatttgctc tagctttcactcccacttcttctggacttccattatcttctgcccttacttctgctccagcagcaggctcttctggtttt acattaaatttgggaggcaccacggctccaaccacaactgaacttaaaaatgctgagatagcactaaggacacaaaaaac acctcctggtcttcagcatgaaaatacagcaccagcagactacttcagaattttgattgagcagtttgaagtacaactgc agcagtacagacagcagattgaagaactggaaaatcatcttgctacccaagccaacaattcacacataacgccacaagat ttatccatggctatgcagaaaatttatcaaacgtttgtagctctagctgcacagcttcaatcaatacatgaaaatgtcaa gatgctcaaagaccagtatcttggatacagaaaaacctttttaggagatgctgtggatgtgtttgaggcaaggcgagtag aagcaaagaaatggcagactgccccacgagttacaactggacctactcctttcagcaacataccaaacgcagcggccatt gccatggctgcaacacttacacagcagcaacagcctgctacaggatttgcaggtagtgctggttttggaagcagtgctcc aggtgcaccgtcatttggatttggagcagcaaataagccttcgggaagccttagtgcagatgacattatctatatgacat gataataaaaaataatgatttttctcctttg |
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Protein
| Protein ID | habu1_s536_g02508.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02508.t1 MSRKKDLSNLGLLWRGGPKANNEVRSGPSVALNQIQTSLQETSSDFCSSGGLNFGTLGSTATATTTTPSVGFGTGLFSSK PTTGFTLGGTNTGTATTIAAGLTLGTPVSTTTSTTGLSLGFSKPAGSATPFALAFTPTSSGLPLSSALTSAPAAGSSGFT LNLGGTTAPTTTELKNAEIALRTQKTPPGLQHENTAPADYFRILIEQFEVQLQQYRQQIEELENHLATQANNSHITPQDL SMAMQKIYQTFVALAAQLQSIHENVKMLKDQYLGYRKTFLGDAVDVFEARRVEAKKWQTAPRVTTGPTPFSNIPNAAAIA MAATLTQQQQPATGFAGSAGFGSSAPGAPSFGFGAANKPSGSLSADDIIYMT |
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