Gene
| Gene Model ID | habu1_s5419_g15747 |
|---|---|
| Locus | habu1_scaffold5419 : 143529 ... 211955 : - |
| To GenomeBrowser | habu1_scaffold5419:143529..211955 |
| Genes list of scaffold | habu1_scaffold5419 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5419_g15747.t1 | 8 | 1 | LRR_8 | 107 | 164 | 0.0 | 216.0 | 1.6e-13 | 1.9e-10 | 40.3 |
| habu1_s5419_g15747.t1 | 3 | 1 | LRR_4 | 108 | 143 | 8.9e-23 | 79.4 | 1.2e-06 | 0.0014 | 18.2 |
| habu1_s5419_g15747.t1 | 3 | 1 | LRR_5 | 115 | 208 | 3.2e-25 | 88.3 | 3.0e-09 | 3.4e-06 | 26.7 |
| habu1_s5419_g15747.t1 | 8 | 2 | LRR_8 | 128 | 188 | 0.0 | 216.0 | 2.5e-15 | 2.9e-12 | 46.1 |
| habu1_s5419_g15747.t1 | 8 | 3 | LRR_8 | 153 | 212 | 0.0 | 216.0 | 4.5e-15 | 5.2e-12 | 45.3 |
| habu1_s5419_g15747.t1 | 3 | 2 | LRR_4 | 153 | 188 | 8.9e-23 | 79.4 | 2.9e-07 | 0.00033 | 20.1 |
| habu1_s5419_g15747.t1 | 3 | 2 | LRR_5 | 171 | 279 | 3.2e-25 | 88.3 | 3.2e-13 | 3.7e-10 | 39.6 |
| habu1_s5419_g15747.t1 | 8 | 4 | LRR_8 | 176 | 236 | 0.0 | 216.0 | 2.2e-13 | 2.5e-10 | 39.9 |
| habu1_s5419_g15747.t1 | 8 | 5 | LRR_8 | 201 | 257 | 0.0 | 216.0 | 8.8e-13 | 1.0e-09 | 38.0 |
| habu1_s5419_g15747.t1 | 8 | 6 | LRR_8 | 225 | 280 | 0.0 | 216.0 | 3.1e-10 | 3.5e-07 | 29.8 |
| habu1_s5419_g15747.t1 | 8 | 7 | LRR_8 | 273 | 332 | 0.0 | 216.0 | 1.0e-11 | 1.2e-08 | 34.6 |
| habu1_s5419_g15747.t1 | 3 | 3 | LRR_5 | 287 | 401 | 3.2e-25 | 88.3 | 8.9e-12 | 1.0e-08 | 34.9 |
| habu1_s5419_g15747.t1 | 3 | 3 | LRR_4 | 297 | 336 | 8.9e-23 | 79.4 | 4.8e-09 | 5.4e-06 | 25.8 |
| habu1_s5419_g15747.t1 | 8 | 8 | LRR_8 | 345 | 404 | 0.0 | 216.0 | 1.9e-13 | 2.2e-10 | 40.1 |
| habu1_s5419_g15747.t1 | 1 | 1 | Ig_3 | 456 | 534 | 5.4e-08 | 33.2 | 8.9e-10 | 1.0e-06 | 29.1 |
| habu1_s5419_g15747.t1 | 1 | 1 | I-set | 462 | 547 | 3.0e-18 | 65.4 | 4.4e-21 | 5.0e-18 | 64.7 |
| habu1_s5419_g15747.t1 | 1 | 1 | V-set | 466 | 542 | 6.2e-07 | 29.3 | 2.2e-09 | 2.5e-06 | 27.3 |
| habu1_s5419_g15747.t1 | 1 | 1 | Ig_2 | 467 | 547 | 1.8e-06 | 28.0 | 1.5e-09 | 1.8e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5419_g15747.t1 | gi|602640387|ref|XP_007427008.1| | PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 [Python bivittatus] | 0.0 |
| habu1_s5419_g15747.t1 | gi|558172926|ref|XP_006125483.1| | PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2-like [Pelodiscus sinensis] | 0.0 |
| habu1_s5419_g15747.t1 | gi|697826211|ref|XP_009633555.1| | PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 [Egretta garzetta] | 0.0 |
| habu1_s5419_g15747.t1 | gi|591381912|ref|XP_007065488.1| | PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 [Chelonia mydas] | 0.0 |
| habu1_s5419_g15747.t1 | gi|700325013|ref|XP_009928650.1| | PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 [Haliaeetus albicilla] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 1.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.8 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s5419_g15747.t1 |
|---|---|
| Definition | - |
