Gene
| Gene Model ID | habu1_s5890_g16363 |
|---|---|
| Locus | habu1_scaffold5890 : 319776 ... 324349 : + |
| To GenomeBrowser | habu1_scaffold5890:319776..324349 |
| Genes list of scaffold | habu1_scaffold5890 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cadherin egf lag seven-pass g-type receptor 1- partial | GO:0001764 GO:0004930 GO:0005509 GO:0005634 GO:0005886 GO:0007156 GO:0007186 GO:0007266 GO:0007626 GO:0009952 GO:0016021 GO:0032956 GO:0042060 GO:0042472 GO:0045176 GO:0048105 GO:0060488 GO:0060489 GO:0060490 GO:0090179 GO:0090251 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5890_g16363.t1 | 8 | 1 | Cadherin | 294 | 388 | 0.0 | 560.4 | 4.7e-22 | 1.4e-18 | 66.9 |
| habu1_s5890_g16363.t1 | 8 | 2 | Cadherin | 404 | 496 | 0.0 | 560.4 | 1.8e-24 | 5.2e-21 | 74.6 |
| habu1_s5890_g16363.t1 | 8 | 3 | Cadherin | 511 | 603 | 0.0 | 560.4 | 7.2e-27 | 2.1e-23 | 82.3 |
| habu1_s5890_g16363.t1 | 8 | 4 | Cadherin | 617 | 719 | 0.0 | 560.4 | 8.5e-21 | 2.5e-17 | 62.8 |
| habu1_s5890_g16363.t1 | 8 | 5 | Cadherin | 733 | 821 | 0.0 | 560.4 | 1.4e-20 | 4.3e-17 | 62.1 |
| habu1_s5890_g16363.t1 | 8 | 6 | Cadherin | 835 | 923 | 0.0 | 560.4 | 4.2e-27 | 1.2e-23 | 83.1 |
| habu1_s5890_g16363.t1 | 8 | 7 | Cadherin | 939 | 1030 | 0.0 | 560.4 | 1.3e-21 | 3.7e-18 | 65.5 |
| habu1_s5890_g16363.t1 | 8 | 8 | Cadherin | 1046 | 1131 | 0.0 | 560.4 | 1.3e-21 | 3.7e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5890_g16363.t1 | gi|602670776|ref|XP_007440909.1| | PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like, partial [Python bivittatus] | 0.0 |
| habu1_s5890_g16363.t1 | gi|637305650|ref|XP_008109819.1| | PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s5890_g16363.t1 | gi|637305654|ref|XP_003221567.2| | PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s5890_g16363.t1 | gi|637305646|ref|XP_008109818.1| | PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5890_g16363.t1 | gi|524982521|ref|XP_005039272.1| | PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial [Ficedula albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.0 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.5 |
| Brain-1 | 0.8 |
| Eye | 0.1 |
| fetal fibroblast | 2.5 |
| venom gland-2 | 0.9 |
| Brain-2 | 0.9 |
| Spleen | 0.3 |
| Lung | 0.1 |
| Liver | 0.1 |
| Kidney | 0.4 |
