Gene
| Gene Model ID | habu1_s541_g02555 |
|---|---|
| Locus | habu1_scaffold541 : 682897 ... 754890 : - |
| To GenomeBrowser | habu1_scaffold541:682897..754890 |
| Genes list of scaffold | habu1_scaffold541 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mothers against decapentaplegic homolog 9 isoform x2 | GO:0001657 GO:0003677 GO:0003700 GO:0005634 GO:0005667 GO:0005737 GO:0006468 GO:0007179 GO:0030509 GO:0030901 GO:0030902 GO:0045449 GO:0051216 GO:0060348 GO:0071407 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s541_g02555.t1 | 1 | 1 | MH1 | 37 | 80 | 7.7e-18 | 64.3 | 6.4e-21 | 2.4e-17 | 62.8 |
| habu1_s541_g02555.t1 | 1 | 1 | MH2 | 212 | 388 | 0.0 | 260.3 | 0.0 | 0.0 | 259.9 |
| habu1_s541_g02555.t1 | 1 | 1 | IRF-3 | 267 | 347 | 1.7e-06 | 27.7 | 8.1e-10 | 3.0e-06 | 26.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s541_g02555.t1 | gi|602661821|ref|XP_007436558.1| | PREDICTED: mothers against decapentaplegic homolog 9 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s541_g02555.t1 | gi|602661819|ref|XP_007436557.1| | PREDICTED: mothers against decapentaplegic homolog 9 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s541_g02555.t1 | gi|327268829|ref|XP_003219198.1| | PREDICTED: mothers against decapentaplegic homolog 9 [Anolis carolinensis] | 0.0 |
| habu1_s541_g02555.t1 | gi|663290005|ref|XP_008501367.1| | PREDICTED: mothers against decapentaplegic homolog 9 isoform X2 [Calypte anna] | 0.0 |
| habu1_s541_g02555.t1 | gi|694841180|ref|XP_009461326.1| | PREDICTED: mothers against decapentaplegic homolog 9 isoform X2 [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.9 |
| Nose | 0.3 |
| Brain-1 | 0.6 |
| Eye | 0.5 |
| fetal fibroblast | 2.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.8 |
| Spleen | 0.1 |
| Lung | 1.3 |
| Liver | 2.7 |
| Kidney | 0.1 |
| Pancreas | 0.1 |
| Small intestine | 1.4 |
| Large intestine | 2.0 |
| Stomach | 1.0 |
| heart | 0.8 |
| ovary | 0.1 |
| cheek muscle | 1.7 |
Transcript
| Transcript ID | habu1_s541_g02555.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02555.t1 gtaatcatagaaaagcgccacctgaggctgatgaggctctcgtcatgtggaatccagaagctttggaccaattcttataa ctgccatctagggttctgtgtttctcatttgatcagcacaatttatcttttaactggagctgctagagtgtggcgctggc ctgatctacagtctcatcatgagttaaaacctctggaatgctgtgaattcccatttggctcaaagcagaaagaagtctgc attaatccttaccattatcgaagagtggaaaccccagtgttacctccagtgttggttccaagacatagtgaattcaaccc acatcttagcctccttgccaaattccggaacacatctcttcacagtgagccactgatgcctcacaatgcaacttaccctg attctttccagcagcctccctgcatcactttcccagcatcccccaatatgtactctcagtcatcaagcagtatgagctac ccagactccccgggaaattcttctgcaccgggaagtccttatgagctcacagctgatacacctcctccaccttataatgc cagagaaacaccacgaaaccacaatggatgtcctgtacatgcagttatagacagtccattagtgctgtcattgcccaatg gagacttccgacctgtttgctatgaggaaccacagcattggtgttcagttgcatactatgaacttaataacagagttgga gagacatttcaggcctcttctcgaagcatactaatagatggctttacagatccttcaaacaataagaacagattttgcct tggattgctgtccaacgttaacaggaactctactatagaaaacaccagaaggcacataggaaaaggtgttcacctgtatt atgttgggggagaggtatatgcagagtgtgtgagcgacagcagcatttttgtacagagccgcaactgtaactatcagcat ggtttccacccagccactgtctgcaaaatccccagtggatgcagcttgaagattttcaacaaccaactcttcgctcagtt gcttgcccagtcagttaaccatggcttcgaggtggtgtatgagctaaccaagatgtgcaccatccggatgagctttgtta aaggctggggagcagaataccatcgccaggatgttacaagtactccttgttggattgagatccatcttcatggacctttg caatggctagataaggtcaactattcccttatttaaaaacctgtaggaaaaaagtctgtttttattgattaaaaattgaa ctttattaatgattc |
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Protein
| Protein ID | habu1_s541_g02555.t1 |
|---|---|
| Definition | - |
>habu1_s541_g02555.t1 MRLSSCGIQKLWTNSYNCHLGFCVSHLISTIYLLTGAARVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYRRVE TPVLPPVLVPRHSEFNPHLSLLAKFRNTSLHSEPLMPHNATYPDSFQQPPCITFPASPNMYSQSSSSMSYPDSPGNSSAP GSPYELTADTPPPPYNARETPRNHNGCPVHAVIDSPLVLSLPNGDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSI LIDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKI PSGCSLKIFNNQLFAQLLAQSVNHGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVNYSL I |
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