Gene
| Gene Model ID | habu1_s5419_g15745 |
|---|---|
| Locus | habu1_scaffold5419 : 1776 ... 16725 : - |
| To GenomeBrowser | habu1_scaffold5419:1776..16725 |
| Genes list of scaffold | habu1_scaffold5419 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein c9orf72 homolog | GO:0005615 GO:0005634 GO:0005764 GO:0005768 GO:0005776 GO:0006897 GO:0006914 GO:0017137 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5419_g15745.t1 | 1 | 1 | C9orf72-like | 60 | 325 | 0.0 | 287.6 | 0.0 | 0.0 | 287.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5419_g15745.t1 | gi|327263739|ref|XP_003216675.1| | PREDICTED: protein C9orf72 homolog [Anolis carolinensis] | 0.0 |
| habu1_s5419_g15745.t1 | gi|699610596|ref|XP_009873458.1| | PREDICTED: protein C9orf72 homolog [Apaloderma vittatum] | 0.0 |
| habu1_s5419_g15745.t1 | gi|700329493|ref|XP_009911613.1| | PREDICTED: protein C9orf72 homolog isoform X3 [Haliaeetus albicilla] | 0.0 |
| habu1_s5419_g15745.t1 | gi|488593674|ref|XP_004482062.1| | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 5.5 |
| Nose | 5.8 |
| Brain-1 | 10.5 |
| Eye | 3.2 |
| fetal fibroblast | 13.1 |
| venom gland-2 | 3.3 |
| Brain-2 | 11.1 |
| Spleen | 6.0 |
| Lung | 4.7 |
| Liver | 5.3 |
| Kidney | 2.3 |
| Pancreas | 3.2 |
| Small intestine | 2.6 |
| Large intestine | 2.7 |
| Stomach | 5.2 |
| heart | 4.2 |
| ovary | 43.8 |
| cheek muscle | 26.6 |
Transcript
| Transcript ID | habu1_s5419_g15745.t1 |
|---|---|
| Definition | - |
>habu1_s5419_g15745.t1 cggcccgctgggttggttatgtttataatcagcaatggctagtaaagggaggaggaggataatgtagtttcttggcgggc ttcggacagttacgcccatagcacacacactttttaggtttcaataatgtgactgctgaaatcatcatgtctggcctctg tcctcctccttctcctgctgttgccaagacagaaattgcactgagtggagaatcaccgttactagctgccacatttgcat attgggataatattcttggtcccagagtcagacatatttgggctccaaaaacggagcaacagcttctcagtgatggagaa ataacattccttgccaatcatactctcaatggagaaatacttcgaaatgccgagagtggtgcaatagatgtgaagttttt tgttttatctgagaaaggagtcattattgtgtctttaatttttgatggaaattggaatggagaccgaagtacatatggat tatcaataatacttccccagagtgagcttaatttctacctccccctgcatagagtgtgcgttgatagattgacacacatt ataaggaaaggaaggatatggatgcataaggaaagacaagaacatttccagaagtctattatggaaggtgcagaaagagt ggaagatcaaggccagagtattattcccatgctgacaggggaggttattcccgtgatggaactcctatcatccatgaaat cacacaatgttccagaagaaatagatatacatgataccgtgcttagtgatgatgacattggtgacagttgtcatgaaagt ttcctactcaaggccataagttcacatctgcaaacctgtggctgttcagttgttataggaagtagcgcagaaaaagttaa taagatagtacggacattgtgcctctttctcactccagcagagcgaaaatgttctcgcctgtgtagaaatgaaacctctt ttaagtatgagtcaggcctatttgtgcaagggttattgaaggatgtgactggaagctttgtgttgcctttccgccaagtg atgtatgccccataccctaccacacacatagatgtagatgttaacacagtgaaacagatgcctccatgccatgaacacat ttacaatcaacgacggtacatgagatctgaactaacagcattttggagagctactttggatgaagaaatgcctcaagata ccatcatctatacagatgaaagttttactcctgacttgtatgtatttttatggagtttacaaaaaagttagttggtactg tcctttgtgagtgaatacagcagacatttgaatatagatctgcatttttatgttggtg |
|
Protein
| Protein ID | habu1_s5419_g15745.t1 |
|---|---|
| Definition | - |
>habu1_s5419_g15745.t1 MSGLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQQLLSDGEITFLANHTLNGEILRNAESGAI DVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQSELNFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKSIME GAERVEDQGQSIIPMLTGEVIPVMELLSSMKSHNVPEEIDIHDTVLSDDDIGDSCHESFLLKAISSHLQTCGCSVVIGSS AEKVNKIVRTLCLFLTPAERKCSRLCRNETSFKYESGLFVQGLLKDVTGSFVLPFRQVMYAPYPTTHIDVDVNTVKQMPP CHEHIYNQRRYMRSELTAFWRATLDEEMPQDTIIYTDESFTPDLYVFLWSLQKS |
|