Gene
| Gene Model ID | habu1_s569_g02700 |
|---|---|
| Locus | habu1_scaffold569 : 10566 ... 27745 : + |
| To GenomeBrowser | habu1_scaffold569:10566..27745 |
| Genes list of scaffold | habu1_scaffold569 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pleckstrin homology domain-containing family h member 3 isoform x2 | GO:0005856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s569_g02700.t4 | 1 | 1 | MyTH4 | 193 | 303 | 5.8e-20 | 71.3 | 1.3e-23 | 9.6e-20 | 70.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s569_g02700.t4 | gi|543291270|ref|XP_005429675.1| | PREDICTED: pleckstrin homology domain-containing family H member 3 [Geospiza fortis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.3 |
| Venom grand-1 | 2.6 |
| Pit, infrared sensing | 4.2 |
| Nose | 3.4 |
| Brain-1 | 1.2 |
| Eye | 5.0 |
| fetal fibroblast | 3.1 |
| venom gland-2 | 1.4 |
| Brain-2 | 1.3 |
| Spleen | 1.7 |
| Lung | 3.7 |
| Liver | 1.1 |
| Kidney | 1.1 |
| Pancreas | 1.4 |
| Small intestine | 1.9 |
| Large intestine | 2.7 |
| Stomach | 2.4 |
| heart | 2.9 |
| ovary | 1.0 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s569_g02700.t1 |
|---|---|
| Definition | - |
>habu1_s569_g02700.t1 aggtcaaggcgccaaaaggttcccttcgctttctgtaagcgcgccctgggcgcttcaatcaaccagcccagcccggcctg cccaacccttccttccttccttcccttcctttccttccttccttccctccctctctgcttttaccgcgcagaccgaaact acggatgccgttccccggcggcttatggtggctgctgtgctgcaggcaaggcttcaccttgctgcgacgcgactactgtg aggcaagcaagggggtggccggtgaagaagaagttgaagaaacctttgaattacgcaggcaaggcgatgaggactctatc ttgcaagtgaacctcactcaacccagttgtgctagcagttgttccgaaaggtctttgccagtgactgaagagacacacag tcttatcacagagaactgtggaaggatgcaatatgaacctgatgctattgtgaaaggctggctgcagagagaggtccgag gaggtattaaaactccctggctgcgtcctcgcaaatactggtttgtgttgacagaagattccctagactactacagcggg tgtgaggtgagcgcccaacgccttggatcccttgttctcactagcctctgctctgtgctgtggcctgacaagcaaaccta taaggaaacaggctactgggcagtgacagtttttggcagaaagcactgctaccgactctatacagaacacttaaatgaag ctgtacactgggtttgtgctttgcagaaggttatcatcagcaaggcccctttgcagacccccacacaactcctcatgcgt gacattgaggagaaccgcgacagcccagaaatcttggatcaaatttatcgcaataatcccatcctatgttatacagctgg gccaatttatgcacctcttctgcccttcccttatgcagctcagggtggccaaggttatgcagggcttcgtgatgaagctg tcaaactcttccattcactacaacagcttgaagaaatgcgagatccaatccttctcatgcagggggtgctgcaaacttgc catgaccttccagccctggtggatgaaatattctgccaactggtgaaacagacaacagagccacctattacaggggcacc cacagatttgcgctattggcagctgcttgtgtgcatgagctacacatttataccttctgtgcctatactctgctatttgc atctgcatctacagcggatggagaaattgttcccaagatcaccagtgacccactatggacatttaatcacacaagctctg cacaaaagcaaagggcgggagtgtgtgccctccttggatgagattgtagcactaataggaagccaggaaatcccacactc cacacattgtactggtactaccacctgttatgtggccatcacatctaatgctacagcccagaagggccttttgtgttagg gcattgtctattggattttggatcttctttggccaaacaataagtagagaagcaagaacatctacacagtggtaccctga aggccatttctctgatgtgggtcatcatctgttaaagaaatggagtatgggacagctgaaggcatggaagcctctctgaa tcagtctggaaagtgattagctctgctctttccaggttatcctcagatgaagacaattctgcagcatcaacagacaagca tgttcagcttcaagaactcccagtaatcacacgaacagggaaatattccccaaaatgccagtggtagaattttgagttga ctcctatgtattctggcaggaatcttggatcagcatatattctggtcattgaaaggaataatagtgatattgttcgctcc taaggagctgataaactatgtcttctatatcagtggc |
