Gene
| Gene Model ID | habu1_s581_g02727 |
|---|---|
| Locus | habu1_scaffold581 : 1 ... 58650 : + |
| To GenomeBrowser | habu1_scaffold581:1..58650 |
| Genes list of scaffold | habu1_scaffold581 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rna polymerase ii elongation factor ell2 | GO:0003746 GO:0005813 GO:0005840 GO:0006368 GO:0006448 GO:0008023 GO:0042795 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s581_g02727.t2 | 1 | 1 | ELL | 1 | 130 | 3.29305e-43 | 147.9 | 0.0 | 3.29305e-43 | 147.9 |
| habu1_s581_g02727.t2 | 1 | 1 | Occludin_ELL | 375 | 475 | 4.0e-32 | 110.9 | 1.1e-35 | 4.0e-32 | 110.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.8 |
| Venom grand-1 | 25.4 |
| Pit, infrared sensing | 19.9 |
| Nose | 11.7 |
| Brain-1 | 5.9 |
| Eye | 13.3 |
| fetal fibroblast | 13.9 |
| venom gland-2 | 110.3 |
| Brain-2 | 6.0 |
| Spleen | 11.8 |
| Lung | 18.4 |
| Liver | 22.9 |
| Kidney | 19.0 |
| Pancreas | 18.8 |
| Small intestine | 11.7 |
| Large intestine | 13.1 |
| Stomach | 12.4 |
| heart | 11.9 |
| ovary | 18.7 |
| cheek muscle | 17.2 |
Transcript
| Transcript ID | habu1_s581_g02727.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02727.t1 gtaaaagagtacaaattcgaaaagcaccacaaagtattccagatgcagttcctgaaaggaaaaggtctacccccatcaac cctgcaagtacaatacgaaagacccatacaaacaacagtatttcacagcggccttataaggatagaataattcacttatt ggcactgaagacttacaagaaaccagaacttcttgcccgcttattaaaagatggtgttagtcaaaaagataggaattccc ttgctgctattcttcagcaggtagccaatctgaatccaaaggacaactcttacactttgaaagaatatatttataaggaa gttcaaaaagattggcctggatataatgaaatagatagacagtcactggaattaatactttctcgaaaactacattcatc tcagaatgccaccagcaccagtaacttgggatctcctttgagtactgtcaaagaggttgcatctgcttccccgtctcaga aacggcttttggattctgactttattgatccgttaatgaataaaaaaccaaggatatctcatcttaccaatagagttcaa ccaacattaagtagccatttgcctacttctggtgaaaaaaatgctgaaacttctcaaccaccaccacctcctgcagttgc tgcagcaccagctgctccaccatttgtttcaacttgtctccctgtttcaaatcctccccagactgcaagttctaactcca attccccaagcactcccgaaggtcggggtacccaggacctgcctgttgacaccttaagccagaatggcaatatttatgag gaccagcatcaaaaatacacttccaggactccactggaaatcccagcgccttctgaaaatctgtcagtgtgcccaaagtc tacagatgaaaaacattcattactctacaaaaagtccaaaaagaaatcaaagaagcataaggagaaggaccaaataaaag accgtaacactgggaaggaagatgagaaaatgagagactgtgaaagccaagaaattaccaaattgaagaattccagtcag aaaatgagtgaaggtgttaaagagacacgcactgccactacagaaactctgtcaacaagtgaactaccagacttctttgt caaatacatagcaattgtctcatatgagcaacgtcaaagttacaaggatgattttaatgcagaatatgatgagtacagaa ccctgcatgcaaggatggagagtgtaactaggagatttatgaaactagatgcacagcgtaaactactctctccaggaact aaggaatatcagatccttcatgaggaagtcttacaagaatatcggaagattaaacagtctagtcccaactaccatgaaga aaagtacagatgtgaatatcttcataacaagttggctcatatcaaaagacgtatagcgttctttgacattctcctctttt ttgtatatgtcttgtatggtatggaatcccatggcattctctccagacatctcatttccgtggtgactcactttcattta tgttttattcctgggcacttggaatatattgatctcacaagccaaaataatatggatgccattcaagactatcttatgca gttaacaggtgcccgaacggttcctcgaatttttattggaaaatcatgtattggtggttttacagatctagatgctctaa acgatagtggagaactttccaccatgttaaagaagattggggcactgtgaagagcaacaataactacaggatggaattac cctgaagctgcacctacagcatttaggattagattagttgcctgttccatcttgtcttcatccattgtatatttctgaaa ggcggcaatacaaaaaaaagtgttggttactctctggcttctaagacacagctttaccctacttttatacctgttagtat gacagtttctctgctaataaagtactcatgaccacaatggatc |
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| Transcript ID | habu1_s581_g02727.t2 |
| Definition | - |
