Gene
| Gene Model ID | habu1_s5810_g16307 |
|---|---|
| Locus | habu1_scaffold5810 : 234576 ... 309394 : + |
| To GenomeBrowser | habu1_scaffold5810:234576..309394 |
| Genes list of scaffold | habu1_scaffold5810 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proactivator polypeptide-like | GO:0005764 GO:0006665 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5810_g16307.t1 | 3 | 1 | SapA | 26 | 57 | 2.7e-34 | 116.6 | 8.9e-19 | 3.3e-15 | 55.5 |
| habu1_s5810_g16307.t1 | 6 | 1 | SapB_1 | 64 | 101 | 0.0 | 174.6 | 2.7e-12 | 9.9e-09 | 34.8 |
| habu1_s5810_g16307.t1 | 5 | 1 | SapB_2 | 107 | 141 | 8.6e-30 | 102.3 | 5.6e-12 | 2.1e-08 | 34.0 |
| habu1_s5810_g16307.t1 | 6 | 2 | SapB_1 | 197 | 235 | 0.0 | 174.6 | 2.1e-08 | 7.9e-05 | 22.3 |
| habu1_s5810_g16307.t1 | 5 | 2 | SapB_2 | 239 | 261 | 8.6e-30 | 102.3 | 1.9e-07 | 0.0007 | 19.5 |
| habu1_s5810_g16307.t1 | 6 | 3 | SapB_1 | 276 | 313 | 0.0 | 174.6 | 3.3e-14 | 1.2e-10 | 40.9 |
| habu1_s5810_g16307.t1 | 3 | 2 | SapA | 430 | 458 | 2.7e-34 | 116.6 | 1.5e-07 | 0.00055 | 19.6 |
| habu1_s5810_g16307.t1 | 6 | 4 | SapB_1 | 469 | 505 | 0.0 | 174.6 | 1.1e-09 | 4.2e-06 | 26.4 |
| habu1_s5810_g16307.t1 | 5 | 3 | SapB_2 | 646 | 682 | 8.6e-30 | 102.3 | 9.7e-10 | 3.6e-06 | 26.8 |
| habu1_s5810_g16307.t1 | 6 | 5 | SapB_1 | 719 | 755 | 0.0 | 174.6 | 3.8e-14 | 1.4e-10 | 40.7 |
| habu1_s5810_g16307.t1 | 5 | 4 | SapB_2 | 760 | 793 | 8.6e-30 | 102.3 | 4.7e-06 | 0.017 | 15.1 |
| habu1_s5810_g16307.t1 | 6 | 6 | SapB_1 | 827 | 864 | 0.0 | 174.6 | 6.8e-11 | 2.5e-07 | 30.3 |
| habu1_s5810_g16307.t1 | 5 | 5 | SapB_2 | 871 | 902 | 8.6e-30 | 102.3 | 1.8e-10 | 6.7e-07 | 29.2 |
| habu1_s5810_g16307.t1 | 3 | 3 | SapA | 910 | 942 | 2.7e-34 | 116.6 | 9.9e-18 | 3.7e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5810_g16307.t1 | gi|602671695|ref|XP_007441358.1| | PREDICTED: proactivator polypeptide-like [Python bivittatus] | 0.0 |
| habu1_s5810_g16307.t1 | gi|327267456|ref|XP_003218518.1| | PREDICTED: proactivator polypeptide-like [Anolis carolinensis] | 0.0 |
| habu1_s5810_g16307.t1 | gi|530575097|ref|XP_005281933.1| | PREDICTED: proactivator polypeptide-like [Chrysemys picta bellii] | 0.0 |
| habu1_s5810_g16307.t1 | gi|591359535|ref|XP_007054747.1| | PREDICTED: proactivator polypeptide-like [Chelonia mydas] | 0.0 |
| habu1_s5810_g16307.t1 | gi|558155046|ref|XP_006121559.1| | PREDICTED: proactivator polypeptide-like isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 43.7 |
| Venom grand-1 | 10.7 |