|
| Transcript ID | habu1_s569_g02700.t2 |
| Definition | - |
>habu1_s569_g02700.t2 aggtcaaggcgccaaaaggttcccttcgctttctgtaagcgcgccctgggcgcttcaatcaaccagcccagcccggcctg cccaacccttccttccttccttcccttcctttccttccttccttccctccctctctgcttttaccgcgcagaccgaaact acggatgccgttccccggcggcttatggtggctgctgtgctgcaggcaaggcttcaccttgctgcgacgcgactactgtg aggcaagcaagggggtggccggtgaagaagaagttgaagaaacctttgaattacgcaggcaaggcgatgaggactctatc ttgcaagtgaacctcactcaacccagttgtgctagcagttgttccgaaaggtctttgccagtgactgaagagacacacag tcttatcacagagaactgtggaaggatgcaatatgaacctgatgctattgtgaaaggctggctgcagagagaggtccgag gaggtattaaaactccctggctgcgtcctcgcaaatactggtttgtgttgacagaagattccctagactactacagcggg tgtgaggtgagcgcccaacgccttggatcccttgttctcactagcctctgctctgtgctgtggcctgacaagcaaaccta taaggaaacaggctactgggcagtgacagtttttggcagaaagcactgctaccgactctatacagaacacttaaatgaag ctgtacactgggtttgtgctttgcagaaggttatcatcagcaaggcccctttgcagacccccacacaactcctcatgcgt gacattgaggagaaccgcgacagcccagaaatcttggatcaaatttatcgcaataatcccatcctatgttatacagctgg gccaatttatgcacctcttctgcccttcccttatgcagctcagggtggccaaggttatgcagggcttcgtgatgaagctg tcaaactcttccattcactacaacagcttgaagaaatgcgagatccaatccttctcatgcagggggtgctgcaaacttgc catgaccttccagccctggtggatgaaatattctgccaactggtgaaacagacaacagagccacctattacaggggcacc cacagatttgcgctattggcagctgcttgtgtgcatgagctacacatttataccttctgtgcctatactctgctatttgc atctgcatctacagcgggccttttgtgttagggcattgtctattggattttggatcttctttggccaaacaataagtaga gaagcaagaacatctacacagtggtaccctgaaggccatttctctgatgtgggtcatcatctgttaaagaaatggagtat gggacagctgaaggcatggaagcctctctgaatcagtctggaaagtgattagctctgctctttccaggttatcctcagtt gtccaagagatggaaggtatttggaaggcagttatatcctgggaggacactagtgtttatctgcctccaaagacctgttg ctttcttttttcagatgaagacaattctgcagcatcaacagacaagcatgttcagcttcaagaactcccagtaatcacac gaacagggaaatattccccaaaatgccagtggtagaattttgagttgactcctatgtattctggcaggaatcttggatca gcatatattctggtcattgaaaggaataatagtgatattgttcgctcctaaggagctgataaactatgtcttctatatca gtggc |
|
| Transcript ID | habu1_s569_g02700.t3 |
| Definition | - |
>habu1_s569_g02700.t3 aggtcaaggcgccaaaaggttcccttcgctttctgtaagcgcgccctgggcgcttcaatcaaccagcccagcccggcctg cccaacccttccttccttccttcccttcctttccttccttccttccctccctctctgcttttaccgcgcagaccgaaact acggatgccgttccccggcggcttatggtggctgctgtgctgcaggcaaggcttcaccttgctgcgacgcgactactgtg aggcaagcaagggggtggccggtgaagaagaagttgaagaaacctttgaattacgcaggcaaggcgatgaggactctatc ttgcaagtgaacctcactcaacccagttgtgctagcagttgttccgaaaggtctttgccagtgactgaagagacacacag