Gene
| Gene Model ID | habu1_s5810_g16305 |
|---|---|
| Locus | habu1_scaffold5810 : 129017 ... 144155 : - |
| To GenomeBrowser | habu1_scaffold5810:129017..144155 |
| Genes list of scaffold | habu1_scaffold5810 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| carbohydrate sulfotransferase 3 isoform x1 | EC:2.8.2.17 GO:0000139 GO:0005975 GO:0008459 GO:0030206 GO:0043029 GO:0050698 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5810_g16305.t1 | 1 | 1 | Sulfotransfer_1 | 138 | 456 | 0.0 | 169.0 | 0.0 | 0.0 | 168.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5810_g16305.t1 | gi|602663769|ref|XP_007437510.1| | PREDICTED: carbohydrate sulfotransferase 3-like [Python bivittatus] | 0.0 |
| habu1_s5810_g16305.t1 | gi|327267460|ref|XP_003218520.1| | PREDICTED: carbohydrate sulfotransferase 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5810_g16305.t1 | gi|557280378|ref|XP_006023188.1| | PREDICTED: carbohydrate sulfotransferase 3 isoform X2 [Alligator sinensis] | 0.0 |
| habu1_s5810_g16305.t1 | gi|564231546|ref|XP_006260167.1| | PREDICTED: carbohydrate sulfotransferase 3-like isoform X2 [Alligator mississippiensis] | 0.0 |
| habu1_s5810_g16305.t1 | gi|557280376|ref|XP_006023187.1| | PREDICTED: carbohydrate sulfotransferase 3 isoform X1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 1.7 |
| Eye | 0.3 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.8 |
| Spleen | 0.6 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 16.9 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s5810_g16305.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16305.t1 gtttggtttttattccccccctttgctgggtggttgcagcagttttggtcacttcacatgaccctgggacactgtgacca tcataaatatgaatcagttgccaagcacctgggccctggagatgctgcaacattccagctgattggtgcttcttcaggac ttagcagaagcaccgggatcagcaccgagctccagctggaacctgacgctgatcctggcacttccgtagcccttgtcgta attgagaaggagaacaacatcatctcaagggtttcagacaaactgaagcagtctccacagtccctgccagaagccaacag cactgattccggattgatgctgccagagaatggctccctcttgtcactgagctcactggacttggccttctcccagctta agcaccggttgcagaacctcactttgcagcttggtggcactctgctggcccccactaaaaggacacgaaaacatgttctc ctaatggccaccacccgtaccggctcttcctttgtaggggaattcttcaaccagcagggcaacattttctatctctttga gccactgtggcatatagaaaggacagtatcttttgaatccgggggtgctaatgcggtgggatcggcccttgtctacagag atgttttgaagcagctgttcctttgtgatctttacattttggaaaacttcatcatcccatttccagaggatcacctgact caatttttgtttcggcgtggttcgagtcgctctttgtgtgaggagcctgtttgcacccccttcgtcaggaaggtctttga gaagtaccactgcaagaaccgccgctgtggccccctgaatgtgactctggcagtggagtcctgcctgcagaaggagcaca tggcccttaaggctgtccgaattcgacaactcgaattcttgcgtccattagctgaagatccccgcctggacttgaggata attcagttggtgcgggatcctcgtgcggtgctggcctcccgcatggtggctttttcgggtaggtatgaaacctggaagaa atgggctaacgaaggtgtagcaactctgaatgaggatgaggtccagagattgcgaggcaactgtgaaaacatccgactct