| Pit, infrared sensing | 45.2 |
| Nose | 32.2 |
| Brain-1 | 50.9 |
| Eye | 26.5 |
| fetal fibroblast | 81.6 |
| venom gland-2 | 19.9 |
| Brain-2 | 62.6 |
| Spleen | 25.5 |
| Lung | 29.1 |
| Liver | 31.5 |
| Kidney | 39.3 |
| Pancreas | 12.5 |
| Small intestine | 18.8 |
| Large intestine | 29.3 |
| Stomach | 25.4 |
| heart | 11.9 |
| ovary | 44.4 |
| cheek muscle | 23.3 |
Transcript
| Transcript ID | habu1_s5810_g16307.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16307.t1 caggcggcggaacttctgacaagagacgctcacaatgcggcgcttcgctttcctcctcttcctctgttctctggcagcgg ttgctttgacaactcccctgcttttgaagagagactgtgcaaaaggtccagaggtatggtgccagaatttgcgaactgca tctgattgcaaagcagttaaacattgtcagcaaaatgtgtggaacaagcctactatggagagtattccctgtgacttgtg caaagaaattatacgagtggttggaaagctcttaaagaacaatgatacaatggaagaaatagatgaatatttcaacaaaa tgtgtgaatttcttcctgaatcagacctgatagaacagtgtaaggacatagtggattcttatttgccaaatattctggat atggtcagatcagaacttgaagatcctgaagttgtatgcagtgcactcacactatgtcagtctcttcagaagcacctggg aaaagtaaaattacaaaaccagcttcagtccaacaaaattccggaactagatttctctgaactggcatctccattcatgg ctaatgtgccacttcttctttatcctcaggataaacctaagaaagaaacacagggaagtggaaatgtgtgtaatgactgt attcagctgataacggatgttcaggacgctgtgagaaacaattcaacttttgttagttctttaattgaacatgccaagga agagtgtgaacgtttgggtcctgccctgtctgaaatgtgtaaaggctacatttctgagtattcctccctggctattcaga tgatcatgcacatgcaagagcaggtataagaaattgttccagtgcaatcagaattgggaaatatctgtgatgtgtgcaag atgattgttgcttatgcagacaaggaactagaaaagaatgctaccactgctgagattgaaatgtttctggaacgagtctg ccactacttaccagagtctgttagcgaccagcagccgcacgaaaaagtgctgctgagttttgtccaaaccagtcccttag attttgaagccacaatgttcttcttctgcctggacctcatttgccttcgatctttccctggagcagtggttctcaacctt tttaatgccgcgaccccaaccggtcataagtcgaggactaaaccggtcgtaagtcgaggactaaaccggtcaggagaggc aggcatcatcaccgaagagttggttgacaccaggaccatggaaggctcatggaagagttgggtattgctggtggtgttct ctctggctttctatcaagctgctggaactcctgtgacatcacagaacgaatgtaccgaggatccatcaatattgtgtcag gattttgctacagctctgaagtgtggaagtttggagcgctgctatcagatgctgcaagttaataaccctaaaaatttaaa atgcactctttgtaaactcattgtagtcatgatggcaaagattgttcaagacaatactacagatgaaagacttgctaagt tttttgagagtggatgccagtatcttcccttccaggactggtcaatcaaatgcaagaagatggtggacactggagtgatc gttattatagagcttggtaaacaagttcaggatagacctgaaattgtgtgttgtgcttttctactctgcaatcagccaca gagtcctgacagagcactgaagtttcagaaccaactaaaatcagaagaatggcctgaaataacagagcttcgtgacatgc tgtctcctttcatagctaatgtgcctcttctcttcagtcaagataaaccccaaacagagccttggttctggcagagtaat gtagatctctgtcatgaatgcaagatggtggctatagaaatacacgaaatcttgaagaacagccccttccttatccagac