Gene
| Gene Model ID | habu1_s5890_g16362 |
|---|---|
| Locus | habu1_scaffold5890 : 200311 ... 302205 : - |
| To GenomeBrowser | habu1_scaffold5890:200311..302205 |
| Genes list of scaffold | habu1_scaffold5890 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5890_g16362.t3 | 1 | 1 | GRAM | 510 | 586 | 1.4e-15 | 56.5 | 6.6e-19 | 2.5e-15 | 55.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5890_g16362.t3 | gi|530586290|ref|XP_005286910.1| | PREDICTED: GRAM domain-containing protein 4 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.2 |
| Venom grand-1 | 1.0 |
| Pit, infrared sensing | 2.4 |
| Nose | 2.3 |
| Brain-1 | 8.9 |
| Eye | 5.8 |
| fetal fibroblast | 2.7 |
| venom gland-2 | 3.9 |
| Brain-2 | 7.6 |
| Spleen | 3.9 |
| Lung | 1.3 |
| Liver | 3.3 |
| Kidney | 1.5 |
| Pancreas | 1.8 |
| Small intestine | 4.9 |
| Large intestine | 2.5 |
| Stomach | 3.3 |
| heart | 29.9 |
| ovary | 24.3 |
| cheek muscle | 3.9 |
Transcript
| Transcript ID | habu1_s5890_g16362.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16362.t1 gaagggagctgagcgagggcatcgccggctgggcagcgtgaatgaaagtttggtccgaattccgtgcaggggactccaac cgtcatgttaagataaagcagaaaggtgcagtgctgaacatgctaaagaggctggacaaaataaggttcagaggacataa gagagatgaattcccggacttagcagagtctcccaatgcttcagatactgaatgtggagatgaaatccctatgaaaatac ctcgtacatcaggctacgatgaactgagagacgctgctggtcctggggctgtcatcatggctacaggagttcccgattat aacagaacagagtctgacagattaaatgagatcaaaggccacttggaaattgccttgctggaaaagcactttctccagga ggagctaagaaagctcagagaagaaaccaatgctgaaacacttaaacaagagttagaaaaagaacgcttgaggaggacag aactggaacaaaaagtcaatgaaattctgaaagcaagagcagcagacgaatcgcctccatctactcagcagccgcccaaa gcacagaatggaacagataaacgcagccacatggtgtgttcaagagttcagaagtggatttatgataaatttggagaata tattgaagattttagatttcagccagaagaaaacacagtggaaaccgaagagccgcttagtgctagacggctaacagaaa atatgagaagattaaagagaggtgccaaacctgttacaaattttgtgaagaatctttctgccttatcggactggttttct gtctacacttctgctattgcctttattatctacatgaatgctgtatggcatggctgggccattcctatgttcttattttt agcaattttgaggttgtccctaaattacctcatagccagagggtggaggatacagtggagcattgtgcctgaagtttctg agcctattgaacctcccaaagaagacttaactgtatcagaaaaatttcagcttgttctggatgtggcacaaaaagcacag aatttatttgggaaaatgtcagatatattggaaaaaattaaaaatttgttcatgtgggtccagcctgaagtaacgcagaa actatatattgctttatgggcagcttttattgcatcctgctgtattccttacaggatcattgggcttgcaatgggacttt atgcaggaattaagttttttctgattgattttgtcttcaaacgttgtccaagactacgagcaaagtatgatactccttat atcatatggttgaacttgcctacggatcctcaactcaaagagagggctaatgctacagtatcaagacggcctcaaacagc agcaacccgaagctatgtaggttcgaacgcctcaacaggaatgaatcgagatgaggaaaccagtcgctttcacagcacga agagaggaaacttccatgaagtatttaacttgtcagaacatgagcgtccattggcagtgtgtgaaaatggctggcgctgc tgcttgataaacagagataggaagataaccactgattacattaggaatggagttctctatgttactgaaaactacttatg