Gene
| Gene Model ID | habu1_s536_g02513 |
|---|---|
| Locus | habu1_scaffold536 : 3483561 ... 3497147 : - |
| To GenomeBrowser | habu1_scaffold536:3483561..3497147 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 12 | EC:3.4.22.0 GO:0004197 GO:0004843 GO:0006511 GO:0016579 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02513.t1 | 1 | 1 | UCH | 38 | 365 | 0.0 | 235.4 | 0.0 | 0.0 | 235.2 |
| habu1_s536_g02513.t1 | 1 | 1 | UCH_1 | 40 | 333 | 1.9e-39 | 135.8 | 6.19374e-43 | 2.3e-39 | 135.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02513.t1 | gi|148231175|ref|NP_001091528.1| | ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus] | 0.0 |
| habu1_s536_g02513.t1 | gi|466068127|ref|XP_004281823.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Orcinus orca] | 0.0 |
| habu1_s536_g02513.t1 | gi|395850175|ref|XP_003797673.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur garnettii] | 0.0 |
| habu1_s536_g02513.t1 | gi|301500675|ref|NP_872294.2| | ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens] | 0.0 |
| habu1_s536_g02513.t1 | gi|731494076|ref|XP_010592272.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Loxodonta africana] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.0 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 4.1 |
| Nose | 9.2 |
| Brain-1 | 5.7 |
| Eye | 5.2 |
| fetal fibroblast | 5.4 |
| venom gland-2 | 9.8 |
| Brain-2 | 6.7 |
| Spleen | 6.6 |
| Lung | 5.7 |
| Liver | 7.1 |
| Kidney | 9.4 |
| Pancreas | 9.4 |
| Small intestine | 16.7 |
| Large intestine | 11.1 |
| Stomach | 6.1 |
| heart | 3.3 |
| ovary | 9.0 |
| cheek muscle | 3.2 |
Transcript
| Transcript ID | habu1_s536_g02513.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02513.t1 gctcgccctttcgacggttagagccgtgacgggccgtttcgttagggcgggcggagccctggtgggttccgctgtgagcc gctgaaggtggcgccgccgccgccgccgggctgccctcttcctcctcaggcgggactcccccggcccggctcgacgttgt gattgggtgggagaagatggcgctgcgcggatggaaatcctaatgacagtctccaaaatagcttccatctgtaccatggg cgctaatgcctcagccttagagaaagaaattggtccagaacaattcccagtcaatgaacattattttggcttagtaaatt ttggaaatacatgctactgtaattcagttcttcaggcactttatttttgtcgaccatttcgagagaaagtcttggcatac aagagtcagcccagaaaaaaagagagtcttctcacctgcttagctgatctcttccacagtatagccacccagaagaagaa agttggagtgatacctcctaaaaagtttataacaagactacgaaaagagaatgagctgtttgacaattatatgcagcaag atgcacatgaatttctgaactatttgctgaatacagtggcagatattttgcaagaggagaaaaaacaagagaaacagaat ggtcgtctacctaatggcagcattgacagtgaaaacaataattccccagatcccacatgggttcatgaaatcttccaggg aacattaaccaatgaaacaagatgtctcacctgtgaaactataagcagcaaagatgaagattttttagatctttctgttg acgtggaacaaaatacttcaatcacacattgtttaaggggtttcagcaacacagaaaccctgtgcagtgaatataaatat tactgtgaagagtgtcgcagtaaacaggaagcacacaaaagaatgaaagtaaaaaagctgcctatgattcttgctctcca tctgaaaagatttaaatacatggaccagctacatcgatatacaaaactctcctatagggtagtattccctttagaacttc gactgtttaatacatctggtgatgccacaaatcctgacagaatgtatgatcttgtggcagtggtagttcactgtggaagt ggacctaacagaggacactatattgctattgtaaagagtcatgatttttggctgctctttgatgatgacatcgtagagaa aatagatgcccaagctattgaagatttctacgggttaacatcagatatctcaaaaaactcagaatctggttatattctct tctatcagtcccgggactgaatgtgtctgggcaaaaagttacttcctgcctcactgttctggataacatgaaaactacta cattagaagatagtaaaagcagagacaaaagaatgataatgtggtttgcgctgcaacaaacccaggtattccgagaggct ttcaaaaatcttcatattgcgctccatgaatttgctcaggggtcataaggacaaggctgatgcatcacaaatgcgctgga gaaacagatcagcttctcttgtaagaatttcccatcaagcaagttgtatctaacagacttgatcaaaagtccaattttgt ggatatattttcataatcttcggcatctttgatttcttgtcagtgttgcattaaatgcaagtgcaacaaagcaatataaa tttggcacattaatttatttggtagtactaaaaatgcacatgattcttgatcttgattttacctatattcagtttttaga tttttttttttttttgcacacataaatagagaattagcctaacagttgctttcttggccagaataaatttatagcatatg gttttgtga |
|
Protein
| Protein ID | habu1_s536_g02513.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02513.t1 MEILMTVSKIASICTMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESL LTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEEKKQEKQNGRLPNGSIDS ENNNSPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQE AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI VKSHDFWLLFDDDIVEKIDAQAIEDFYGLTSDISKNSESGYILFYQSRD |
|