Gene
| Gene Model ID | habu1_s536_g02512 |
|---|---|
| Locus | habu1_scaffold536 : 3418946 ... 3421137 : - |
| To GenomeBrowser | habu1_scaffold536:3418946..3421137 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g-protein coupled receptor 12 | GO:0004930 GO:0006874 GO:0007186 GO:0016021 GO:0031210 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02512.t1 | 1 | 1 | 7tm_1 | 62 | 302 | 1.1e-38 | 132.8 | 3.69943e-42 | 1.4e-38 | 132.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02512.t1 | gi|602654087|ref|XP_007432891.1| | PREDICTED: G-protein coupled receptor 12 [Python bivittatus] | 0.0 |
| habu1_s536_g02512.t1 | gi|395520808|ref|XP_003764515.1| | PREDICTED: G-protein coupled receptor 12 [Sarcophilus harrisii] | 0.0 |
| habu1_s536_g02512.t1 | gi|126327401|ref|XP_001366959.1| | PREDICTED: G-protein coupled receptor 12 isoform X1 [Monodelphis domestica] | 0.0 |
| habu1_s536_g02512.t1 | gi|558230497|ref|XP_006138968.1| | PREDICTED: G-protein coupled receptor 12 [Pelodiscus sinensis] | 0.0 |
| habu1_s536_g02512.t1 | gi|514773244|ref|XP_005026063.1| | PREDICTED: G-protein coupled receptor 12 [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 3.5 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 3.9 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.8 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s536_g02512.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02512.t1 aggcgccgcgtgcacgggcaggggcttttccacctgcgctcctctcgcgccaacctggagctggcaccgcgacggctgcc cttgtcctgggcttgcgctgggcgaacaatgggcttgcaagaggcgacagccgccgccgcagcaacggcagcagcaaagc ttgctgcataaaaaggaagcggggacgcctcctcctcctcctcctcctcctcctgtagaggggaagccaagaggacgggt ttaaatatgaacgaagacccgacggttaatttatcatggctgcctcaggatcacttagaaaccagcccaccaccagagaa catctcagctgcagtcacctctctcattccttccagtgaccccgaaccaggatttatagtaaacccttgggatgttgtct tatgtacttcaggaacactgatctcctgtgaaaatgctgttgtggtccttatcatcttccataatcccagtcttcgtgcc ccaatgttcctcctgataggcagcttggccttggcagatcttttagcaggaattggattgatcatcaattttctttttgc ttatcttctccagtcggactctaccaagctggtcacagttggtttgatcgtcgcctctttttctgcttctatctgcagtc tgttggccatcactgtggaccggtacctctccctttattatgctttgacttacaattctgagaggacggtgacttttacc tacattatgcttattctgctctggggtgcttcaatctgtgtgggagtcctgccagtcatgggatggaattgcctcaaaga tgagtccacctgcagcgttatcaggcccctcactaaaaataatgcggccatcctctcggtctctttcttgcttatgttcg ctctcatgttacagctgtacattcagatctgcaaaattgtgatgcgccatgctcaccagattgccttgcagcatcacttc ctagcaacttcccactatgtgaccacccggaaaggagtatcaactttagccattatcctgggaacctttgctgcttgctg gatgcctttcacactctattccttaatagctgactacacatatccctctatctacacctacgccaccttgcttccagcca catataattccatcatcaaccctgttatatatgctttccggaatcaagaaatacaaaaggcactttggctcatctgctgc ggctgcataccttcaaacatttctgcaagggccagatcacccagtgatgtttgattaacggtgcagaggaccattgttta tttagcattgtgatgtgtgagccctgctgctctcaataacattgtacataatagattcacagtcagtctgtggggagaat ttacattttttttaaaaaaaaaagcctgttgaccaaaataaaccatgttgtataagcccaggaa |
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Protein
| Protein ID | habu1_s536_g02512.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02512.t1 MNEDPTVNLSWLPQDHLETSPPPENISAAVTSLIPSSDPEPGFIVNPWDVVLCTSGTLISCENAVVVLIIFHNPSLRAPM FLLIGSLALADLLAGIGLIINFLFAYLLQSDSTKLVTVGLIVASFSASICSLLAITVDRYLSLYYALTYNSERTVTFTYI MLILLWGASICVGVLPVMGWNCLKDESTCSVIRPLTKNNAAILSVSFLLMFALMLQLYIQICKIVMRHAHQIALQHHFLA TSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPVIYAFRNQEIQKALWLICCGC IPSNISARARSPSDV |
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