Gene
| Gene Model ID | habu1_s541_g02552 |
|---|---|
| Locus | habu1_scaffold541 : 561152 ... 578640 : - |
| To GenomeBrowser | habu1_scaffold541:561152..578640 |
| Genes list of scaffold | habu1_scaffold541 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| spartin isoform x1 | GO:0005741 GO:0005811 GO:0005886 GO:0009838 GO:0030496 GO:0030514 GO:0031625 GO:0034389 GO:0045202 GO:0048698 GO:0050905 GO:0051301 GO:0051881 GO:0060612 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s541_g02552.t2 | 1 | 1 | MIT | 22 | 96 | 1.3e-11 | 44.1 | 1.4e-14 | 5.1e-11 | 42.2 |
| habu1_s541_g02552.t2 | 1 | 1 | Senescence | 409 | 595 | 0.0 | 175.6 | 0.0 | 0.0 | 174.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s541_g02552.t2 | gi|700392041|ref|XP_009936422.1| | PREDICTED: spartin isoform X1 [Opisthocomus hoazin] | 0.0 |
| habu1_s541_g02552.t2 | gi|699680358|ref|XP_009886702.1| | PREDICTED: spartin isoform X1 [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 5.3 |
| Pit, infrared sensing | 4.2 |
| Nose | 5.5 |
| Brain-1 | 5.1 |
| Eye | 20.5 |
| fetal fibroblast | 4.1 |
| venom gland-2 | 8.4 |
| Brain-2 | 11.0 |
| Spleen | 3.0 |
| Lung | 3.9 |
| Liver | 18.4 |
| Kidney | 22.9 |
| Pancreas | 6.4 |
| Small intestine | 8.3 |
| Large intestine | 7.6 |
| Stomach | 2.2 |
| heart | 6.9 |
| ovary | 66.2 |
| cheek muscle | 14.8 |
Transcript
| Transcript ID | habu1_s541_g02552.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02552.t1 ggctcagccgggatgcgatgttgcggtgctggaagtgacctgtggactgcagacgcgtagaggccctgcggttggtgcag gcttggcaggaagaatcctgtaaatccaaaggtcgagcctcgcgaaaactggctggttggtctggacttgcaggaggttc cttggctgtgtgcagtaatggatcaaggtcaggattcagctatgcaagaaaatgaaaatgcaagagcaattgaagatgag tacaagaaagcttttgtgtttgttaataaagctttgaatgcagatgaattgggtcaaatagaagaagcaaagaattatta taggcaggggcttactcacttatgcaaaggagttagtattccatcagaaggtcttgaaggcaccaagggctatgctgtac ctattaggcaaatgcagcaaaagatgagagaaactttagaaaatgttactgctcgtttgagacttctagatgaaaattct caagcaagtatcactgccattagttccaatataaggatgcccagattatacccaacaattccatctaaagaaaagactga gaggccttcggtgcccagctcattgacatcaccccctcaaccactttcaagccatggaaatattggatctacaagccaag tgcagatggctgcagtgagtccatcaacttcaatgcccaatgaagcacctcctgcttatactccagaggccactgatggc cactatactgtgtcttatgggacagaatctggggaattctcatctgttggagatgattactatacaaaatgtactcagcc acctcctgttgataattttggagtagatgctgatgaattaatcctcattccccatggtgtgcagattttctatgtcaccc ctgatggacaagttagtgctccctcctatcctggatatcttcgcattgtaaagtttttggatacagatgttgcaacagcc