ctttgaaagctccaaatctggttcatctaaaagaaataaagttataaaacttgcagatataacagatattcaaaagtaca aagtactttctgttctcccaggatctgggatgggtattgcagtatccacaccatctacgcaaaaaccgctcgtgtttggt gccatgatacacagagacgaagcttttgagactattttcagccagtatgtgaagataacgtctgcagcatctgccagtga aagctagtatatcatccttgctggtttttataggaaacatcgtgaattttactcacccagtagtgaataaaaaggtggaa catccttcgtcatcagtcctgcaataattttctttgttgcatatgtctaatgttacagaagtgtattttatacatgcctt ccatggtttctgttggtttttatttactgttttttgtaataaaagaaaagaacagtgaaaatgctatcggcactgttagc cttgcacattaagcacttttaatgtttgctcactgacattaaaaagcttaggaagattcttagcaaaattagcttgaagg acactgtcttgtcttaattagacatccctgaactctgtgcttcatacgatatgcctttcgctacggttctgcacactccc actgcacaagttccattgatttcagtggcattactatatacacacgaatgggtgcaagtttgtgattgaactcggcaaaa ccggtcaagaacatgagtttgaggggtcttggttttcctaaatgaggtgtaaataatatttgaaagtatgagtatttgaa gctgtgcttccaggaaactttcatactgacttctgtatcttttcaaaagacatttatagtttagagacagttgggagatg caattaatcttcagtcctttgagagttggtatgctcatttcttcttgtcttaccttacacatcttgctttgtcatttatt ttatgtcactgtgttggcataacaaatgttctcagtgttttcaatagaaaagcaacttcctagaattatttggcatgctg cattatcctgtattttccttaaaatattggataaacataaagtttaaagttatcaaaaatgcattcattggagtgaagga ggaataatggaaatagtgttgcatcgatgtactacaagctctgcaccctttgtagtactttgaaatgtcatacgtatgta aaaaaagcagtgctgcaacattggatcaacatacttttgatgaaaccttggatctagctgttacttctgtacatgtccat aataccttttctttggtattcctatttggtgaatttggtattgcacaaacattaattagcagttattgatattttagttt ctcgagagctttagctacacttttgtggtaattaactttgcgtgtggtagcctttaatcatgaaaagaaattgagtagat ggctaaaacgccacataccaatttaatattttataatgatggccacaatacattaaatttggtttcttttatttcaaagt cagtgtttgggattagatggcccttaacagagcagcagtagatcctggaatctattctgtactccaaatgatcccctcag ttgctttttattatgtacgtagagtcaattgtttacaaatatgattggaactgtcaggtaggaaaacagagaggctgctt ctgtgctatgaattagtctctcccaaaccaatcccttgctttaaattctgttgttggctctgttgcatgcatttgcatgt aacatgttactgcggctgaattaatcttaattattatatgttcagatgtcataagaagatggacttttgcgaaaaaaatt ttttttaaggtcagaagcatgactaaaattgtgggcaataaatgctagaaaagtttagcaaact |
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| Transcript ID | habu1_s5890_g16362.t2 |
| Definition | - |
>habu1_s5890_g16362.t2 gaagggagctgagcgagggcatcgccggctgggcagcgtgaatgaaagtttggtccgaattccgtgcaggggactccaac cgtcatgttaagataaagcagaaaggtgcagtgctgaacatgctaaagaggctggacaaaataaggttcagaggacataa gagagatgaattcccggacttagcagagtctcccaatgcttcagatactgaatgtggagatgaaatccctatgaaaatac ctcgtacatcaggctacgatgaactgagagacgctgctggtcctggggctgtcatcatggctacaggagttcccgattat aacagaacagagtctgacagattaaatgagatcaaaggccacttggaaattgccttgctggaaaagcactttctccagga ggagctaagaaagctcagagaagaaaccaatgctgaaacacttaaacaagagttagaaaaagaacgcttgaggaggacag aactggaacaaaaagtcaatgaaattctgaaagcaagagcagcagacgaatcgcctccatctactcagcagccgcccaaa