>habu1_s5419_g15747.t1 agtcgaggactaaaccggtccagatgccttacctcccttgggctgggccagctggtggtcggcctgctctgtctctgccg cttgccagctatgcctcggccggcacggggcggaaccacgcatgcgcggcgctctcgggcagggaaagtcctcgacttac gactggtttagtcctcgacttatgaccggttggggtcgcggcattaaaaagcagaaggtcgcaaaagctgatcacatgac cccgggacactgcaaccatcataaatatgaaccagttgcgaagcatctgaattttgatcacatgaccatgggggattgct gcaatggtcgatccaccctaggttgcccagctcgctgtgaatgctcagcacagaataagtctgtcagttgtcatcggagg cgcctgattgccatcccggagggcatccccatagagactaaaatcttggatcttagcaagaacaggctgaaaagtgtcaa tccggaggagttcacagctttccctttgcttgaagaaatagatctcagcgacaacatcgtggccaatgttgagcctgggg cctttaacagcctatttaatttgcgctctttgcgactgaaagggaatcgtctgaagctggtccctttaggggtcttcacc ggcttgtcaaacttaacaaagctggatattagtgagaacaagattgtcatcctgctggattacatgttccaggatctgca caacctcaaatcccttgaggttggggataatgatctggtttacatctcccacagggcctttaatggattgcttagtctgg agcaccttactctggaaaaatgcaacctaacagctgtaccaacagaggccctttcctaccttcacaacctcatcagcctg cacctgagacatctcaatatcaacctgttgcctgcatatgcctttaagagattgttccacctgaaaaacctagaaataga ttattggcctatgcttgacacaatccctcccaacagtctttatggcctgaacctcacttctctctccattaccaatacca atttgtccaccatcccttatgctgctctgaagcatctggtttacctgacccacctgaatctttcctacaatcccataagc acaatcgaatcgggcatgcttgcagacgtgttgcgcctgcaagagttgcacatagcgggggcccagctgcacaccattga acctcatgctttccaaggccttcgattcctccgcgtgttgaacgtgtcccaaaacctgttggaaactctggaggagaatg tgttccattccgtcaaatccctggaagttctctgcataagcaacaatcccctggcttgtgactgccgcttgctctggatc ttacaaaggcagcccatgctgcagtttggtggccggcaaccaatgtgtgccggcccagacagtgtcaaagagaggccatt taaagacttccacagcacggccctttctttctacttcacttgcaagaagcccaggatctatgaaaagaagctgcagtact tggtggttgaagaagggcagacagtgcagttcttgtgtcatgcagaaggagatcctcagccaaccatcgcctggttgaca ccgcgacggagactggtcaccgcaaaatccagcgggagagcaacagtgcttggagatggtacacttgagatccggtttgc ccaagatcaagatagtggggtttatgtttgtgtggccagcaacgctgctggaaatgacacctcctcagccaccctcaccg tcaaggggtttgcctcagatcgttttctttacgccaacaggactcctatgtacatgacagattccaatgacaccagttcc aatggaaccaatgtgaatacatttgctctggaccttaagacaatactggtgtcgacggccatgggctgtttcacattcct tggggttgttttattttgtttcttactactttttgtgtggagccgtgggaaaggcaagcataaaaccagcatcgacctcg agtacgtcccccgtaaaaacaatggcgcagtggtggaaggggaggtttcaggaccacgcaggttcaatatgaaaatgatt tgatggttgtgctctagcgttattaattttgcccctt |
|
Protein
| Protein ID | habu1_s5419_g15747.t1 |
|---|---|
| Definition | - |
>habu1_s5419_g15747.t1 MRGALGQGKSSTYDWFSPRLMTGWGRGIKKQKVAKADHMTPGHCNHHKYEPVAKHLNFDHMTMGDCCNGRSTLGCPARCE CSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFTAFPLLEEIDLSDNIVANVEPGAFNSLFNLRSLRLK GNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFNGLLSLEHLTLEKCNLTAVP TEALSYLHNLISLHLRHLNINLLPAYAFKRLFHLKNLEIDYWPMLDTIPPNSLYGLNLTSLSITNTNLSTIPYAALKHLV YLTHLNLSYNPISTIESGMLADVLRLQELHIAGAQLHTIEPHAFQGLRFLRVLNVSQNLLETLEENVFHSVKSLEVLCIS NNPLACDCRLLWILQRQPMLQFGGRQPMCAGPDSVKERPFKDFHSTALSFYFTCKKPRIYEKKLQYLVVEEGQTVQFLCH AEGDPQPTIAWLTPRRRLVTAKSSGRATVLGDGTLEIRFAQDQDSGVYVCVASNAAGNDTSSATLTVKGFASDRFLYANR TPMYMTDSNDTSSNGTNVNTFALDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKTSIDLEYVPRKNNGAVVEG EVSGPRRFNMKMI |
|