Gene
| Gene Model ID | habu1_s5709_g16191 |
|---|---|
| Locus | habu1_scaffold5709 : 239356 ... 309505 : - |
| To GenomeBrowser | habu1_scaffold5709:239356..309505 |
| Genes list of scaffold | habu1_scaffold5709 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| armadillo repeat-containing protein 3 isoform x1 | GO:0006810 GO:0016020 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5709_g16191.t1 | 4 | 1 | HEAT_2 | 33 | 113 | 1.9e-30 | 104.9 | 4.0e-08 | 3.7e-05 | 23.9 |
| habu1_s5709_g16191.t1 | 6 | 1 | Arm | 57 | 92 | 0.0 | 162.3 | 6.3e-06 | 0.0058 | 16.4 |
| habu1_s5709_g16191.t1 | 1 | 1 | KAP | 93 | 280 | 4.3e-06 | 24.9 | 2.4e-07 | 0.00023 | 19.2 |
| habu1_s5709_g16191.t1 | 6 | 2 | Arm | 143 | 178 | 0.0 | 162.3 | 7.8e-10 | 7.2e-07 | 28.7 |
| habu1_s5709_g16191.t1 | 4 | 2 | HEAT_2 | 152 | 244 | 1.9e-30 | 104.9 | 1.0e-09 | 9.5e-07 | 29.0 |
| habu1_s5709_g16191.t1 | 3 | 1 | HEAT | 152 | 179 | 1.4e-26 | 90.1 | 3.3e-06 | 0.0031 | 17.4 |
| habu1_s5709_g16191.t1 | 1 | 1 | Adaptin_N | 154 | 387 | 3.4e-09 | 35.5 | 4.7e-09 | 4.4e-06 | 25.3 |
| habu1_s5709_g16191.t1 | 6 | 3 | Arm | 183 | 219 | 0.0 | 162.3 | 1.7e-07 | 0.00016 | 21.3 |
| habu1_s5709_g16191.t1 | 4 | 3 | HEAT_2 | 321 | 420 | 1.9e-30 | 104.9 | 9.7e-10 | 9.0e-07 | 29.0 |
| habu1_s5709_g16191.t1 | 6 | 4 | Arm | 357 | 384 | 0.0 | 162.3 | 1.7e-10 | 1.5e-07 | 30.9 |
| habu1_s5709_g16191.t1 | 3 | 2 | HEAT | 358 | 384 | 1.4e-26 | 90.1 | 2.3e-07 | 0.00021 | 21.1 |
| habu1_s5709_g16191.t1 | 6 | 5 | Arm | 390 | 426 | 0.0 | 162.3 | 8.2e-06 | 0.0076 | 16.0 |
| habu1_s5709_g16191.t1 | 4 | 4 | HEAT_2 | 443 | 511 | 1.9e-30 | 104.9 | 5.0e-08 | 4.6e-05 | 23.6 |
| habu1_s5709_g16191.t1 | 1 | 1 | HEAT_EZ | 455 | 503 | 8.4e-15 | 54.7 | 4.2e-06 | 0.0039 | 17.6 |
| habu1_s5709_g16191.t1 | 6 | 6 | Arm | 471 | 503 | 0.0 | 162.3 | 7.3e-12 | 6.8e-09 | 35.2 |
| habu1_s5709_g16191.t1 | 3 | 3 | HEAT | 482 | 508 | 1.4e-26 | 90.1 | 5.9e-06 | 0.0055 | 16.6 |
| habu1_s5709_g16191.t1 | 1 | 1 | EDR1 | 724 | 848 | 1.5e-26 | 93.2 | 1.8e-25 | 1.6e-22 | 80.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5709_g16191.t1 | gi|637309973|ref|XP_008110636.1| | PREDICTED: armadillo repeat-containing protein 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5709_g16191.t1 | gi|558146006|ref|XP_006119589.1| | PREDICTED: armadillo repeat-containing protein 3 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s5709_g16191.t1 | gi|591367373|ref|XP_007058536.1| | PREDICTED: armadillo repeat-containing protein 3 [Chelonia mydas] | 0.0 |