gcacagaatggaacagataaacgcagccacatggtgtgttcaagagttcagaagtggatttatgataaatttggagaata tattgaagattttagatttcagccagaagaaaacacagtggaaaccgaagagccgcttagtgctagacggctaacagaaa atatgagaagattaaagagaggtgccaaacctgttacaaattttgtgaagaatctttctgccttatcggactggttttct gtctacacttctgctattgcctttattatctacatgaatgctgtatggcatggctgggccattcctatgttcttattttt agcaattttgaggttgtccctaaattacctcatagccagagggtggaggatacagtggagcattgtgcctgaagtttctg agcctattgaacctcccaaagaagacttaactgtatcagaaaaatttcagcttgttctggatgtggcacaaaaagcacag aatttatttgggaaaatgtcagatatattggaaaaaattaaaaatttgttcatgtgggtccagcctgaagtaacgcagaa actatatattgctttatgggcagcttttattgcatcctgctgtattccttacaggatcattgggcttgcaatgggacttt atgcaggaattaagttttttctgattgattttgtcttcaaacgttgtccaagactacgagcaaagtatgatactccttat atcatatggttgaacttgcctacggatcctcaactcaaagagagggctaatgctacagtatcaagacggcctcaaacagc agcaacccgaagctatgtaggttcgaacgcctcaacaggaatgaatcgagatgaggaaaccagtcgctttcacagcacga agagaggaaacttccatgaagtatttaacttgtcagaacatgagcgtccattggcagtgtgtgaaaatggctggcgctgc tgcttgataaacagagataggaagataaccactgattacattaggaatggagttctctatgttactgaaaactacttatg ctttgaaagctccaaatctggttcatctaaaagaaataaagttataaaacttgcagatataacagatattcaaaagtaca aagtactttctgttctcccaggatctgggatgggtattgcagtatccacaccatctacgcaaaaaccgctcgtgtttggt gccatgatacacagagacgaagcttttgagactattttcagccagtatgtgaagataacgtctgcagcatctgccagtga aagctagtatatcatccttgctggtttttataggaaacatcgtgaattttactcacccagtagtgaataaaaaggtggaa catccttcgtcatcagtcctgcaataattttctttgttgcatatgtctaatgttacagaagtgtattttatacatgcctt ccatggtttctgttggtttttatttactgttttttgtaataaaagaaaagaacagtgaaaatgct |
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| Transcript ID | habu1_s5890_g16362.t3 |
| Definition | - |
>habu1_s5890_g16362.t3 ggtcgccaagcaagtctgtccgccattttttttgtccgccattttttttgtccgccattttttcccccttttccggcggg tgccttacctcccttgggctgggccagctggtggtcagcctgctccatctctgccgcttgccagctacgcctcggccggc gcagggggcggaaccacgcatgcgcggcgctcccgggcagggaaagtcctcgacttacgaccggtttagtcctcgactta cgatcggtttagtcctcgacttacgactggttggggtcgcagcattaaaaaggttctttttggaagatgggagtagatgt gtgaaaaaggactccaaccgtcatgttaagataaagcagaaaggtgcagtgctgaacatgctaaagaggctggacaaaat aaggttcagaggacataagagagatgaattcccggacttagcagagtctcccaatgcttcagatactgaatgtggagatg aaatccctatgaaaatacctcgtacatcaggctacgatgaactgagagacgctgctggtcctggggctgtcatcatggct acaggagttcccgattataacagaacagagtctgacagattaaatgagatcaaaggccacttggaaattgccttgctgga aaagcactttctccaggaggagctaagaaagctcagagaagaaaccaatgctgaaacacttaaacaagagttagaaaaag aacgcttgaggaggacagaactggaacaaaaagtcaatgaaattctgaaagcaagagcagcagacgaatcgcctccatct actcagcagccgcccaaagcacagaatggaacagataaacgcagccacatggtgtgttcaagagttcagaagtggattta tgataaatttggagaatatattgaagattttagatttcagccagaagaaaacacagtggaaaccgaagagccgcttagtg