Gene
| Gene Model ID | habu1_s581_g02728 |
|---|---|
| Locus | habu1_scaffold581 : 67521 ... 102755 : - |
| To GenomeBrowser | habu1_scaffold581:67521..102755 |
| Genes list of scaffold | habu1_scaffold581 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho-related btb domain-containing protein 3 | EC:3.6.1.3 GO:0005524 GO:0005525 GO:0005737 GO:0007264 GO:0008152 GO:0016887 GO:0017137 GO:0042147 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s581_g02728.t1 | 2 | 1 | BTB | 277 | 394 | 4.4e-26 | 91.0 | 1.5e-09 | 7.3e-06 | 25.9 |
| habu1_s581_g02728.t1 | 2 | 2 | BTB | 441 | 544 | 4.4e-26 | 91.0 | 2.7e-21 | 1.3e-17 | 63.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s581_g02728.t1 | gi|602649161|ref|XP_007430991.1| | PREDICTED: rho-related BTB domain-containing protein 3 [Python bivittatus] | 0.0 |
| habu1_s581_g02728.t1 | gi|637260374|ref|XP_008101272.1| | PREDICTED: rho-related BTB domain-containing protein 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s581_g02728.t1 | gi|591358250|ref|XP_007054141.1| | PREDICTED: rho-related BTB domain-containing protein 3 [Chelonia mydas] | 0.0 |
| habu1_s581_g02728.t1 | gi|557268852|ref|XP_006019765.1| | PREDICTED: rho-related BTB domain-containing protein 3 [Alligator sinensis] | 0.0 |
| habu1_s581_g02728.t1 | gi|564245151|ref|XP_006261701.1| | PREDICTED: rho-related BTB domain-containing protein 3 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.0 |
| Nose | 1.0 |
| Brain-1 | 4.6 |
| Eye | 1.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 6.8 |
| Spleen | 0.9 |
| Lung | 1.0 |
| Liver | 0.2 |
| Kidney | 1.9 |
| Pancreas | 2.5 |
| Small intestine | 2.1 |
| Large intestine | 1.6 |
| Stomach | 0.4 |
| heart | 0.3 |
| ovary | 0.2 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s581_g02728.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02728.t1 cgcttctgaggggacagcgcgggtgccgagcgagggcgcgatggttgccctgctcgcataccgctgctttttgtggagtt ccaaggaaatttgctttcgtgcttctggatttaaaatcatgtctgttcacattgtagcctttgggaatgaaagagatgga ttttccgaggatgatcagcagaagagtttgatctggacttatcttgggagaagtgctttagtttcagagactgacagtaa tttgttattaaactctgccagttaccttagaaatcctgcattcaccgagtaccaagcttgtgtgtttggaaatgtcagat tggtgatacatgactgtcctctctgggatatttttgaaagtgactggtacacatctcggaacctcattggagaagcagat atcattgtgattaaatattctgtaaatgacaagacttcatttcaagaagtaaaagatatttatgcaccactgataaagaa aacacttagtcactgttcagttccagttataatttctgctgttggtgcaagacaaaacgaagtcccctgcacttgtcctt tgtgtatctcagacagaggtagctgtgtaacagcttctgaaggaattcagcttgctaaagaattaggagccacttatttg gaactgcatagcctcaatgatttttacataggaaaatattttggtggggtgctggaatattttatgatacaaagcttgaa tcagaaatcatctgaaaaaatgaagaaaaggaagaaaagccataaatgtcatggagttaagccacctcagcttgatcagc