Gene
| Gene Model ID | habu1_s581_g02729 |
|---|---|
| Locus | habu1_scaffold581 : 102866 ... 112576 : + |
| To GenomeBrowser | habu1_scaffold581:102866..112576 |
| Genes list of scaffold | habu1_scaffold581 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| carnitine o-palmitoyltransferase mitochondrial-like | GO:0008152 GO:0016746 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s581_g02729.t1 | 1 | 1 | Carn_acyltransf | 59 | 527 | 0.0 | 386.5 | 0.0 | 0.0 | 386.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s581_g02729.t1 | gi|602649159|ref|XP_007430990.1| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial-like [Python bivittatus] | 0.0 |
| habu1_s581_g02729.t1 | gi|327263247|ref|XP_003216432.1| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s581_g02729.t1 | gi|637260369|ref|XP_008101271.1| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s581_g02729.t1 | gi|530640432|ref|XP_005306979.1| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial-like [Chrysemys picta bellii] | 0.0 |
| habu1_s581_g02729.t1 | gi|558142163|ref|XP_006118733.1| | PREDICTED: carnitine O-palmitoyltransferase 2, mitochondrial-like [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s581_g02729.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02729.t1 gttgcggtggggggggtggcatttcgccctttctcttccctctccggtcggagcatcccgacatgcgccgagcgaagccc ccgtggggcgcctcgatgctgcggtgcgcgcttagctgccgccagtactggaggaccgtaggacagccggaggggatcgt gtcggagcaggacatggatcatcatttcgtgcatcgaagcaccattcctaccatgcatttccagcccagcttgcccagac atactgtaaaaattgctacagaatttggaaaaggagaggggaagatcatacatcgtgatcttcttgaacatgatcggatt aataatcatacaagttatatatcaggaccctggtatgacatgtatctttcttcgagggatccagttgttttcaactacaa ccctttcatttctttaaatcctgatcccaaacctggatacaataatcaagtagttagagcaaccaatcttgttgtttcag cgttaaaatttcttaactccttgaagaatgactatttacggccagatatatattatgtaaaccgcaaatggggtcaaagt aaaatgttcaaatacttcatccgcgctcttccacctactctatcctggtatggagcatatttagtgaatgcttatccttt agacatgtcacagtataaatctctcttcaatagtaccaggatacctaatttaaataaggatacattatttacaagtgaat ttgcaagacatttgttggtgatgagaaatggtcatctttatgtttttgaagtactggatccttttggcaacattctacat ccatctgaaattcaagctcatttagcacaaataatatttgatgctgatcgcttgcctagatttgaactttcatgtctcac aactgaagaaagaaatacttgggcaaatataaggcagcaacttgtccaaaatggtaatgaagaatacttgaagaaaattg acagttcggtcttctgcctttgtttagataatgcttccccgcaagatgaaattgaaataactcattgttttcttcatgga tatggttttaatcgctggtttgacaaatcctttagtctgattgtcactagtgatggaaatgcaggaataaattttgaaca ctcttggggagatggtgttgcgattctgcgtttcattaatgaagtctatagagacagtacagagcatccagctcttctgc caggatccagtccagctttatttgttacagcttgtgacaagcttgaatttaatttgaatcattcaataacatctgcaata aatgctgcacgtaagaaatttgatgaaacattgaaaaagtttctcgtaaaatcatttaggtatgaaaaatatgggaaaga ttatatagtgaataaaaacttgagtccagatgctatttttcaacttgcttgtcaaatggctgtctatcatcaatatggaa agtttcttccttcttatgaagcatgtagtactgcagcttttaaacatggtcgcactgaaacaattcgaccaacatctgtg tacactaaaaggtgtacagatgcatttattgctgaacgaggaaagcatagcattcaagatatgagaaatatgattgaaga atgttcaaagtaccacaaacgcttgcaattggatgctacattaggttaggtcttttcaatactttgttatttgttttagc taagtcttgtgataaagtctagtaatgatacttatttg |
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Protein
| Protein ID | habu1_s581_g02729.t1 |
|---|---|
| Definition | - |
>habu1_s581_g02729.t1 MRRAKPPWGASMLRCALSCRQYWRTVGQPEGIVSEQDMDHHFVHRSTIPTMHFQPSLPRHTVKIATEFGKGEGKIIHRDL LEHDRINNHTSYISGPWYDMYLSSRDPVVFNYNPFISLNPDPKPGYNNQVVRATNLVVSALKFLNSLKNDYLRPDIYYVN RKWGQSKMFKYFIRALPPTLSWYGAYLVNAYPLDMSQYKSLFNSTRIPNLNKDTLFTSEFARHLLVMRNGHLYVFEVLDP FGNILHPSEIQAHLAQIIFDADRLPRFELSCLTTEERNTWANIRQQLVQNGNEEYLKKIDSSVFCLCLDNASPQDEIEIT HCFLHGYGFNRWFDKSFSLIVTSDGNAGINFEHSWGDGVAILRFINEVYRDSTEHPALLPGSSPALFVTACDKLEFNLNH SITSAINAARKKFDETLKKFLVKSFRYEKYGKDYIVNKNLSPDAIFQLACQMAVYHQYGKFLPSYEACSTAAFKHGRTET IRPTSVYTKRCTDAFIAERGKHSIQDMRNMIEECSKYHKRLQLDATLG |
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