Gene
| Gene Model ID | habu1_s5810_g16304 |
|---|---|
| Locus | habu1_scaffold5810 : 94056 ... 109585 : - |
| To GenomeBrowser | habu1_scaffold5810:94056..109585 |
| Genes list of scaffold | habu1_scaffold5810 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| apoptosis-inducing factor 2 isoform x1 | EC:1.5.5.1 GO:0003677 GO:0004174 GO:0005615 GO:0005741 GO:0005811 GO:0005829 GO:0008637 GO:0050660 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5810_g16304.t1 | 1 | 1 | FAD_binding_3 | 11 | 49 | 8.9e-06 | 24.9 | 7.9e-07 | 0.00051 | 19.2 |
| habu1_s5810_g16304.t1 | 3 | 1 | Pyr_redox_2 | 12 | 148 | 1.9e-24 | 86.6 | 1.3e-14 | 8.6e-12 | 45.3 |
| habu1_s5810_g16304.t1 | 2 | 1 | Pyr_redox | 12 | 46 | 4.8e-16 | 58.9 | 3.9e-07 | 0.00025 | 21.3 |
| habu1_s5810_g16304.t1 | 1 | 1 | Pyr_redox_3 | 82 | 177 | 3.2e-08 | 33.8 | 5.5e-06 | 0.0036 | 17.4 |
| habu1_s5810_g16304.t1 | 1 | 1 | K_oxygenase | 94 | 178 | 1.0e-08 | 34.4 | 6.9e-10 | 4.4e-07 | 29.1 |
| habu1_s5810_g16304.t1 | 3 | 2 | Pyr_redox_2 | 143 | 244 | 1.9e-24 | 86.6 | 8.5e-10 | 5.5e-07 | 29.6 |
| habu1_s5810_g16304.t1 | 2 | 2 | Pyr_redox | 143 | 211 | 4.8e-16 | 58.9 | 2.9e-12 | 1.8e-09 | 37.8 |
| habu1_s5810_g16304.t1 | 1 | 1 | DAO | 191 | 247 | 1.6e-08 | 33.8 | 9.0e-06 | 0.0058 | 15.5 |
| habu1_s5810_g16304.t1 | 3 | 3 | Pyr_redox_2 | 259 | 289 | 1.9e-24 | 86.6 | 6.6e-07 | 0.00042 | 20.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5810_g16304.t1 | gi|602674789|ref|XP_007442882.1| | PREDICTED: apoptosis-inducing factor 2 [Python bivittatus] | 0.0 |
| habu1_s5810_g16304.t1 | gi|530575118|ref|XP_005281943.1| | PREDICTED: apoptosis-inducing factor 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5810_g16304.t1 | gi|530575120|ref|XP_005281944.1| | PREDICTED: apoptosis-inducing factor 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s5810_g16304.t1 | gi|327267462|ref|XP_003218521.1| | PREDICTED: apoptosis-inducing factor 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5810_g16304.t1 | gi|591359489|ref|XP_007054724.1| | PREDICTED: apoptosis-inducing factor 2 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 4.0 |
| Nose | 2.8 |
| Brain-1 | 1.8 |
| Eye | 2.6 |
| fetal fibroblast | 4.6 |
| venom gland-2 | 0.3 |
| Brain-2 | 1.9 |
| Spleen | 1.3 |
| Lung | 3.3 |
| Liver | 0.0 |
| Kidney | 2.8 |
| Pancreas | 0.2 |
| Small intestine | 0.7 |
| Large intestine | 1.4 |
| Stomach | 1.4 |
| heart | 11.1 |
| ovary | 27.9 |
| cheek muscle | 22.1 |
Transcript
| Transcript ID | habu1_s5810_g16304.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16304.t1 ggccctcaatgaaattgagtttgacacccctggtctattatgttttggaagacacgggcagtctgggaagaatagcctga aaactctccaggtgctgctgctgcgtgattcgggatgggatcgaagctctccgtggatgactctgtccgcgtcgtcatag ttggaggcggcttcggaggggtggaagctgcccgcctcctgcgggattgggggatccccttcgtcctcgtcgacatgaga gatgccttccaccacaatgtggctgctctgcgggcttccgtacagagcggatttgcaaaaaaaacctttatctccttctc tgagaccttcaaagagagtttccagcagggcaaagtagttgagatcgatttggagaaacatcaggtcctactgaacgatg ataaagtactttcattttctcatctgatcctcgccactgggagtgaagggccttttcctgggaagtttaatcaacttatt aatatggagatggctattcaggcttatgagaacatagtcaaggaggtggaaaaagctgagcgggtggttatcgtaggtgg cggttctgctggggttgaaatggctgcagaagttaagacaacatatcctaacaaagaggtcacacttattcattcaaaaa cggcactggcagatggcggactccttcccagagtcagggaggaagtgaaggagactcttacacaggagggagtgcatctc ttgttggatcagaaagtttctaatatccctatgctgaccttaaaccaattcaaggagaacatgatagtgaagactgagaa aggtactgaggttactgctgatctggtgattctgtgcactggaataaaaataaactcttcagcatatggcagtgcattca gagaccagctggcaaataatggtgctttgaaagtgaatgaatatcttcaagttgtgggctatgataatatctatgctatt ggtgactgctcagatgtgaaagaaccaaagatggcatatcatgctcaactccatgcaaacgttgtagtgaccaatattat caacagcctgactcaaaagcctctgaaaacctataaaccaggatcacttaccttcctgatttccctgggaagtaatgatg gagtgggacaaatcaatgaatactatgtagggcatctcttagtgactgtcctcaaaagtaaagatcttttcatctcaaaa agttggaagaagatgcatcagcagatgccatgctagaaatggaactgccataaacaaaaacagaactgatggtacctgta atgaattagtaatgcttagtttgctaacattaaatcataattgtctttaagaaact |
|
Protein
| Protein ID | habu1_s5810_g16304.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16304.t1 MGSKLSVDDSVRVVIVGGGFGGVEAARLLRDWGIPFVLVDMRDAFHHNVAALRASVQSGFAKKTFISFSETFKESFQQGK VVEIDLEKHQVLLNDDKVLSFSHLILATGSEGPFPGKFNQLINMEMAIQAYENIVKEVEKAERVVIVGGGSAGVEMAAEV KTTYPNKEVTLIHSKTALADGGLLPRVREEVKETLTQEGVHLLLDQKVSNIPMLTLNQFKENMIVKTEKGTEVTADLVIL CTGIKINSSAYGSAFRDQLANNGALKVNEYLQVVGYDNIYAIGDCSDVKEPKMAYHAQLHANVVVTNIINSLTQKPLKTY KPGSLTFLISLGSNDGVGQINEYYVGHLLVTVLKSKDLFISKSWKKMHQQMPC |
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