Gene
| Gene Model ID | habu1_s541_g02554 |
|---|---|
| Locus | habu1_scaffold541 : 675061 ... 679174 : + |
| To GenomeBrowser | habu1_scaffold541:675061..679174 |
| Genes list of scaffold | habu1_scaffold541 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s541_g02554.t1 | 1 | 1 | RFXA_RFXANK_bdg | 59 | 219 | 0.0 | 198.0 | 0.0 | 0.0 | 197.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s541_g02554.t1 | gi|602661823|ref|XP_007436559.1| | PREDICTED: regulatory factor X-associated protein [Python bivittatus] | 0.0 |
| habu1_s541_g02554.t1 | gi|637285622|ref|XP_008106104.1| | PREDICTED: regulatory factor X-associated protein [Anolis carolinensis] | 0.0 |
| habu1_s541_g02554.t1 | gi|543340308|ref|XP_005516827.1| | PREDICTED: regulatory factor X-associated protein [Pseudopodoces humilis] | 0.0 |
| habu1_s541_g02554.t1 | gi|564257078|ref|XP_006267500.1| | PREDICTED: regulatory factor X-associated protein [Alligator mississippiensis] | 0.0 |
| habu1_s541_g02554.t1 | gi|641751268|ref|XP_008167134.1| | PREDICTED: regulatory factor X-associated protein [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 3.0 |
| Nose | 4.1 |
| Brain-1 | 1.3 |
| Eye | 3.3 |
| fetal fibroblast | 1.5 |
| venom gland-2 | 2.7 |
| Brain-2 | 1.7 |
| Spleen | 2.5 |
| Lung | 2.2 |
| Liver | 2.3 |
| Kidney | 2.6 |
| Pancreas | 1.9 |
| Small intestine | 2.1 |
| Large intestine | 1.9 |
| Stomach | 2.0 |
| heart | 1.9 |
| ovary | 0.7 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s541_g02554.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02554.t1 atgctgcagcctcaggtggtacagcccgcgcaggctgtctccaaggcgccgtccgcccaaggcgggctcatgctcttcta cgagctggggcctgcgggcgacgccgaaggggatagcgaaggcggcgccggggccacgggcgcggacggcgcgtgcagtc ctgccggcggcctggaggacctggacgacgaggatgagagcggcgctcagtcggggggaggcggcggcggcggcgggtgt aaaagctgcacgtacgagggttgcaacgagaccaccacccaagtggcgaagcagcgcaagccttggatgtgcaagaggca ccggaacaagatgtacaaggataagtacaagcgcaagaagagcgaccaggccctcggaggaggaggcggcggcggcggcg gcgttggcggcgcaggcggcggtggtaacgccccctgctcggctaccgctgttgtggcggcggcggcggtggcggcggcg gcggctggaggtgcactttcggggagcagcgggcgcattgaggattgcactgaaacttccgtttctgtatcaaagcaaag aacaggtagtattggagatcggcctgcaaaacctacacttttggaacaggtgctaaatcagaaaaggctgtcacttctga gaagtcctgaagttgtacaatttctgcaaaaacgacaacaactgctaagtcaacaagcattggaacaaagacaacaacag ttttcaggcgcaccaatgtaacagcaaatttcatagcagaagtaaacactattataatggggtctactgaatttctgtaa ctgttgtagttagtttcattttctgtattgcccttttgcttttttctttggttttatttgaaattgacgttttaaattgt ttttatgagctttgtgcagcttctcccctcaattacaaacttccactgattcattttggaagttatattgatgtttttgg gaaagataaactgataaacaagctgctttttattttatgcaaactaaccttgcataaagttattattttatgacattcat |
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Protein
| Protein ID | habu1_s541_g02554.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02554.t1 MLFYELGPAGDAEGDSEGGAGATGADGACSPAGGLEDLDDEDESGAQSGGGGGGGGCKSCTYEGCNETTTQVAKQRKPWM CKRHRNKMYKDKYKRKKSDQALGGGGGGGGGVGGAGGGGNAPCSATAVVAAAAVAAAAAGGALSGSSGRIEDCTETSVSV SKQRTGSIGDRPAKPTLLEQVLNQKRLSLLRSPEVVQFLQKRQQLLSQQALEQRQQQFSGAPM |
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