tttggaggattatgccaagcagcagtgtgaaggtttggggacccacatggcagatgagtgcaagaaatatgtccctgaat acgcacatgcttttgtgcaattcctcatgtctctcttggatacgccaccaatgggaatttgcggtaaaattggattctgt gacactacaaaatcagagccttttcatcctttgaaggcaatggactacttttcagacctgtatggagcagtagttaagac aatttcagatgcagataaacctcatttgatgtgtgatatgtgcaagaaagtcgtacaggtggcagagaacttggtggaga acaataacacagaagagcaaatagtccatcagatggagaatgtttgttacatgttgcctcatgaagttgttcctcagtgc agggactttgtgaattcttatggaatggcagttctcattatgctgttggaggctactaaacctgaatccgtgtgcattat gctcaaatgttgcccagaagatgtatctttaagcaccaagaaagtagctcttgagaaaatagctcctgaaaagaaagtag cttttgagaaagtatcagaagacaaggataatgaaatatgtcgcatgtgtataattcttgttaattatattgataatgaa ctggagaagaatgaaacacaagcccagattggatctttccttactaaaggatgccaactactccccgatgctttggtata tacatgtgatcaactggtggaccaatatgaaccagctgctgtccatctcctgatacaagtcatgcaagcatcctttgtat gtgtgaaaataggaatttgtcctgaaccccatcttgtgggaatggaggcctgttcccggggccctactttctggtgcaag aatctcgagactgcagagcagtgccaggccactgaatactgcaaacaccacatatggaactagaggaggaggtcccagca gtggaagaacattggctgtgatgtttgttgaatatatctggaaacttgatttgggtgaaaaaaaatgtgaaaaatctaaa tcttggcaaaagcccatcttcctttcccaccttaagctcccggtatcaaaggaggccactgtttcatttgctgatcaagt tctgaatcacttttttactttgagctatggtgagaaaggaatataattgagaagaagagggtggaaggattaagaatttc ttgggattgtgttcataatagcaataaccaattttaggaagataaaacaactatatacagtggtcaaaataaccagaaca ggtaatttacgctgggatttttaaataaataggaatgttgaattttgaaga |
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Protein
| Protein ID | habu1_s5810_g16307.t1 |
|---|---|
| Definition | - |
>habu1_s5810_g16307.t1 MRRFAFLLFLCSLAAVALTTPLLLKRDCAKGPEVWCQNLRTASDCKAVKHCQQNVWNKPTMESIPCDLCKEIIRVVGKLL KNNDTMEEIDEYFNKMCEFLPESDLIEQCKDIVDSYLPNILDMVRSELEDPEVVCSALTLCQSLQKHLGKVKLQNQLQSN KIPELDFSELASPFMANVPLLLYPQDKPKKETQGSGNVCNDCIQLITDVQDAVRNNSTFVSSLIEHAKEECERLGPALSE MCKGYISEYSSLAIQMIMHMQEQVXEIVPVQSELGNICDVCKMIVAYADKELEKNATTAEIEMFLERVCHYLPESVSDQQ PHEKVLLSFVQTSPLDFEATMFFFCLDLICLRSFPGAVVLNLFNAATPTGHKSRTKPVVSRGLNRSGEAGIITEELVDTR TMEGSWKSWVLLVVFSLAFYQAAGTPVTSQNECTEDPSILCQDFATALKCGSLERCYQMLQVNNPKNLKCTLCKLIVVMM AKIVQDNTTDERLAKFFESGCQYLPFQDWSIKCKKMVDTGVIVIIELGKQVQDRPEIVCCAFLLCNQPQSPDRALKFQNQ LKSEEWPEITELRDMLSPFIANVPLLFSQDKPQTEPWFWQSNVDLCHECKMVAIEIHEILKNSPFLIQTLEDYAKQQCEG LGTHMADECKKYVPEYAHAFVQFLMSLLDTPPMGICGKIGFCDTTKSEPFHPLKAMDYFSDLYGAVVKTISDADKPHLMC DMCKKVVQVAENLVENNNTEEQIVHQMENVCYMLPHEVVPQCRDFVNSYGMAVLIMLLEATKPESVCIMLKCCPEDVSLS TKKVALEKIAPEKKVAFEKVSEDKDNEICRMCIILVNYIDNELEKNETQAQIGSFLTKGCQLLPDALVYTCDQLVDQYEP AAVHLLIQVMQASFVCVKIGICPEPHLVGMEACSRGPTFWCKNLETAEQCQATEYCKHHIWN |
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