Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5709_g16188
Locus habu1_scaffold5709 : 151646 ... 186677 : +
To GenomeBrowser habu1_scaffold5709:151646..186677
Genes list of scaffold habu1_scaffold5709

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s5709_g16188.t1 gi|558146131|ref|XP_006119619.1| PREDICTED: calponin homology domain-containing protein DDB_G0272472-like [Pelodiscus sinensis] 2.0e-23
habu1_s5709_g16188.t1 gi|557269871|ref|XP_006020233.1| PREDICTED: uncharacterized protein PFB0765w-like [Alligator sinensis] 2.0e-17
habu1_s5709_g16188.t1 gi|641794933|ref|XP_008161054.1| PREDICTED: uncharacterized protein C10orf67 homolog isoform X4 [Chrysemys picta bellii] 5.0e-15
habu1_s5709_g16188.t1 gi|641794931|ref|XP_008161053.1| PREDICTED: uncharacterized protein C10orf67 homolog isoform X3 [Chrysemys picta bellii] 6.0e-15
habu1_s5709_g16188.t1 gi|641794935|ref|XP_008161056.1| PREDICTED: uncharacterized protein C10orf67 homolog isoform X5 [Chrysemys picta bellii] 6.0e-15

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 1.3
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 2.5
Small intestine 0.0
Large intestine 0.0
Stomach 0.2
heart 0.0
ovary 3.9
cheek muscle 0.0

Transcript
Transcript IDhabu1_s5709_g16188.t1
Definition-
>habu1_s5709_g16188.t1
tggggggccctgcattaggatataactatggtcatgggacaggactataaaaataatgggatgatgtttctttctaaaaa
attactttcttttgcttacctaaagctcttcttgccctcaaagaatgaaataaaacttttgcagaacaaaatggaaaaag
atatgaaggcaatggaaaagttaacaaatgctcacgaattactgaaggcagaacttgatagagagaaggagagagtgcaa
ggaaaagctcaggaactgaaagaagctcaagatgctcttgcaaaattaaaagaaactggagctcagccagtagcaaagaa
agcctcagaacaggaaggaaaagtgaaaaagggccggaaaaaaagcttgaaagggaaagctgtcaaagagacaaccagta
aagaggcagctcttaaaccagcaaccaccaaagaaacaaccaccaaagacacaactaccaaagacgcagccaccaaagac
tcagccaccaaaagagatgggataggtgaaactttggatgaggcaatggcaactgagagaaaagcattatataatgaaat
aaagaggcttaagaaagctgaagaacaagcaagattgcatgcacagagacttcagaaggaattaagtgaattgaataaat
cttgggtattaaagtttgatattctaaagaaaagcctgcatgctattaagaatgagatgtatcttagacaatcactgcag
caatcagtgaaattcagacgcccattactaactgaacggaaagctttgcctatacacatccagaatcgaattcagaatcc
tccacataaacgccgctggatttcaagtagtttgtatatgcagtattcacccctgccggagataactactgagatagaca
ttgagtcaggtgatgaagaacaaaattatgccaacaatccagttacaactgcagttcccaatgctttaatccaagatgaa
gaagggcttgaacaatcaaagttactgtcttcacctcttgtgtctactggacactgatgtgggttggagtcttctgccat
atctagaacaatggtctgcaccaaaaaggttgaatttattcagtttttctaaagaaggaactcaaaacaaattggccaga
tgagaagccattgctcctgacctgagagttgtttgagcattttctgcccaaatgtcacaatggtaaaagtgaatcaatat
atttaaggagcactgcttctaactgttaaggagctctggagtgtttttcctgcttcaaaaaataaaaaacaaaaagcttt
aaataaagaagcttagggccatatttctctgaattattattctgcaagccttaccattaaaatgcaataaaaattagttc
ctaaactgaactt

Protein
Protein IDhabu1_s5709_g16188.t1
Definition-
>habu1_s5709_g16188.t1
MEKDMKAMEKLTNAHELLKAELDREKERVQGKAQELKEAQDALAKLKETGAQPVAKKASEQEGKVKKGRKKSLKGKAVKE
TTSKEAALKPATTKETTTKDTTTKDAATKDSATKRDGIGETLDEAMATERKALYNEIKRLKKAEEQARLHAQRLQKELSE
LNKSWVLKFDILKKSLHAIKNEMYLRQSLQQSVKFRRPLLTERKALPIHIQNRIQNPPHKRRWISSSLYMQYSPLPEITT
EIDIESGDEEQNYANNPVTTAVPNALIQDEEGLEQSKLLSSPLVSTGH

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