cagaaaaaatgcctatcttaaaaggcgaaacttcacattatgactctgatttacataacttgttgttctgctgccagtgt gttgatgtgatattttactctgaagacttgaaggaggtagcaaaagcacacaggattgttttatgctctattagccatgt cttcatgttgctttttaatgtgaagaacccaactgacattcaggattcttctatcattagaactgctcagtctctctttg cagccactcaggaaactctgtttcccatattaaaacatggcacatcatgtggttcaccagtaagagtcattgttaaggac tcattcttctgctcttgtttgacagatattctgcacttcatttattcaggtgctttccaatgggacctattggaagagca cattaaaaagaaactgaagaatcctggaaatgttgagcttgttcttgacagagtaaaatgtatcttgaaaattccaggaa aggttaacagttcccaaaattatagaacttatttgtcaaaaagaccgctacatttatgtaacagctctctcagacttttc tttaacacaacgatgttagctgatgtcatgttcaaaatacaaggtgctacagtaccagctcacaaagcagtcctagtggc tcgctgtgaagtaatggctgctatgtttagtggcaactatattgaatcaaatagtttcttggttccagtttatggaattt ccaaagatacatttctatcttttttagagtacctatacacagactcctgttgtccagccagcattctgcaagccatgtca cttttaatatgtgctgagatgtaccaggtttcaaggctccagcacatctgtgaactttatataattacacaacttcagag catgcctagtagagaattaacatctacaagtctgagtgttgtcagcttgcttcagaaagcaaagtttcataactcggatt gtctttcaaattggctgcttcattttattgcttctaattacttaatcttcagtcagaaacctgagtttgaagatctttca gtggaagaacgcaatttcatagagatgcacagatggccttctagtatgtacctgagacagcttgcagaatacaggaacta cattcattctcggaaatgtcattgtctaataatgtaaaaaaggatctttatttatgaatgattgaaagctgtgcttcaga aatcttaaaaatgaaatttgatatttagcttaaatgttgcacttgctaatgaataactactgtactgtttaaaagcatgt gaaacatattgtaacatatgcatttactaagatgaatttcagttgtattgttaggtctgattctatactttcaagttttt tagaagaatatgtactaatttgaaatatttgttagcctattatgtatctaggattccaggagcttgagggagaaattctg catccattagtcattttttttagctatttcttttgaatattttagtaagttatttatgagcttttagaaattttatattt tgtaaaaacacagagcttgtaaaaagaacattctattttggaattaaaaatgtacctcctcccaatctgcatcaaatttc tagaaaaaaaaatctcagaaaattatttaactttccccctcactgaggaatctagtatagtgaaagagtccagtatggtt tttctacatactgtaaaacaaaattaggtatgaaaaatattttggtttctttcctgtataattgcatatatagaagtctt ttcttaagttttttcttgtgcaaaaataacccatttacaatattctgacaataacaattttaaattcttcccatcaagta gataataatttaacaatcatttcacaattttgaaaagaatattattcctaaaaaggtgtgtgtgaattcaagcagtggcc tctgtgtatttgtatttatttaattcatccctgaaagctatgctatagtttgtttcctacatttagtatgtgagaggcca agggaaaaagaaggaaatactaaatttacttattttgatcatatggatccttcttttatgctcttggggcataagcaaca aatcctctgatttctataattcccttctcatttctgaagaattcaactggggtttgtggtgcatgtccacttttcccaga catattttatccattaaggcattcttgtcaatttttccagataggtgtgcactgatctggccaggtttctgagaatttcg tatcttcctagaaagcaggaagtatctcccatttttgcgtaggtgcacattattactaaaattgtagtattttctatctt tacatgtggttaagtaaatgttttacaacccacatggacctgcagagacctccacattgtatcctccatatgtacaaagg tggtattagcatgttccaatgttaattgaagcaacatttgaatcaggaactatctcacccatagcacacactttcagaga caatgcactattttacccacatatattacaatggctcttataaataatgttttatataatgttttgtattttttttaaaa