Gene
| Gene Model ID | habu1_s536_g02514 |
|---|---|
| Locus | habu1_scaffold536 : 3505388 ... 3509332 : + |
| To GenomeBrowser | habu1_scaffold536:3505388..3509332 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l21 | GO:0003735 GO:0005840 GO:0006412 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02514.t2 | 1 | 1 | Ribosomal_L21e | 2 | 100 | 0.0 | 156.0 | 0.0 | 0.0 | 155.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 189.1 |
| Venom grand-1 | 977.5 |
| Pit, infrared sensing | 351.6 |
| Nose | 230.3 |
| Brain-1 | 53.4 |
| Eye | 195.6 |
| fetal fibroblast | 190.0 |
| venom gland-2 | 692.9 |
| Brain-2 | 39.0 |
| Spleen | 325.4 |
| Lung | 309.1 |
| Liver | 625.0 |
| Kidney | 457.6 |
| Pancreas | 778.1 |
| Small intestine | 554.8 |
| Large intestine | 290.8 |
| Stomach | 487.9 |
| heart | 238.2 |
| ovary | 50.3 |
| cheek muscle | 330.2 |
Transcript
| Transcript ID | habu1_s536_g02514.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02514.t1 ttacgactggtttagtcctcgacttacgaccggttggggtcgcgacattaaaaaggttgagaaccactgccgtaggttat cacattcagaaaagacaaagctcagatctttgtaatgtttttctaggacctaaaggctccctcttcttaaggtagaggct acatttgcaatcctttgcttgtagtctgacattggaatggacattgctgttttaatttcagaaatactttgctcttgttg cattcagttgagtcctaattattaatacaattatggtgtacatcaaagtaactacagttagattattaaaacaacaactt tttccatacttgcattttattaaactttgtgctctttcaaattattgaattggataatttgggatggaaagaattaaatt ttgaacagtgtagtttgaacaggttgttaacatttgagacacttgctttgtatactaggctactccatcctgtctgctgg ggacaggacaacaaatgtccagggtattgaataagggaaggttgatctagtgttggctgtcacaagcaaatcccatgtgt gtagtacgtccatcttagctgagtaaataagagttgatcagtcaagatgacaaacacaaaaggaaagaggagagggacac gttacatgttctcaagaccctttcgcaaacatggtgttgtccctcttgctacctacatgcgaatctataagaagggtgat attgttgatattaagggcacagggacagttcaaaaaggcatgccccacaaatgttaccatggcaagactggaagagtata taacattactcagcatgctgtgggcattattgtgaacaagaaggttaaaggcaagatccttgctaagagaatcaatgtgc gcattgaacacattaagcattctaagagcagagacagttttttgcagcgtgtgaaggaaaatgaaagaaagaaaaaggaa gcaaaagaaaagggcacttggtttgagttaaaacgccagcctgcacctccaagggaagctcactttgttagaactaatgg caaagagccagagttgctggaaccaattccttatgaattcatggcatagtgtgtatgaacaaaataaaataccttgaaaa ggactgaagt |
|
| Transcript ID | habu1_s536_g02514.t2 |
| Definition | - |
>habu1_s536_g02514.t2 cgtaggttatcacattcagaaaagacaaagctcagatctttgtaatgtttttctaggacctaaaggctccctcttcttaa ggtagaggctacatttgcaatcctttgcttgtagtctgacattggaatggacattgctgttttaatttcagaaatacttt gctcttgttgcattcagttgagtcctaattattaatacaattatggtgtacatcaaagtaactacagttagattattaaa acaacaactttttccatacttgcattttattaaactttgtgctctttcaaattattgaattggataatttgggatggaaa gaattaaattttgaacagtgtagtttgaacaggttgttaacatttgagacacttgctttgtatactaggctactccatcc tgtctgctggggacaggacaacaaatgtccagggtattgaataagggaaggttgatctagtgttggctgtcacaagcaaa tcccatgtgtgtagtacgtccatcttagctgagtaaataagagttgatcagtcaagatgacaaacacaaaaggaaagagg agagggacacgttacatgttctcaagaccctttcgcaaacatggtgttgtccctcttgctacctacatgcgaatctataa gaagggtgatattgttgatattaagggcacagggacagttcaaaaaggcatgccccacaaatgttaccatggcaagactg gaagagtatataacattactcagcatgctgtgggcattattgtgaacaagaaggttaaaggcaagatccttgctaagaga atcaatgtgcgcattgaacacattaagcattctaagagcagagacagttttttgcagcgtgtgaaggaaaatgaaagaaa gaaaaaggaagcaaaagaaaagggcacttggtttgagttaaaacgccagcctgcacctccaagggaagctcactttgtta gaactaatggcaaagagccagagttgctggaaccaattccttatgaattcatggcatagtgtgtatgaacaaaataaaat accttgaaaaggactgaagt |
|
Protein
| Protein ID | habu1_s536_g02514.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02514.t1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGTGTVQKGMPHKCYHGKTGRVYNITQHAVGIIVNKKV KGKILAKRINVRIEHIKHSKSRDSFLQRVKENERKKKEAKEKGTWFELKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA |
|
| Protein ID | habu1_s536_g02514.t2 |
| Definition | - |
>habu1_s536_g02514.t2 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGTGTVQKGMPHKCYHGKTGRVYNITQHAVGIIVNKKV KGKILAKRINVRIEHIKHSKSRDSFLQRVKENERKKKEAKEKGTWFELKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA |
|