Gene
| Gene Model ID | habu1_s536_g02511 |
|---|---|
| Locus | habu1_scaffold536 : 3380238 ... 3398745 : + |
| To GenomeBrowser | habu1_scaffold536:3380238..3398745 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| wiskott-aldrich syndrome protein family member 3 isoform x1 | GO:0003779 GO:0005856 GO:0008360 GO:0014003 GO:0030027 GO:0030032 GO:0030036 GO:0031643 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02511.t2 | 1 | 1 | WH2 | 435 | 460 | 7.4e-07 | 28.5 | 9.6e-11 | 1.4e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02511.t2 | gi|637338932|ref|XP_008116086.1| | PREDICTED: wiskott-Aldrich syndrome protein family member 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s536_g02511.t2 | gi|698449717|ref|XP_009818633.1| | PREDICTED: wiskott-Aldrich syndrome protein family member 3 isoform X2 [Gavia stellata] | 0.0 |
| habu1_s536_g02511.t2 | gi|694835172|ref|XP_009475078.1| | PREDICTED: wiskott-Aldrich syndrome protein family member 3 isoform X2 [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.2 |
| Brain-1 | 2.7 |
| Eye | 3.6 |
| fetal fibroblast | 1.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 2.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.3 |
| heart | 0.0 |
| ovary | 6.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s536_g02511.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02511.t1 accgatcgtaatttgaggactttccctgcccgggagcgccacgcatgcgtggttccgccccctgcgccggccgaggcgta gctggcaagcggcagagacggagcaggccgaccaccagctggcccagcccaagggagacattgaaacatgccattaatca aaaggaacattgaacctcggcacctctgccaaggagctttacctgaaggaattactagtgaattggaatgtgtaaccaat agtactctcgctgccatcatacgtcagctaagcagcttaagcaaacatgctgaagacatatttggtgagttgtttaacga agccaacaacttttacatcagggcaaattctcttcaagacagaattgaccgtctgtctgtcaaggttactcaactggatt cagctgtggaagaagtttcattgcaagatattaatatgaagaaagcattcaaaagttctacagtacaggatcaacaggtt gtttcaaagaacagcattcccaatcctgttgctgatatttataatcagagtgacaaaccacctccactgaatattctcac atcatacagagatgataaaaaagatggcttaaaattttatactgatccttcttatttctttgacctctggaaagaaaaaa tgttacaagatacagagcataagagaaaagagaagagacgacagaaggatcaaaaacgtatagatggcacaactcgtgag gtgaaaaaggttagaaaagcaaggaacaggcgccaagagtggaatatgatggcctatgacaaagaacttagaccagataa ccggttatctcagaatgtttaccctggagcatcttctgaagggtctctgtcccctgaaactagatcccatgcttcagacg taaccagttattcgtatcctgctactccaaatcattcactccgtcatcagttttgccatgtgccttcatgtggaacagga gatggatctcagtttatgcttgcaaaacagggccttgaacatgaatataggttatcttccataacagtgcaacatgctac tttgaataggcctcaagaaccacccccacccccaccgcaaatcttagatggtgctctgggcactgttgcattgataccag cagactatgggatgattgcagctcagatggtggattattataatccttcaggaggatcaccctctgcatcagcgcttatg attccttctgcacagactgcttttgttagtcctctccaaatccctctgttacctacccattctggactaatggctggtac tctgtattctgctactcttcatcttccttctagcgggcatattgttacagctccttctcctcctggcccacctcctcttc ctccaggcccccctgctgcagaatcttctctttcatcctctccattgcatactcctggagtagctgaggttaaaaggcag gagtctatccagtcacccatcagtggtgctcgaagtgatcttcttgctgctattcggatgggaatccagctgaaaaaagt acaagaacaacgtgaacaggaggccaagcgtaagccagttggaaatgatgtggccacaattctttctcgacggattgcag tggaatacagcgattcggatgatgagtcagaatgtgatgaaaatgactgggcttggtactctgttgtacaccagttgtgc cctttcctggattatgaagccctgcactcagccttggactactgcaatgtgctctacatggggctaccattgaagaatat ttggaagcttcagctggcacaaaatgcagcagcacagttttaggggctcctacagtatttgatcaataaaatgtaaatta acatgactgatctaagtttacaattgagacattttgtctttgtatatctgtcttgggttatataaaaatattaataaagt ttacatttaaacttttcttt |
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| Transcript ID | habu1_s536_g02511.t2 |
| Definition | - |
