Gene
Gene Model ID | habu1_s536_g02512 |
---|---|
Locus | habu1_scaffold536 : 3418946 ... 3421137 : - |
To GenomeBrowser | habu1_scaffold536:3418946..3421137 |
Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
Annotation | GO |
---|---|
g-protein coupled receptor 12 | GO:0004930 GO:0006874 GO:0007186 GO:0016021 GO:0031210 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s536_g02512.t1 | 1 | 1 | 7tm_1 | 62 | 302 | 1.1e-38 | 132.8 | 3.69943e-42 | 1.4e-38 | 132.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s536_g02512.t1 | gi|602654087|ref|XP_007432891.1| | PREDICTED: G-protein coupled receptor 12 [Python bivittatus] | 0.0 |
habu1_s536_g02512.t1 | gi|395520808|ref|XP_003764515.1| | PREDICTED: G-protein coupled receptor 12 [Sarcophilus harrisii] | 0.0 |
habu1_s536_g02512.t1 | gi|126327401|ref|XP_001366959.1| | PREDICTED: G-protein coupled receptor 12 isoform X1 [Monodelphis domestica] | 0.0 |
habu1_s536_g02512.t1 | gi|558230497|ref|XP_006138968.1| | PREDICTED: G-protein coupled receptor 12 [Pelodiscus sinensis] | 0.0 |
habu1_s536_g02512.t1 | gi|514773244|ref|XP_005026063.1| | PREDICTED: G-protein coupled receptor 12 [Anas platyrhynchos] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 0.0 |
Venom grand-1 | 0.0 |
Pit, infrared sensing | 0.0 |
Nose | 0.1 |
Brain-1 | 3.5 |
Eye | 0.3 |
fetal fibroblast | 0.0 |
venom gland-2 | 0.0 |
Brain-2 | 3.9 |
Spleen | 0.1 |
Lung | 0.0 |
Liver | 0.0 |
Kidney | 0.0 |
Pancreas | 0.0 |
Small intestine | 0.1 |
Large intestine | 0.0 |
Stomach | 0.8 |
heart | 0.0 |
ovary | 0.3 |
cheek muscle | 0.0 |
Transcript
Transcript ID | habu1_s536_g02512.t1 |
---|---|
Definition | - |
>habu1_s536_g02512.t1 aggcgccgcgtgcacgggcaggggcttttccacctgcgctcctctcgcgccaacctggagctggcaccgcgacggctgcc cttgtcctgggcttgcgctgggcgaacaatgggcttgcaagaggcgacagccgccgccgcagcaacggcagcagcaaagc ttgctgcataaaaaggaagcggggacgcctcctcctcctcctcctcctcctcctgtagaggggaagccaagaggacgggt ttaaatatgaacgaagacccgacggttaatttatcatggctgcctcaggatcacttagaaaccagcccaccaccagagaa catctcagctgcagtcacctctctcattccttccagtgaccccgaaccaggatttatagtaaacccttgggatgttgtct tatgtacttcaggaacactgatctcctgtgaaaatgctgttgtggtccttatcatcttccataatcccagtcttcgtgcc ccaatgttcctcctgataggcagcttggccttggcagatcttttagcaggaattggattgatcatcaattttctttttgc ttatcttctccagtcggactctaccaagctggtcacagttggtttgatcgtcgcctctttttctgcttctatctgcagtc tgttggccatcactgtggaccggtacctctccctttattatgctttgacttacaattctgagaggacggtgacttttacc tacattatgcttattctgctctggggtgcttcaatctgtgtgggagtcctgccagtcatgggatggaattgcctcaaaga tgagtccacctgcagcgttatcaggcccctcactaaaaataatgcggccatcctctcggtctctttcttgcttatgttcg ctctcatgttacagctgtacattcagatctgcaaaattgtgatgcgccatgctcaccagattgccttgcagcatcacttc ctagcaacttcccactatgtgaccacccggaaaggagtatcaactttagccattatcctgggaacctttgctgcttgctg gatgcctttcacactctattccttaatagctgactacacatatccctctatctacacctacgccaccttgcttccagcca catataattccatcatcaaccctgttatatatgctttccggaatcaagaaatacaaaaggcactttggctcatctgctgc ggctgcataccttcaaacatttctgcaagggccagatcacccagtgatgtttgattaacggtgcagaggaccattgttta tttagcattgtgatgtgtgagccctgctgctctcaataacattgtacataatagattcacagtcagtctgtggggagaat ttacattttttttaaaaaaaaaagcctgttgaccaaaataaaccatgttgtataagcccaggaa |
Protein
Protein ID | habu1_s536_g02512.t1 |
---|---|
Definition | - |
>habu1_s536_g02512.t1 MNEDPTVNLSWLPQDHLETSPPPENISAAVTSLIPSSDPEPGFIVNPWDVVLCTSGTLISCENAVVVLIIFHNPSLRAPM FLLIGSLALADLLAGIGLIINFLFAYLLQSDSTKLVTVGLIVASFSASICSLLAITVDRYLSLYYALTYNSERTVTFTYI MLILLWGASICVGVLPVMGWNCLKDESTCSVIRPLTKNNAAILSVSFLLMFALMLQLYIQICKIVMRHAHQIALQHHFLA TSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPVIYAFRNQEIQKALWLICCGC IPSNISARARSPSDV |