| Pancreas | 0.7 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 1.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s5890_g16363.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16363.t1 cggcggcgcccccgattgggtggcgaggagccattttgagcgccgttgcgacgaacctcgacgcagcatctgccgccaac tttgtaagcctcggagatgcgccgtttgccgggggccgcctggctgccgtggatttcgctgctggcgctcgcgacggcgg gctgggagctgcacctcctttgcggggacggcggcggcggcggcggcggcaacaacaacccgggccgcttgctcttggac ctgtcgctggggccggagtggctctgcgctctcgacgagactcggacgccccgtcagttgagggacgccgtggaagcgac gagcgacgggctgctgcggacgacggcggcgccggtggactgcgcgggcttgagaagaaatccgctgcccctccatttgc gcctggcttctccggccggcggcgtcctgctctcgctccgcctgcctgtttacctgcacggctggggctcccccggccga tccccccacgttgccaccctgcctcgcctggccatttttccagctcttcccctcgggcagcgtttggcttctctgctgtg cttctcccctccctctaggcagcaggtgcttcccaaagtgggggggacaaaggcaggacccctgctctgggctctcgtga ccctgacaagcttcccacggtgtatctgccccaacggtcagcctttggggcaagttggggagaaaccactagactgccat cttccccaagggagctgccccctgcagctcctttgtcacttgaagaggacccaacagagtgttctgatagagctggggaa gcctaggcattggggagtgaaacagccattcggggataaactagaggtgaatagaagcaggcaagaggtctccccacaat tggagacccggagtggtagcaattgggattctgggcctcgaggacctcggaggatgaggagtgtgaatagcccacctcag ttcaaattgcccaattaccaagtttcaattgctgagaaccagcctgcagatacagcggtcatcaccctagaagcccacga cccagatgaaggggaggcaggccgcttaacctattcgatggaggccttttttgacaaaagatccaatgattacttctctg ttgattctaagaccggagcaatagttaccacccgtaagctggatcgagagacaaaagatacccacgtgcttcaggtaact gcaacggatcatgggtctccacggcatcgctcagcagtcaccttcctgactgtgactgtaagtgacaccaatgaccatga tcctgtgtttgaacagccagaatatcgagagaccattagagagaacctggagctaggttatgaggtgctaacaattcgtg ccacagatgaggatgctccagacaatgctaatttactatatcgtatcctagaaccaggctctgcagaaggaatttttgag attgacccatattctggtgttgtgagaacttctgccactgtggatagagaggaagtctcagagtaccatcttgtggtcga agccaatgaccaagggaaagaccctggtccacgaagtgccacagttacagtgcatatcaccgtggaagacgagaatgaca attccccacaattcagtgaaaaacgctacttggtacaaataccagagaacagtccaatcaacagccaggtattacaagta aaagccactgaccgagaccgtggcaacaatgcccaggtccattatagcattgtcagtggcaacttgaaaggccaatttta tatccattctttctctggctctattgacttgatcaatcccctggactatgagaccattcgagagtacaccctcaggatca aggcacaagatggaggaaggcctccacagatcaattcaagcggaatggtgtccatccaagtgttagatgtaaatgacaat gcccctatttttgtgagcaccccctttcaagccacagtgctagaaaatgtccccataggatattcagtgttacacatcca ggcagtagatgctgacgctggggacaatgctcgtttggaatacaaactctttgaactctcccatcttcctgccttggcat ccacagatgggaatacagtgtttccattccagatcaacaatagcacaggttggattacagtgtcaactgagcttgaccga gagactaccgagaattaccactttggggtggaggccagagatcagggagtgcctgtcatgtcttcctctgccagtgtatc tatcactgtcctcgatgtcaatgataacagtcctactttcactgaaaaagtatatcagctcaggctgaatgaggatgcag cggtaggcagcagcgtcttgaccttgactgcaatggacaaagatgtcaacagtgtagtaacctaccagatcacgagtggc aacacaaggaatcgctttgccattactagtcagagtggtggtggtctgattactctggccttgccccttgattataagca ggaaaggcagtatgtattgactgtcactgcttcagatggaactctgtttgatacagtgcaagtcttcatcaatgtcacag atgccaatacacaccgaccggttttccaaagttcacactataccgtgagtgtcagtgaggacaagcccattggaacatcc attgtaacaatcagcgccactgatgaagatactggagagaacgcaagaattacttacatcttggaagacaacatccctca