cagctgaactcggtttaaagcagccagcatggcttcaaggtcgctacatgctggttcgctatgaggacattgccaggtct cccctccagaaagccaaggagatgtataaattcactggcattgctctcactacgcaggtggaggactggatccggaaaaa tacacaagcccctcaagatagcaatggcatctactccacccagaaaaactcctctgaacaatttgagaagtggcgattca gcatccccttcaaacttgcccaggtggtacagaacgtctgcacaccagccatgaacctgtttggctacaagttggccaac agtgctgagactcttacaaacagatccatcagcttgctagacgagaggaggaccttctggatcacgtaaaaggttgcctt cattggcggattttttttttcaatcatagcattctgtgaattgagaaagagagaatgcaaaaatctatatattgaggaag gaacacatgggcaggaagtgttggggagaagccatctttggttgttttgcttccacttgtcttgaccattcaagagcttt tggctttatctgaaagcaagcatcacttgttggcatatttgacacttccaggtggattacaatgggaacacagacactgg cataaggaagcattctgaagctgacacagagtagaagattaaaccctgtttccctacctcatgtccacgtcctttctctt ggagatgttgtctctcaccttcaccaaacatccaaagagagtgaatgttttatatttaaaataaatttatcacttgaaag aaaaacatgggcttctcaacctgcagagaagctgtgagagaagcagaatgttgcactgatctcatctaaggcagccttaa ggaatctgtcaaccagatatttgggaagggaaggaaagaaacttatttagcacaactgacagcgagaaagctgactctcc atgagtagacagaacgtgttttgtacacattctccctaaactcctcagataaattgaggccttgtttaaattgaggaggt gttactggggaagagagatgcatggcatagaacagaggtggctctacctataagtgtaaggagactttgggctacacaca gttttatgcacttaatattgtttttatcttgccaactcactcagtgctttgagagatttaaagcaaaccagcaatgaaat attctaagagaaagagactggaacaatagtcatcctacatctgtggacatgaacttttccttgttgtgctttcttttttt aagtcttttgtctgcttttcttgcttatctctgaatcagttgcaccaaccttcatctgatgtctgggatactaaagtgaa gagaatgctactttctcatcctatgaaagaaagttgtggctttaattgtatttttctccttcattcctataattatttct gtcctttaaagtgatgttggaaattggcagtacttcccttctgtaatttctgggggaatggtttcttccaggccacattt gttgaagcagaaagaggaaggtggacttggtcaagaggaaggcaacaaaaatgacagaaacagaaacaggctctctggtt gccaatctaaaattcctctgactaatttttgtttaagggttttggttgttatattcgttatcttgtttccagtgctggat ccagcagcaaacatctaatgaattttacttagctgttcatcagaagcacttaacatggtagaaggtataacctgactgtg aatttgatatttcatcccacagtggaaaccatatcaggattctgattggaaaaaaaaaggactcacttgggggcaattca atctcgttttctctgcacctgggtggagtccaacccacccccttccaaattcccaggaattttgttggaatggtaacatt ttcaacacattcaattttgggaaaagttgacatggattatcatgcctcactttgagttaataaattgatagattaatatc agggac |
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Protein
| Protein ID | habu1_s5810_g16305.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16305.t1 MTLGHCDHHKYESVAKHLGPGDAATFQLIGASSGLSRSTGISTELQLEPDADPGTSVALVVIEKENNIISRVSDKLKQSP QSLPEANSTDSGLMLPENGSLLSLSSLDLAFSQLKHRLQNLTLQLGGTLLAPTKRTRKHVLLMATTRTGSSFVGEFFNQQ GNIFYLFEPLWHIERTVSFESGGANAVGSALVYRDVLKQLFLCDLYILENFIIPFPEDHLTQFLFRRGSSRSLCEEPVCT PFVRKVFEKYHCKNRRCGPLNVTLAVESCLQKEHMALKAVRIRQLEFLRPLAEDPRLDLRIIQLVRDPRAVLASRMVAFS GRYETWKKWANEGVATLNEDEVQRLRGNCENIRLSAELGLKQPAWLQGRYMLVRYEDIARSPLQKAKEMYKFTGIALTTQ VEDWIRKNTQAPQDSNGIYSTQKNSSEQFEKWRFSIPFKLAQVVQNVCTPAMNLFGYKLANSAETLTNRSISLLDERRTF WIT |
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