tgccaagtagaatactacaaactaatttatttctactagtggaatttttattaaggaaacttaaaaacatttttagcatt tttgtacgagtgtatgttccatggaaatagatacattaacatcagtttataacccgttcctttgctttaatttaaaaatg gtaatacaatatatattttttataaatcagtacaataaaaatgaacattcccatataaaatgcctattttttaagtaagt gggcacagtattgtgtactaaaaccacaataaatcacaaacaaatttggtatttaattagtgattttatctaggcataat ttttcaaatgactcaaatgttttaagattatgatttagtgtaaatgttccttttatctgaaagttgataagtgtatacaa ataattatgacttacatttcatcctcaaaatattaacattccaatgcagcaaagtagacaaaggtaattatagatgatag tatgaagcagaaatattaatttttctgcaacttagaaaaatgagaatgctgttagaaacctagtgtatagggacagaatg ggaagccacatatggagtactttatgttcatgaattcttacatagataggaatactgtattgttgaacatctttgaattc acctgcagatatgcataacaactagtaacctgcaaatccttggatgcgatgttttgcaaaatagctcataaaaatgacag cattcatagtttgttcgggatgcacatgcactgcattataatctcttctcagattatgacagctatacatagtccttcag attcataggattaagttgtatattatatttcttaaactttttaatggatagttatgtctattgtgaaagataatctgcag cggcctctacatttctgatagcattatatttattaatacccaagaaatgataagtagtaatctatacacatcacatattg aatgcattactttaaaatctatttttataagaaaagtatttctatttgcacactgttactgttttttaatgaataaatgt caatatcaagccagcatggaagtttatagagatgcaaccctaaaattgcagttaaaatgtttgttgaaatttatcacatg aatgattgtggcttcgctgcaaaaaaagcccctttattttggcatgtgttgggtatgtaataattttacaggttaacagg ttcttaaattcacaatatttaattatggtatttaattccttgtaatatgacatttttattaagtgcttatttcatgtgac gatccattaaaaactgcagtccaaacactttttaagcggtctgtatttgatttcatcttagcatttaaagtaaaaaagtt atcatgcactgtatatgcttatttataagtatttgattagtatgcaaaagtgcagattttgactaggaagaggtatgtca taatgtgcagaaaagtgaatgcagcgcctggctggaaacagacacagcaatctttctgaagcaccgtgcagccttatatt tccctttttcaatgccttgaagccaatgttgattcctgatctctgcctggacaagtcccttcagtattcctcagtaagag ttcagaagtagcttaccttgggctaaaggagaatgagagctgtgtttttcttaaaaaataaaattcagccaatcctgata ttgctctcagttaaaatgatttagggatttggtgaactattctgtccagtgatattaaaagacctcaaaacttggacttc c |
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Protein
| Protein ID | habu1_s581_g02728.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02728.t1 MVALLAYRCFLWSSKEICFRASGFKIMSVHIVAFGNERDGFSEDDQQKSLIWTYLGRSALVSETDSNLLLNSASYLRNPA FTEYQACVFGNVRLVIHDCPLWDIFESDWYTSRNLIGEADIIVIKYSVNDKTSFQEVKDIYAPLIKKTLSHCSVPVIISA VGARQNEVPCTCPLCISDRGSCVTASEGIQLAKELGATYLELHSLNDFYIGKYFGGVLEYFMIQSLNQKSSEKMKKRKKS HKCHGVKPPQLDQPEKMPILKGETSHYDSDLHNLLFCCQCVDVIFYSEDLKEVAKAHRIVLCSISHVFMLLFNVKNPTDI QDSSIIRTAQSLFAATQETLFPILKHGTSCGSPVRVIVKDSFFCSCLTDILHFIYSGAFQWDLLEEHIKKKLKNPGNVEL VLDRVKCILKIPGKVNSSQNYRTYLSKRPLHLCNSSLRLFFNTTMLADVMFKIQGATVPAHKAVLVARCEVMAAMFSGNY IESNSFLVPVYGISKDTFLSFLEYLYTDSCCPASILQAMSLLICAEMYQVSRLQHICELYIITQLQSMPSRELTSTSLSV VSLLQKAKFHNSDCLSNWLLHFIASNYLIFSQKPEFEDLSVEERNFIEMHRWPSSMYLRQLAEYRNYIHSRKCHCLIM |
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