| habu1_s5709_g16191.t1 | gi|530626611|ref|XP_005302837.1| | PREDICTED: armadillo repeat-containing protein 3 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5709_g16191.t1 | gi|530626615|ref|XP_005302839.1| | PREDICTED: armadillo repeat-containing protein 3 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.9 |
| Pit, infrared sensing | 1.7 |
| Nose | 4.6 |
| Brain-1 | 0.9 |
| Eye | 1.9 |
| fetal fibroblast | 1.2 |
| venom gland-2 | 0.4 |
| Brain-2 | 1.2 |
| Spleen | 0.6 |
| Lung | 0.7 |
| Liver | 0.4 |
| Kidney | 0.5 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.3 |
| Stomach | 0.4 |
| heart | 1.3 |
| ovary | 3.6 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s5709_g16191.t1 |
|---|---|
| Definition | - |
>habu1_s5709_g16191.t1 cgagaccaatattgggaagacctggaaacgtgtgtatcggcctagaggactctcagatacagatcttcctgtgtcactga aactttctggggacggtctgaattgaaaagtcatctgaagaaaggaaagaccttcgaatgggtaaaaaggtaaaaaagga agttgagcctcctccaaaggatgtgtttgatcctttgtcagttgaaagcaaaaaagctgcaacagtggtactgatgctca attcccctgaagaggaagtgctatataaagcatgtgaagctctgtataaatttgcattaaaaggtgaagaaaataagctg acacttcttgaacttggagcattagaacctttatttaaattagttatacatgaagatcccactgttcgcagaaatgctac catggtagttggaatcatggcatctcataatgatgtgaagaaatcactacggcagcttgatgtcacaagtgcatttatag ctcgtctggcaccagaagaagaggttgtcatccatgagttcgctagcctttgtctcgtacatatgtcagttgattataat agtaaagtacaaatatttgagcaaggtggactagagcctcttatccgactgctaggaagtcctgatcctgatgttaagaa gaattgtgtggaatgcatctataatctagtgcaggattttcagagtcgtgctgcaatacgcgaattaaatgtaattcctc ctttgttggaacttctgaagtctgactacccagttattcagttgttagcactcaaaactttaggtgtcattaccattgac agagaaataagagtgatgctaagagaaaatcaaggattagatcatcttttcaagatactggaaactaaggaatttaatga cctacatgtagaagctcttggagttgtggcaaattgtcttgaggatgtggatactatgcaactgatccaggagacagggg gtctcagaaagctactggcctttactgaagtttccactctaactgattttcagaagaatgccgcaaaagctattgctaaa gcagccgctgatcctgaaaacagaaaaatcctgaatgaacaagaagttgaaaaatgtcttgtcactcttttgggaacgga taatgaaggaacaaaaatagctgcttctcaagccatctctgctatgtgtgagaatttagctagtaaacaaaccattggag ctctaggaattccccagctcattcagttgctaagcagcgaaaatgaagaggtaaaagaagctgctgctacagctctggtt aatctaacaactgcccatcttgccaatgtaagtgctgttgctgaagctgaagccatcgaaccgctaattagtgttctgag ctgcaaaagggatggcgctgtggctagtgctgcctctgttctcacaaacttagccatgcaggagcccttacgtctcacca tccaaagtcatggttttatgactgccattgtagaaccactgaattccactaacagcattgtgcagagcagagcagctctt gctgtggctgctatgggctgtgatgctgaggccagaactgagttacgaaattctggtggtcttgaacctcttgttaagct