tcttatcacagagaactgtggaaggatgcaatatgaacctgatgctattgtgaaaggctggctgcagagagaggtccgag gaggtattaaaactccctggctgcgtcctcgcaaatactggtttgtgttgacagaagattccctagactactacagcggg tgtgaggtgagcgcccaacgccttggatcccttgttctcactagcctctgctctgtgctgtggcctgacaagcaaaccta taaggaaacaggctactgggcagtgacagtttttggcagaaagcactgctaccgactctatacagaacacttaaatgaag ctgtacactgggtttgtgctttgcagaaggttatcatcagcaaggcccctttgcagacccccacacaactcctcatgcgt gacattgaggagaaccgcgacagcccagaaatcttggatcaaatttatcgcaataatcccatcctatgttatacagctgg gccaatttatgcacctcttctgcccttcccttatgcagctcagggtggccaaggttatgcagggcttcgtgatgaagctg tcaaactcttccattcactacaacagcttgaagaaatgcgagatccaatccttctcatgcagggggtgctgcaaacttgc catgaccttccagccctggtggatgaaatattctgccaactggtgaaacagacaacagagccacctattacaggggcacc cacagatttgcgctattggcagctgcttgtgtgcatgagctacacatttataccttctgtgcctatactctgctatttgc atctgcatctacagcggatggagaaattgttcccaagatcaccagtgacccactatggacatttaatcacacaagctctg cacaaaagcaaagggcgggagtgtgtgccctccttggatgagattgtagcactaataggaagccaggaaatcccacactc cacacattgtactggtactaccacctgttatgtggccatcacatctaatgctacagcccagaagggccttttgtgttagg gcattgtctattggattttggatcttctttggccaaacaataagtagagaagcaagaacatctacacagtggtaccctga aggccatttctctgatgtgggtcatcatctgttaaagaaatggagtatgggacagctgaaggcatggaagcctctctgaa tcagtctggaaagtgattagctctgctctttccaggttatcctcagttgtccaagagatggaaggtatttggaaggcagt tatatcctgggaggacactagtgtttatctgcctccaaagacctgttgctttcttttttcagatgaagacaattctgcag catcaacagacaagcatgttcagcttcaagaactcccagtaatcacacgaacagggaaatattccccaaaatgccagtgg tagaattttgagttgactcctatgtattctggcaggaatcttggatcagcatatattctggtcattgaaaggaataatag tgatattgttcgctcctaaggagctgataaactatgtcttctatatcagtggc |
|
| Transcript ID | habu1_s569_g02700.t4 |
| Definition | - |
>habu1_s569_g02700.t4 gctgctgtgctgcaggcaaggcttcaccttgctgcgacgcgactactgtgaggcaagcaagggggtggccggtgaagaag aagttgaagaaacctttgaattacgcaggcaaggcgatgaggactctatcttgcaagtgaacctcactcaacccagttgt gctagcagttgttccgaaagagctaatagttcccagctgggatcagggatagccaggcaggaagtaactatttgggtctt tgccagtgactgaagagacacacagtcttatcacagagaactgtggaaggatgcaatatgaacctgatgctattgtgaaa ggctggctgcagagagaggtccgaggaggtattaaaactccctggctgcgtcctcgcaaatactggtttgtgttgacaga agattccctagactactacagcgggtgtgaggtgagcgcccaacgccttggatcccttgttctcactagcctctgctctg tgctgtggcctgacaagcaaacctataaggaaacaggctactgggcagtgacagtttttggcagaaagcactgctaccga ctctatacagaacacttaaatgaagctgtacactgggtttgtgctttgcagaaggttatcatcagcaaggcccctttgca gacccccacacaactcctcatgcgtgacattgaggagaaccgcgacagcccagaaatcttggatcaaatttatcgcaata atcccatcctatgttatacagctgggccaatttatgcacctcttctgcccttcccttatgcagctcagggtggccaaggt tatgcagggcttcgtgatgaagctgtcaaactcttccattcactacaacagcttgaagaaatgcgagatccaatccttct catgcagggggtgctgcaaacttgccatgaccttccagccctggtggatgaaatattctgccaactggtgaaacagacaa cagagccacctattacaggggcacccacagatttgcgctattggcagctgcttgtgtgcatgagctacacatttatacct