ctagacggctaacagaaaatatgagaagattaaagagaggtgccaaacctgttacaaattttgtgaagaatctttctgcc ttatcggactggttttctgtctacacttctgctattgcctttattatctacatgaatgctgtatggcatggctgggccat tcctatgttcttatttttagcaattttgaggttgtccctaaattacctcatagccagagggtggaggatacagtggagca ttgtgcctgaagtttctgagcctattgaacctcccaaagaagacttaactgtatcagaaaaatttcagcttgttctggat gtggcacaaaaagcacagaatttatttgggaaaatgtcagatatattggaaaaaattaaaaatttgttcatgtgggtcca gcctgaagtaacgcagaaactatatattgctttatgggcagcttttattgcatcctgctgtattccttacaggatcattg ggcttgcaatgggactttatgcaggaattaagttttttctgattgattttgtcttcaaacgttgtccaagactacgagca aagtatgatactccttatatcatatggttgaacttgcctacggatcctcaactcaaagagagggctaatgctacagtatc aagacggcctcaaacagcagcaacccgaagctatgtaggttcgaacgcctcaacaggaatgaatcgagatgaggaaacca gtcgctttcacagcacgaagagaggaaacttccatgaagtatttaacttgtcagaacatgagcgtccattggcagtgtgt gaaaatggctggcgctgctgcttgataaacagagataggaagataaccactgattacattaggaatggagttctctatgt tactgaaaactacttatgctttgaaagctccaaatctggttcatctaaaagaaataaagttataaaacttgcagatataa cagatattcaaaagtacaaagtactttctgttctcccaggatctgggatgggtattgcagtatccacaccatctacgcaa aaaccgctcgtgtttggtgccatgatacacagagacgaagcttttgagactattttcagccagtatgtgaagataacgtc tgcagcatctgccagtgaaagctagtatatcatccttgctggtttttataggaaacatcgtgaattttactcacccagta gtgaataaaaaggtggaacatccttcgtcatcagtcctgcaataattttctttgttgcatatgtctaatgttacagaagt gtattttatacatgccttccatggtttctgttggtttttatttactgttttttgtaataaaagaaaagaacagtgaaaat gctatcggcactgttagccttgcacattaagcacttttaatgtttgctcactgacattaaaaagcttaggaagattctta gcaaaattagcttgaaggacactgtcttgtcttaattagacatccctgaactctgtgcttcatacgatatgcctttcgct acggttctgcacactcccactgcacaagttccattgatttcagtggcattactatatacacacgaatgggtgcaagtttg tgattgaactcggcaaaaccggtcaagaacatgagtttgaggggtcttggttttcctaaatgaggtgtaaataatatttg aaagtatgagtatttgaagctgtgcttccaggaaactttcatactgacttctgtatcttttcaaaagacatttatagttt agagacagttgggagatgcaattaatcttcagtcctttgagagttggtatgctcatttcttcttgtcttaccttacacat cttgctttgtcatttattttatgtcactgtgttggcataacaaatgttctcagtgttttcaatagaaaagcaacttccta gaattatttggcatgctgcattatcctgtattttccttaaaatattggataaacataaagtttaaagttatcaaaaatgc attcattggagtgaaggaggaataatggaaatagtgttgcatcgatgtactacaagctctgcaccctttgtagtactttg aaatgtcatacgtatgtaaaaaaagcagtgctgcaacattggatcaacatacttttgatgaaaccttggatctagctgtt acttctgtacatgtccataataccttttctttggtattcctatttggtgaatttggtattgcacaaacattaattagcag ttattgatattttagtttctcgagagctttagctacacttttgtggtaattaactttgcgtgtggtagcctttaatcatg aaaagaaattgagtagatggctaaaacgccacataccaatttaatattttataatgatggccacaatacattaaatttgg tttcttttatttcaaagtcagtgtttgggattagatggcccttaacagagcagcagtagatcctggaatctattctgtac tccaaatgatcccctcagttgctttttattatgtacgtagagtcaattgtttacaaatatgattggaactgtcaggtagg aaaacagagaggctgcttctgtgctatgaattagtctctcccaaaccaatcccttgctttaaattctgttgttggctctg ttgcatgcatttgcatgtaacatgttactgcggctgaattaatcttaattattatatgttcagatgtcataagaagatgg acttttgcgaaaaaaattttttttaaggtcagaagcatgactaaaattgtgggcaataaatgctagaaaagtttagcaaa ct |