gttccgcattgatcctgacacaggaacaatcactaccttgatggaattagactatgaagaccaagcttcttacacgttag ccatcacagcccaggacaatgggatcccccaaaaatctgataccacctatgtggagatcctcattctagatgccaatgac aatgctcctcgttttcttcgagatcggtatctgggctctgtttttgaagatgtacccctgtcccacagcgttttgcaggt gtccgctgtagaccgtgactcgggtcccaatggccgccttgtttatactttccagggcggggatgatggtgatggagatt tttacattgaagccacatcaggggtgatacggacattgcgcaagctggatcgtgaaaacgtggctgtctacagcttgcgt gcttttgctgtggataggggtagcccacctctcaaggcatctgttgacatccaggttactgtattggatatcaatgataa cccccctgtttttgaacaagatgaatttgacatctttattgaagagaacagtcctgttggttcaattgtggccaggatta gtgcagttgatcctgatgaaggaaccaatgcacagatcatgtatcagatagtagaggggaatattcctgaggtcttccag cttgatcttcttaatggtgaccttacagccctgatggatctggattatgagagccagacagagtatgtaattgtggtaca agctacctcagccccacttgtcagccgagctactgtgcatatacgcctcctagatcaaaatgacaaccctcctgtgttgc atgactttcagattctgtttaataattatgtcaccaacaaatctaatagctttccttctggagtgattggaaagatccct gcccatgatcctgatatatctgaccaacttgactatacctttgtccagggcaatgaattaaacctgttggttttggattc tgttactggagaactcaagctcagccgagatttggacaacaacagaccccttgaggccttaatgaaagtatcagtttctg gtgagtgtatatcttttggagtgtatatcttttgtgatgtcagataatgatgagtcctaactgcctatattggatgattc cttataattataatgaatatgtctgtaggagcaaatgctcaataaatacctttcttgtgagaccacaa |
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Protein
| Protein ID | habu1_s5890_g16363.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16363.t1 MRRLPGAAWLPWISLLALATAGWELHLLCGDGGGGGGGNNNPGRLLLDLSLGPEWLCALDETRTPRQLRDAVEATSDGLL RTTAAPVDCAGLRRNPLPLHLRLASPAGGVLLSLRLPVYLHGWGSPGRSPHVATLPRLAIFPALPLGQRLASLLCFSPPS RQQVLPKVGGTKAGPLLWALVTLTSFPRCICPNGQPLGQVGEKPLDCHLPQGSCPLQLLCHLKRTQQSVLIELGKPRHWG VKQPFGDKLEVNRSRQEVSPQLETRSGSNWDSGPRGPRRMRSVNSPPQFKLPNYQVSIAENQPADTAVITLEAHDPDEGE AGRLTYSMEAFFDKRSNDYFSVDSKTGAIVTTRKLDRETKDTHVLQVTATDHGSPRHRSAVTFLTVTVSDTNDHDPVFEQ PEYRETIRENLELGYEVLTIRATDEDAPDNANLLYRILEPGSAEGIFEIDPYSGVVRTSATVDREEVSEYHLVVEANDQG KDPGPRSATVTVHITVEDENDNSPQFSEKRYLVQIPENSPINSQVLQVKATDRDRGNNAQVHYSIVSGNLKGQFYIHSFS GSIDLINPLDYETIREYTLRIKAQDGGRPPQINSSGMVSIQVLDVNDNAPIFVSTPFQATVLENVPIGYSVLHIQAVDAD AGDNARLEYKLFELSHLPALASTDGNTVFPFQINNSTGWITVSTELDRETTENYHFGVEARDQGVPVMSSSASVSITVLD VNDNSPTFTEKVYQLRLNEDAAVGSSVLTLTAMDKDVNSVVTYQITSGNTRNRFAITSQSGGGLITLALPLDYKQERQYV LTVTASDGTLFDTVQVFINVTDANTHRPVFQSSHYTVSVSEDKPIGTSIVTISATDEDTGENARITYILEDNIPQFRIDP DTGTITTLMELDYEDQASYTLAITAQDNGIPQKSDTTYVEILILDANDNAPRFLRDRYLGSVFEDVPLSHSVLQVSAVDR DSGPNGRLVYTFQGGDDGDGDFYIEATSGVIRTLRKLDRENVAVYSLRAFAVDRGSPPLKASVDIQVTVLDINDNPPVFE QDEFDIFIEENSPVGSIVARISAVDPDEGTNAQIMYQIVEGNIPEVFQLDLLNGDLTALMDLDYESQTEYVIVVQATSAP LVSRATVHIRLLDQNDNPPVLHDFQILFNNYVTNKSNSFPSGVIGKIPAHDPDISDQLDYTFVQGNELNLLVLDSVTGEL KLSRDLDNNRPLEALMKVSVSGECISFGVYIFCDVR |
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