>habu1_s536_g02511.t2 accgatcgtaatttgaggactttccctgcccgggagcgccacgcatgcgtggttccgccccctgcgccggccgaggcgta gctggcaagcggcagagacggagcaggccgaccaccagctggcccagcccaagggagacattgaaacatgccattaatca aaaggaacattgaacctcggcacctctgccaaggagctttacctgaaggaattactagtgaattggaatgtgtaaccaat agtactctcgctgccatcatacgtcagctaagcagcttaagcaaacatgctgaagacatatttggtgagttgtttaacga agccaacaacttttacatcagggcaaattctcttcaagacagaattgaccgtctgtctgtcaaggttactcaactggatt cagctgtggaagaagtttcattgcaagatattaatatgaagaaagcattcaaaagttctacagtacaggatcaacaggtt gtttcaaagaacagcattcccaatcctgttgctgatatttataatcagagtgacaaaccacctccactgaatattctcac atcatacagagatgataaaaaagatggcttaaaattttatactgatccttcttatttctttgacctctggaaagaaaaaa tgttacaagatacagagcataagagaaaagagaagagacgacagaagagaattcacaagctgaattcaagccggcatcag caagttaatgtgagaaaagtaaggtacagaagagaagagtgggagagaaagaaaatgggcattgagttcataagtgacat aaagaaacaagagcaggcaggaggcacaaaagagtcccagatgcccacaggatcccatgcttcagacgtaaccagttatt cgtatcctgctactccaaatcattcactccgtcatcagttttgccatgtgccttcatgtggaacaggagatggatctcag tttatgcttgcaaaacagggccttgaacatgaatataggttatcttccataacagtgcaacatgctactttgaataggcc tcaagaaccacccccacccccaccgcaaatcttagatggtgctctgggcactgttgcattgataccagcagactatggga tgattgcagctcagatggtggattattataatccttcaggaggatcaccctctgcatcagcgcttatgattccttctgca cagactgcttttgttagtcctctccaaatccctctgttacctacccattctggactaatggctggtactctgtattctgc tactcttcatcttccttctagcgggcatattgttacagctccttctcctcctggcccacctcctcttcctccaggccccc ctgctgcagaatcttctctttcatcctctccattgcatactcctggagtagctgaggttaaaaggcaggagtctatccag tcacccatcagtggtgctcgaagtgatcttcttgctgctattcggatgggaatccagctgaaaaaagtacaagaacaacg tgaacaggaggccaagcgtaagccagttggaaatgatgtggccacaattctttctcgacggattgcagtggaatacagcg attcggatgatgagtcagaatgtgatgaaaatgactgggcttggtactctgttgtacaccagttgtgccctttcctggat tatgaagccctgcactcagccttggactactgcaatgtgctctacatggggctaccattgaagaatatttggaagcttca gctggcacaaaatgcagcagcacagttttaggggctcctacagtatttgatcaataaaatgtaaattaacatgactgatc taagtttacaattgagacattttgtctttgtatatctgtcttgggttatataaaaatattaataaagtttacatttaaac ttttcttt |
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Protein
| Protein ID | habu1_s536_g02511.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02511.t1 MPLIKRNIEPRHLCQGALPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLSVKV TQLDSAVEEVSLQDINMKKAFKSSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTSYRDDKKDGLKFYTDPSYFFDL WKEKMLQDTEHKRKEKRRQKDQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQNVYPGASSEGSLSPETRS HASDVTSYSYPATPNHSLRHQFCHVPSCGTGDGSQFMLAKQGLEHEYRLSSITVQHATLNRPQEPPPPPPQILDGALGTV ALIPADYGMIAAQMVDYYNPSGGSPSASALMIPSAQTAFVSPLQIPLLPTHSGLMAGTLYSATLHLPSSGHIVTAPSPPG PPPLPPGPPAAESSLSSSPLHTPGVAEVKRQESIQSPISGARSDLLAAIRMGIQLKKVQEQREQEAKRKPVGNDVATILS RRIAVEYSDSDDESECDENDWAWYSVVHQLCPFLDYEALHSALDYCNVLYMGLPLKNIWKLQLAQNAAAQF |
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| Protein ID | habu1_s536_g02511.t2 |
| Definition | - |
>habu1_s536_g02511.t2 MPLIKRNIEPRHLCQGALPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLSVKV TQLDSAVEEVSLQDINMKKAFKSSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTSYRDDKKDGLKFYTDPSYFFDL WKEKMLQDTEHKRKEKRRQKRIHKLNSSRHQQVNVRKVRYRREEWERKKMGIEFISDIKKQEQAGGTKESQMPTGSHASD VTSYSYPATPNHSLRHQFCHVPSCGTGDGSQFMLAKQGLEHEYRLSSITVQHATLNRPQEPPPPPPQILDGALGTVALIP ADYGMIAAQMVDYYNPSGGSPSASALMIPSAQTAFVSPLQIPLLPTHSGLMAGTLYSATLHLPSSGHIVTAPSPPGPPPL PPGPPAAESSLSSSPLHTPGVAEVKRQESIQSPISGARSDLLAAIRMGIQLKKVQEQREQEAKRKPVGNDVATILSRRIA VEYSDSDDESECDENDWAWYSVVHQLCPFLDYEALHSALDYCNVLYMGLPLKNIWKLQLAQNAAAQF |
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