>habu1_s581_g02727.t2 gtaaaagagtacaaattcgaaaagcaccacaaagtattccagatgcagttcctgaaaggaaaaggtctacccccatcaac cctgcaagtacaatacgaaagacccatacaaacaacagtatttcacagcggccttataaggatagaataattcacttatt ggcactgaagacttacaagaaaccagaacttcttgcccgcttattaaaagatggtgttagtcaaaaagataggaattccc ttgctgctattcttcagcaggtagccaatctgaatccaaaggacaactcttacactttgaaagaatatatttataaggaa gttcaaaaagattggcctggatataatgaaatagatagacagtcactggaattaatactttctcgaaaactacattcatc tcagaatgccaccagcaccagtaacttgggatctcctttgagtactgtcaaagaggttgcatctgcttccccgtctcaga aacggcttttggattctgactttattgatccgttaatgaataaaaaaccaaggatatctcatcttaccaatagagttcaa ccaacattaagtagccatttgcctacttctggtgaaaaaaatgctgaaacttctcaaccaccaccacctcctgcagttgc tgcagcaccagctgctccaccatttgtttcaacttgtctccctgtttcaaatcctccccagactgcaagttctaactcca attccccaagcactcccgaaggtcggggtacccaggacctgcctgttgacaccttaagccagaatggcaatatttatgag gaccagcatcaaaaatacacttccaggactccactggaaatcccagcgccttctgaaaatctgtcagtgtgcccaaagtc tacagatgaaaaacattcattactctacaaaaagtccaaaaagaaatcaaagaagcataaggagaaggaccaaataaaag accgtaacactgggaaggaagatgagaaaatgagagactgtgaaagccaagaaattaccaaattgaagaattccagtcag aaaatgagtgaaggtgttaaagagacacgcactgccactacagaaactctgtcaacaagtgaactaccagacttctttgt caaatacatagcaattgtctcatatgagcaacgtcaaagttacaaggatgattttaatgcagaatatgatgagtacagaa ccctgcatgcaaggatggagagtgtaactaggagatttatgaaactagatgcacagcgtaaactactctctccaggaact aaggaatatcagatccttcatgaggaagtcttacaagaatatcggaagattaaacagtctagtcccaactaccatgaaga aaagtacagatgtgaatatcttcataacaagttggctcatatcaaaagacgtatagcgttctttgacattctcctctttt ttgtatatgtcttgtatggtatggaatcccatggcattctctccagacatctcatttccgtggtgactcactttcattta tgttttattcctgggcacttggaatatattgatctcacaagccaaaataatatggatgccattcaagactatcttatgca gttaacaggtgcccgaacggttcctcgaatttttattggaaaatcatgtattggtggttttacagatctagatgctctaa acgatagtggagaactttccaccatgttaaagaagattggggcactgtgaagaagccatgtttgatgtcatgacatcact gaactggcaaaggttgaccttttcagtttcttctgtctctctttctctctcttcattttggagaggtttggatgttaagc tggcaacacaggagctctaagtcttgcagagactgaggcatctattttgtctcctaaatcactacagcaattagaagtgt ttgcctaattcatagtgagattcactattttaagctgggcagtgaaagtcctaagcctttaaaatattaaatatggttga aatatttgcaatt |
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Protein
| Protein ID | habu1_s581_g02727.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02727.t1 KRVQIRKAPQSIPDAVPERKRSTPINPASTIRKTHTNNSISQRPYKDRIIHLLALKTYKKPELLARLLKDGVSQKDRNSL AAILQQVANLNPKDNSYTLKEYIYKEVQKDWPGYNEIDRQSLELILSRKLHSSQNATSTSNLGSPLSTVKEVASASPSQK RLLDSDFIDPLMNKKPRISHLTNRVQPTLSSHLPTSGEKNAETSQPPPPPAVAAAPAAPPFVSTCLPVSNPPQTASSNSN SPSTPEGRGTQDLPVDTLSQNGNIYEDQHQKYTSRTPLEIPAPSENLSVCPKSTDEKHSLLYKKSKKKSKKHKEKDQIKD RNTGKEDEKMRDCESQEITKLKNSSQKMSEGVKETRTATTETLSTSELPDFFVKYIAIVSYEQRQSYKDDFNAEYDEYRT LHARMESVTRRFMKLDAQRKLLSPGTKEYQILHEEVLQEYRKIKQSSPNYHEEKYRCEYLHNKLAHIKRRIAFFDILLFF VYVLYGMESHGILSRHLISVVTHFHLCFIPGHLEYIDLTSQNNMDAIQDYLMQLTGARTVPRIFIGKSCIGGFTDLDALN DSGELSTMLKKIGAL |
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| Protein ID | habu1_s581_g02727.t2 |
| Definition | - |
>habu1_s581_g02727.t2 KRVQIRKAPQSIPDAVPERKRSTPINPASTIRKTHTNNSISQRPYKDRIIHLLALKTYKKPELLARLLKDGVSQKDRNSL AAILQQVANLNPKDNSYTLKEYIYKEVQKDWPGYNEIDRQSLELILSRKLHSSQNATSTSNLGSPLSTVKEVASASPSQK RLLDSDFIDPLMNKKPRISHLTNRVQPTLSSHLPTSGEKNAETSQPPPPPAVAAAPAAPPFVSTCLPVSNPPQTASSNSN SPSTPEGRGTQDLPVDTLSQNGNIYEDQHQKYTSRTPLEIPAPSENLSVCPKSTDEKHSLLYKKSKKKSKKHKEKDQIKD RNTGKEDEKMRDCESQEITKLKNSSQKMSEGVKETRTATTETLSTSELPDFFVKYIAIVSYEQRQSYKDDFNAEYDEYRT LHARMESVTRRFMKLDAQRKLLSPGTKEYQILHEEVLQEYRKIKQSSPNYHEEKYRCEYLHNKLAHIKRRIAFFDILLFF VYVLYGMESHGILSRHLISVVTHFHLCFIPGHLEYIDLTSQNNMDAIQDYLMQLTGARTVPRIFIGKSCIGGFTDLDALN DSGELSTMLKKIGAL |
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