cagaatcatcctcctgctttccttcaggtttgtgactggctatatccccttatgtgcggccagtcacctgttctctcatg cagctccggagtatatatgttccccgatatgatgtcacgggtatcaggatcctatgtaggagtagtgttgtcttcagagc ttccaatcgctgaacgagaactatttgaagatctgctgaaacagatgactgaccttagaatacagaatgctgaagcttca agtgatgtgatcaaccttggtcagactgtacatattcaaccaatgcctgaagagagagatcgtgaattacctgactggag tgagaaaatagcacatggcatcttatcaggagcctcctggttgagctggggtctggtcaaaggagcagaatatactggaa aagcaatccacaaaggagcctctaaattaagagaacacattcacccagaagaaaaacctttggaggtcaacccaactgta gcaaagggattgcatgtggcaaggcaagctacagggggagcagtcaaagtcagtcagttcttggttgaaggtgtttgttc tgtggcaagttgtgttggcagagagttagcccctcatgtgaagaaacacggaagcaaactggttccagaatcccttaaga aagacaaagatggaaaatcaactttggatggtgctctagttgtagcagcaagcggaattcaagggttttcgacagtttgg cagggtttggaatgtgctgcaaaatgcattgctaaaaatgtatctactgagacagttcagacagtcaagtacaagtatgg gaatgatgctggccaagctacaaataatgctgtgagttctgccatcaatgttggtgtaacagcgtttaatattgaccata ttggaatcaaagctatggtcaagaaaactgcaaaggaaacaggcaacacaatcctggatgattataagattaccgaaaag gatgaaaataaagctctacaaaagagagaaaaaaaagatgaacactaaatctgtgcaactgaattgccaaaagccttaat atatatttaaatgaaatgaattaac |
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| Transcript ID | habu1_s541_g02552.t2 |
| Definition | - |
>habu1_s541_g02552.t2 ggctcagccgggatgcgatgttgcggtgctggaagtgacctgtggactgcagacgcgtagaggccctgcggttggtgcag gcttggcaggaagaatcctgtaaatccaaaggtcgagcctcgcgaaaactggctggttggtctggacttgcaggaggttc cttggctgtgtgcagtaatggatcaaggtcaggattcagctatgcaagaaaatgaaaatgcaagagcaattgaagatgag tacaagaaagcttttgtgtttgttaataaagctttgaatgcagatgaattgggtcaaatagaagaagcaaagaattatta taggcaggggcttactcacttatgcaaaggagttagtattccatcagaaggtcttgaaggcaccaagggctatgctgtac ctattaggcaaatgcagcaaaagatgagagaaactttagaaaatgttactgctcgtttgagacttctagatgaaaattct caagcaagtatcactgccattagttccaatataaggatgcccagattatacccaacaattccatctaaagaaaagactga gaggccttcggtgcccagctcattgacatcaccccctcaaccactttcaagccatggaaatattggatctacaagccaag tgcagatggctgcagtgagtccatcaacttcaatgcccaatgaagcacctcctgcttatactccagaggccactgatggc cactatactgtgtcttatgggacagaatctggggaattctcatctgttggagatgattactatacaaaatgtactcagcc acctcctgttgataattttggagtagatgctgatgaattaatcctcattccccatggtgtgcagattttctatgtcaccc ctgatggacaagttagtgctccctcctatcctggatatcttcgcattgtaaagtttttggatacagatgttgcaacagcc cagaatcatcctcctgctttccttcaggtttgtgactggctatatccccttatgtgcggccagtcacctgttctctcatg cagctccggagtatatatgttccccgatatgatgtcacgggtatcaggatcctatgtaggagtagtgttgtcttcagagc ttccaatcgctgaacgagaactatttgaagatctgctgaaacagatgactgaccttagaatacaggctccaagatcccat gagggaatagggtttccatcaggatgccaaagatcttacaaagaacttattgaggatatattaaaacagatatcagatct