tctgcattctaagaatgatgaagtccgaagaaatgcttgttgggctgttatggtttgtgcaagtgatgagttaacagcag ctgaaatgaccaggctgggtgctttagatattcttgatgaaattaacctctctattggtcgcaaaaataacttcagtgaa gcagcattggaaaagatccttgatcacaatcttccacaaaaatacagtcaaatggggtttttagcatctactaacataat tttggatggattctatgactatgggcaggtgaaacctggtgaaaaactattgtcactggaggaactctgtgttcaggagc ttaatgatcatcgtgctataattttaataaatgctaaactatcagaacttgaacaacaagcaatttccataccagttgag gaaaagccacaagagaccacagcctctcgaattggggtgtctgccagcaatatcaggagatctagcagaaataattcatt ggatgaaaaaccagactcaccaggacggtcttcttcaatcagtaaaggaacctctagagagaaaggatcaaggaagggaa aagggaaaaaagaagaagaaaaaccaaaagatgaggacttggaagcatccatacctaaaatagttgaaaccccaggaaaa gctttatggatccccccttttgaccccatcttgtatgattatattagtgagatttccagaacaattctgccactaccaac cagcaaagagcaagtggtaactcttgcacagtttgttgcagataggttgggtggtcccattgaaagagacaatctacatg aattcagctgggagcttcatataagtgaaattgaatatgagcttaaatgcaatgtggtacctattgggaagatcaacaaa gggaccttctaccacagagctttgcttttcaaggttctggcagacagaattgctattaattgcagcctataccgtggtga atataatagagggtggaatgaggtgaaattggttgatgattctcctttgggaatacctggacttctgcttccccctcaaa tatatattgtggatctcatgtatcagccaggctatctcatgaaagaaggaagtccagaggcagatcgttatcgacggatt tgattattttttcttaaccttctctgtgtatgtatttatttacttactagcatttcagtttgtttattaaaatcttacat atagggcttattttcaaagttgggagtctagatgggacttttaaaatgtattcctagaggttgggagtttatttgtattt tacatttttaaaaagacatgttgaataaataaataaataaaattatacctg |
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Protein
| Protein ID | habu1_s5709_g16191.t1 |
|---|---|
| Definition | - |
>habu1_s5709_g16191.t1 MGKKVKKEVEPPPKDVFDPLSVESKKAATVVLMLNSPEEEVLYKACEALYKFALKGEENKLTLLELGALEPLFKLVIHED PTVRRNATMVVGIMASHNDVKKSLRQLDVTSAFIARLAPEEEVVIHEFASLCLVHMSVDYNSKVQIFEQGGLEPLIRLLG SPDPDVKKNCVECIYNLVQDFQSRAAIRELNVIPPLLELLKSDYPVIQLLALKTLGVITIDREIRVMLRENQGLDHLFKI LETKEFNDLHVEALGVVANCLEDVDTMQLIQETGGLRKLLAFTEVSTLTDFQKNAAKAIAKAAADPENRKILNEQEVEKC LVTLLGTDNEGTKIAASQAISAMCENLASKQTIGALGIPQLIQLLSSENEEVKEAAATALVNLTTAHLANVSAVAEAEAI EPLISVLSCKRDGAVASAASVLTNLAMQEPLRLTIQSHGFMTAIVEPLNSTNSIVQSRAALAVAAMGCDAEARTELRNSG GLEPLVKLLHSKNDEVRRNACWAVMVCASDELTAAEMTRLGALDILDEINLSIGRKNNFSEAALEKILDHNLPQKYSQMG FLASTNIILDGFYDYGQVKPGEKLLSLEELCVQELNDHRAIILINAKLSELEQQAISIPVEEKPQETTASRIGVSASNIR RSSRNNSLDEKPDSPGRSSSISKGTSREKGSRKGKGKKEEEKPKDEDLEASIPKIVETPGKALWIPPFDPILYDYISEIS RTILPLPTSKEQVVTLAQFVADRLGGPIERDNLHEFSWELHISEIEYELKCNVVPIGKINKGTFYHRALLFKVLADRIAI NCSLYRGEYNRGWNEVKLVDDSPLGIPGLLLPPQIYIVDLMYQPGYLMKEGSPEADRYRRI |
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