Gene
| Gene Model ID | habu1_s536_g02515 |
|---|---|
| Locus | habu1_scaffold536 : 3525118 ... 3528813 : + |
| To GenomeBrowser | habu1_scaffold536:3525118..3528813 |
| Genes list of scaffold | habu1_scaffold536 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-like protein family member 11a | GO:0005525 GO:0005730 GO:0007264 GO:0016020 GO:0045943 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s536_g02515.t1 | 1 | 1 | Ras | 2 | 155 | 5.1e-23 | 81.2 | 8.8e-27 | 6.5e-23 | 80.8 |
| habu1_s536_g02515.t1 | 1 | 1 | Miro | 14 | 108 | 1.8e-12 | 47.7 | 3.7e-16 | 2.7e-12 | 47.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s536_g02515.t1 | gi|602671520|ref|XP_007441272.1| | PREDICTED: ras-like protein family member 11A, partial [Python bivittatus] | 0.0 |
| habu1_s536_g02515.t1 | gi|637338950|ref|XP_003225566.2| | PREDICTED: ras-like protein family member 11A [Anolis carolinensis] | 0.0 |
| habu1_s536_g02515.t1 | gi|530585889|ref|XP_005286717.1| | PREDICTED: ras-like protein family member 11A [Chrysemys picta bellii] | 0.0 |
| habu1_s536_g02515.t1 | gi|557290532|ref|XP_006027864.1| | PREDICTED: ras-like protein family member 11A [Alligator sinensis] | 0.0 |
| habu1_s536_g02515.t1 | gi|564257738|ref|XP_006267818.1| | PREDICTED: ras-like protein family member 11A [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.8 |
| Nose | 1.0 |
| Brain-1 | 1.4 |
| Eye | 0.5 |
| fetal fibroblast | 5.7 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.4 |
| Spleen | 0.7 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.4 |
| Small intestine | 0.1 |
| Large intestine | 1.7 |
| Stomach | 0.4 |
| heart | 0.4 |
| ovary | 14.3 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s536_g02515.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02515.t1 ggctcgcctttcccatgcggttctcgtcgatcatgtcccaaaattatctgctagcgcccatccaagaatgcccctccgat ttcctcgtcaaggatgtgaaattggcggtgctcggaacagggggcgtggggaagagcgccatgattgtacggttcctcac caaaagatttattggagactatgaacccaacactgggaatctgtattcaagacttgttcatatagaaggtgatcaaattt ttctgcagatccaagacacaccaggatgcatggagaaccaacaagacttgccgcagatgctggattcggtttctggctgt ctcaagtgggcagatggctttctcttagtctattcagttaccgaccatcatagctaccagttcattcggccactttttct acacatccagaagattcgccctgactcaaaaatcccagtcatcatcgtagggaacaaaggggatttgatgcattcccgac aggttgcagcaaatgatggcctacagttggccaatgaactgggtgttgtgtttctagaagtttcaacaagtgataactat caaggtgtatgtgatgtctttcaatatctttgtaaagaagttagtaaacagcacagttatggcagccgggacaaaagaag gtcatccatcatcccacgtcccaaatcaccaaacgtgcaagacctcaagagacgtttcaaacaggctctttcatccaaag tgaaatagacttgaaatggcctttgctcaaaactgttttattaactacacctttataagaagattttatttttgtattga tgctgttgatatgtacctagataaaaatatacaactttcttggaattactttc |
|
Protein
| Protein ID | habu1_s536_g02515.t1 |
|---|---|
| Definition | - |
>habu1_s536_g02515.t1 MIVRFLTKRFIGDYEPNTGNLYSRLVHIEGDQIFLQIQDTPGCMENQQDLPQMLDSVSGCLKWADGFLLVYSVTDHHSYQ FIRPLFLHIQKIRPDSKIPVIIVGNKGDLMHSRQVAANDGLQLANELGVVFLEVSTSDNYQGVCDVFQYLCKEVSKQHSY GSRDKRRSSIIPRPKSPNVQDLKRRFKQALSSKVK |
|