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Protein
| Protein ID | habu1_s5890_g16362.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16362.t1 MKVWSEFRAGDSNRHVKIKQKGAVLNMLKRLDKIRFRGHKRDEFPDLAESPNASDTECGDEIPMKIPRTSGYDELRDAAG PGAVIMATGVPDYNRTESDRLNEIKGHLEIALLEKHFLQEELRKLREETNAETLKQELEKERLRRTELEQKVNEILKARA ADESPPSTQQPPKAQNGTDKRSHMVCSRVQKWIYDKFGEYIEDFRFQPEENTVETEEPLSARRLTENMRRLKRGAKPVTN FVKNLSALSDWFSVYTSAIAFIIYMNAVWHGWAIPMFLFLAILRLSLNYLIARGWRIQWSIVPEVSEPIEPPKEDLTVSE KFQLVLDVAQKAQNLFGKMSDILEKIKNLFMWVQPEVTQKLYIALWAAFIASCCIPYRIIGLAMGLYAGIKFFLIDFVFK RCPRLRAKYDTPYIIWLNLPTDPQLKERANATVSRRPQTAATRSYVGSNASTGMNRDEETSRFHSTKRGNFHEVFNLSEH ERPLAVCENGWRCCLINRDRKITTDYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLADITDIQKYKVLSVLPGSGMGIA VSTPSTQKPLVFGAMIHRDEAFETIFSQYVKITSAASASES |
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| Protein ID | habu1_s5890_g16362.t2 |
| Definition | - |
>habu1_s5890_g16362.t2 MKVWSEFRAGDSNRHVKIKQKGAVLNMLKRLDKIRFRGHKRDEFPDLAESPNASDTECGDEIPMKIPRTSGYDELRDAAG PGAVIMATGVPDYNRTESDRLNEIKGHLEIALLEKHFLQEELRKLREETNAETLKQELEKERLRRTELEQKVNEILKARA ADESPPSTQQPPKAQNGTDKRSHMVCSRVQKWIYDKFGEYIEDFRFQPEENTVETEEPLSARRLTENMRRLKRGAKPVTN FVKNLSALSDWFSVYTSAIAFIIYMNAVWHGWAIPMFLFLAILRLSLNYLIARGWRIQWSIVPEVSEPIEPPKEDLTVSE KFQLVLDVAQKAQNLFGKMSDILEKIKNLFMWVQPEVTQKLYIALWAAFIASCCIPYRIIGLAMGLYAGIKFFLIDFVFK RCPRLRAKYDTPYIIWLNLPTDPQLKERANATVSRRPQTAATRSYVGSNASTGMNRDEETSRFHSTKRGNFHEVFNLSEH ERPLAVCENGWRCCLINRDRKITTDYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLADITDIQKYKVLSVLPGSGMGIA VSTPSTQKPLVFGAMIHRDEAFETIFSQYVKITSAASASES |
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| Protein ID | habu1_s5890_g16362.t3 |
| Definition | - |
>habu1_s5890_g16362.t3 MRGAPGQGKSSTYDRFSPRLTIGLVLDLRLVGVAALKRFFLEDGSRCVKKDSNRHVKIKQKGAVLNMLKRLDKIRFRGHK RDEFPDLAESPNASDTECGDEIPMKIPRTSGYDELRDAAGPGAVIMATGVPDYNRTESDRLNEIKGHLEIALLEKHFLQE ELRKLREETNAETLKQELEKERLRRTELEQKVNEILKARAADESPPSTQQPPKAQNGTDKRSHMVCSRVQKWIYDKFGEY IEDFRFQPEENTVETEEPLSARRLTENMRRLKRGAKPVTNFVKNLSALSDWFSVYTSAIAFIIYMNAVWHGWAIPMFLFL AILRLSLNYLIARGWRIQWSIVPEVSEPIEPPKEDLTVSEKFQLVLDVAQKAQNLFGKMSDILEKIKNLFMWVQPEVTQK LYIALWAAFIASCCIPYRIIGLAMGLYAGIKFFLIDFVFKRCPRLRAKYDTPYIIWLNLPTDPQLKERANATVSRRPQTA ATRSYVGSNASTGMNRDEETSRFHSTKRGNFHEVFNLSEHERPLAVCENGWRCCLINRDRKITTDYIRNGVLYVTENYLC FESSKSGSSKRNKVIKLADITDIQKYKVLSVLPGSGMGIAVSTPSTQKPLVFGAMIHRDEAFETIFSQYVKITSAASASE S |
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