tggaactaagaatgctgaagcttcaagtgatgtgatcaaccttggtcagactgtacatattcaaccaatgcctgaagaga gagatcgtgaattacctgactggagtgagaaaatagcacatggcatcttatcaggagcctcctggttgagctggggtctg gtcaaaggagcagaatatactggaaaagcaatccacaaaggagcctctaaattaagagaacacattcacccagaagaaaa acctttggaggtcaacccaactgtagcaaagggattgcatgtggcaaggcaagctacagggggagcagtcaaagtcagtc agttcttggttgaaggtgtttgttctgtggcaagttgtgttggcagagagttagcccctcatgtgaagaaacacggaagc aaactggttccagaatcccttaagaaagacaaagatggaaaatcaactttggatggtgctctagttgtagcagcaagcgg aattcaagggttttcgacagtttggcagggtttggaatgtgctgcaaaatgcattgctaaaaatgtatctactgagacag ttcagacagtcaagtacaagtatgggaatgatgctggccaagctacaaataatgctgtgagttctgccatcaatgttggt gtaacagcgtttaatattgaccatattggaatcaaagctatggtcaagaaaactgcaaaggaaacaggcaacacaatcct ggatgattataagattaccgaaaaggatgaaaataaagctctacaaaagagagaaaaaaaagatgaacactaaatctgtg caactgaattgccaaaagccttaatatatatttaaatgaaatgaattaac |
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Protein
| Protein ID | habu1_s541_g02552.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02552.t1 MDQGQDSAMQENENARAIEDEYKKAFVFVNKALNADELGQIEEAKNYYRQGLTHLCKGVSIPSEGLEGTKGYAVPIRQMQ QKMRETLENVTARLRLLDENSQASITAISSNIRMPRLYPTIPSKEKTERPSVPSSLTSPPQPLSSHGNIGSTSQVQMAAV SPSTSMPNEAPPAYTPEATDGHYTVSYGTESGEFSSVGDDYYTKCTQPPPVDNFGVDADELILIPHGVQIFYVTPDGQVS APSYPGYLRIVKFLDTDVATAQNHPPAFLQVCDWLYPLMCGQSPVLSCSSGVYMFPDMMSRVSGSYVGVVLSSELPIAER ELFEDLLKQMTDLRIQNAEASSDVINLGQTVHIQPMPEERDRELPDWSEKIAHGILSGASWLSWGLVKGAEYTGKAIHKG ASKLREHIHPEEKPLEVNPTVAKGLHVARQATGGAVKVSQFLVEGVCSVASCVGRELAPHVKKHGSKLVPESLKKDKDGK STLDGALVVAASGIQGFSTVWQGLECAAKCIAKNVSTETVQTVKYKYGNDAGQATNNAVSSAINVGVTAFNIDHIGIKAM VKKTAKETGNTILDDYKITEKDENKALQKREKKDEH |
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| Protein ID | habu1_s541_g02552.t2 |
| Definition | - |
>habu1_s541_g02552.t2 MDQGQDSAMQENENARAIEDEYKKAFVFVNKALNADELGQIEEAKNYYRQGLTHLCKGVSIPSEGLEGTKGYAVPIRQMQ QKMRETLENVTARLRLLDENSQASITAISSNIRMPRLYPTIPSKEKTERPSVPSSLTSPPQPLSSHGNIGSTSQVQMAAV SPSTSMPNEAPPAYTPEATDGHYTVSYGTESGEFSSVGDDYYTKCTQPPPVDNFGVDADELILIPHGVQIFYVTPDGQVS APSYPGYLRIVKFLDTDVATAQNHPPAFLQVCDWLYPLMCGQSPVLSCSSGVYMFPDMMSRVSGSYVGVVLSSELPIAER ELFEDLLKQMTDLRIQAPRSHEGIGFPSGCQRSYKELIEDILKQISDLGTKNAEASSDVINLGQTVHIQPMPEERDRELP DWSEKIAHGILSGASWLSWGLVKGAEYTGKAIHKGASKLREHIHPEEKPLEVNPTVAKGLHVARQATGGAVKVSQFLVEG VCSVASCVGRELAPHVKKHGSKLVPESLKKDKDGKSTLDGALVVAASGIQGFSTVWQGLECAAKCIAKNVSTETVQTVKY KYGNDAGQATNNAVSSAINVGVTAFNIDHIGIKAMVKKTAKETGNTILDDYKITEKDENKALQKREKKDEH |
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