tctgtgcctatactctgctatttgcatctgcatctacagcggatggagaaattgttcccaagatcaccagtgacccacta tggacatttaatcacacaagctctgcacaaaagcaaagggcgggagtgtgtgccctccttggatgagattgtagcactaa taggaagccaggaaatcccacactccacacattgtactggtactaccacctgttatgtggccatcacatctaatgctaca gcccagaagggccttttgtgttagggcattgtctattggattttggatcttctttggccaaacaataagtagagaagcaa gaacatctacacagtggtaccctgaaggccatttctctgatgtgggtcatcatctgttaaagaaatggagtatgggacag ctgaaggcatggaagcctctctgaatcagtctggaaagtgattagctctgctctttccaggttatcctcagttgtccaag agatggaaggtatttggaaggcagttatatcctgggaggacactagtgtttatctgcctccaaagacctgttgctttctt ttttcagatgaagacaattctgcagcatcaacagacaagcatgttcagcttcaagaactcccagtaatcacacgaacagg gaaatattccccaaaatgccagtggtagaattttgagttgactcctatgtattctggcaggaatcttggatcagcatata ttctggtcattgaaaggaataatagtgatattgttcgctcctaaggagctgataaactatgtcttctatatcagtggc |
|
Protein
| Protein ID | habu1_s569_g02700.t1 |
|---|---|
| Definition | - |
>habu1_s569_g02700.t1 MPFPGGLWWLLCCRQGFTLLRRDYCEASKGVAGEEEVEETFELRRQGDEDSILQVNLTQPSCASSCSERSLPVTEETHSL ITENCGRMQYEPDAIVKGWLQREVRGGIKTPWLRPRKYWFVLTEDSLDYYSGCEVSAQRLGSLVLTSLCSVLWPDKQTYK ETGYWAVTVFGRKHCYRLYTEHLNEAVHWVCALQKVIISKAPLQTPTQLLMRDIEENRDSPEILDQIYRNNPILCYTAGP IYAPLLPFPYAAQGGQGYAGLRDEAVKLFHSLQQLEEMRDPILLMQGVLQTCHDLPALVDEIFCQLVKQTTEPPITGAPT DLRYWQLLVCMSYTFIPSVPILCYLHLHLQRMEKLFPRSPVTHYGHLITQALHKSKGRECVPSLDEIVALIGSQEIPHST HCTGTTTCYVAITSNATAQKGLLC |
|
| Protein ID | habu1_s569_g02700.t2 |
| Definition | - |
>habu1_s569_g02700.t2 MPFPGGLWWLLCCRQGFTLLRRDYCEASKGVAGEEEVEETFELRRQGDEDSILQVNLTQPSCASSCSERSLPVTEETHSL ITENCGRMQYEPDAIVKGWLQREVRGGIKTPWLRPRKYWFVLTEDSLDYYSGCEVSAQRLGSLVLTSLCSVLWPDKQTYK ETGYWAVTVFGRKHCYRLYTEHLNEAVHWVCALQKVIISKAPLQTPTQLLMRDIEENRDSPEILDQIYRNNPILCYTAGP IYAPLLPFPYAAQGGQGYAGLRDEAVKLFHSLQQLEEMRDPILLMQGVLQTCHDLPALVDEIFCQLVKQTTEPPITGAPT DLRYWQLLVCMSYTFIPSVPILCYLHLHLQRAFCVRALSIGFWIFFGQTISREARTSTQWYPEGHFSDVGHHLLKKWSMG QLKAWKPL |
|
| Protein ID | habu1_s569_g02700.t3 |
| Definition | - |
>habu1_s569_g02700.t3 MPFPGGLWWLLCCRQGFTLLRRDYCEASKGVAGEEEVEETFELRRQGDEDSILQVNLTQPSCASSCSERSLPVTEETHSL ITENCGRMQYEPDAIVKGWLQREVRGGIKTPWLRPRKYWFVLTEDSLDYYSGCEVSAQRLGSLVLTSLCSVLWPDKQTYK ETGYWAVTVFGRKHCYRLYTEHLNEAVHWVCALQKVIISKAPLQTPTQLLMRDIEENRDSPEILDQIYRNNPILCYTAGP IYAPLLPFPYAAQGGQGYAGLRDEAVKLFHSLQQLEEMRDPILLMQGVLQTCHDLPALVDEIFCQLVKQTTEPPITGAPT DLRYWQLLVCMSYTFIPSVPILCYLHLHLQRMEKLFPRSPVTHYGHLITQALHKSKGRECVPSLDEIVALIGSQEIPHST HCTGTTTCYVAITSNATAQKGLLC |
|
| Protein ID | habu1_s569_g02700.t4 |
| Definition | - |
>habu1_s569_g02700.t4 MQYEPDAIVKGWLQREVRGGIKTPWLRPRKYWFVLTEDSLDYYSGCEVSAQRLGSLVLTSLCSVLWPDKQTYKETGYWAV TVFGRKHCYRLYTEHLNEAVHWVCALQKVIISKAPLQTPTQLLMRDIEENRDSPEILDQIYRNNPILCYTAGPIYAPLLP FPYAAQGGQGYAGLRDEAVKLFHSLQQLEEMRDPILLMQGVLQTCHDLPALVDEIFCQLVKQTTEPPITGAPTDLRYWQL LVCMSYTFIPSVPILCYLHLHLQRMEKLFPRSPVTHYGHLITQALHKSKGRECVPSLDEIVALIGSQEIPHSTHCTGTTT CYVAITSNATAQKGLLC |
|