Gene
| Gene Model ID | habu1_s5890_g16367 |
|---|---|
| Locus | habu1_scaffold5890 : 499113 ... 511256 : - |
| To GenomeBrowser | habu1_scaffold5890:499113..511256 |
| Genes list of scaffold | habu1_scaffold5890 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5890_g16367.t1 | 1 | 1 | GTSE1_N | 22 | 162 | 1.4013e-45 | 154.3 | 0.0 | 1.4013e-45 | 154.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5890_g16367.t1 | gi|602661431|ref|XP_007436369.1| | PREDICTED: G2 and S phase-expressed protein 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s5890_g16367.t1 | gi|637305772|ref|XP_008109846.1| | PREDICTED: G2 and S phase-expressed protein 1 [Anolis carolinensis] | 0.0 |
| habu1_s5890_g16367.t1 | gi|530586277|ref|XP_005286904.1| | PREDICTED: G2 and S phase-expressed protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5890_g16367.t1 | gi|558150084|ref|XP_006120474.1| | PREDICTED: G2 and S phase-expressed protein 1 [Pelodiscus sinensis] | 0.0 |
| habu1_s5890_g16367.t1 | gi|591380088|ref|XP_007064589.1| | PREDICTED: G2 and S phase-expressed protein 1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.8 |
| Nose | 2.3 |
| Brain-1 | 0.5 |
| Eye | 0.6 |
| fetal fibroblast | 18.6 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.3 |
| Spleen | 1.2 |
| Lung | 0.1 |
| Liver | 0.2 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.5 |
| Large intestine | 0.5 |
| Stomach | 1.6 |
| heart | 0.2 |
| ovary | 161.3 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s5890_g16367.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16367.t1 aaccttgcccagctcagacaagaaaaccggactagtgacactatggaagacagaaaaacattggattcagaaagtaaaac aacagaagttacttctacttctactgatttttacctcctgactgaagaaaaatttgattttgacctttcactgtctccca caagcgaaaatgaagatgaagtttttgttggaccagtgggacataaagaaaaatgtattgctgtgcaccttgaaacccat gaagagagtcaaaagaaaattcagtctctgacatacgatccaacctggagccctcctgcaggagataaatttgtggaaat atttaaagaagctcacttgctagctttccagcttaaaagtggaaacaaaacagaaaaaaataacactattcatctgaggg gggaaaagacagagggcgttgacaagtttgtgaaagaatcaaagtcaaaactgaaaatccttgaaaaagaaatagtgaca gataaaacaccaacaaccactagaagagagacatactgtatatgggaaagcccaagcagtcaactgctgccttcacttca gaagcgtttagggcaacctgttacgataagggacagcccacgttctccccgagtgtctctgaacacaccaagtcctgcta aaacaaataagctacctaaaatgcacactgtatcctcagcccatgcaaagaatgacacaaaccttaaaaaaagcaaattt cagactgtgaaaacatcacctgcacttaggaataacagctacttagcagcaggcgagcctaaacaaggacaattgcccag ttcttccaacatgatttattcaaacagtatgggatcatctgaagatttgctctctgacaaatcaagcatagcttcggatg caggagaattgtcattttctaccagctcatccatgcaaagcaagagaactcttcctactcccaccaagttggaaatgaag aaaagacaactgaaacctcctaataatgttcatatgcgaagaaatacttcatcttcctcctcgtcctctatttccagcat gaattcaagtttgaattcaagtctgtcaacttctcctaaaagaggaaatgtcaaaacatgtgttacaaaagctcctgcag acatctctaggcgctcttctgtaacaagcaagatttccatagttaaacctatgaaaggattttcaatgaatgctgcccac tctgatgcatctggaaaacaactcacacccagatgtgctaaaggaaatcctgtgaatatacccaagtataaagctaccct gacatctgaaagtgcaagcagtaatctgcagaaaggttcagattctaatcttcagaaattactaccgaaaaacacattag gaaatgcaagtacaagttcaagtcttaaactaaactctaaaccagcagctccaaacttaaagcgagaaaatgaagccacc agagtattgcaatcaaacccagtattatctgatagcaatattgaaagcagtattgcagtttccacacctgtcaaacaatt agaaagaactgtattaaaatcctgctctgccgtgaagccttctttacggactccagacagaaggcattctacattgccca tgtctgttggtcgatatacctcaggaattccaacaccgactcccaaaacagtgcccagaaaaatgacatcccctaattgt ttagctcttcgtcacatctccagtgtgtcttctaaaaaggctataggaatgagttctaggggtttgactaagaacaagac atggatgtcttcaagcccatcttcaacagaaggagacttatctccaccacaagttatacctattgcacttgctttttcac cagataaaccttttatcgaaatagcagaagacattactaaaaaagggaaaacaacagaagtaatactagctaagaaggac ttgttgatagaatttgaaacagttaaaacaccagttgccatgcaggagtatgaaaacaaacctctaattgatctttttaa cactcctgaaataactaaagcccctccattgaaacctacagggcagctaatagatctgaactctcctttgatgaaactaa gtcctgaaggaaataaagaaaattcacctcttctgaaattctgatttttatttttttaaaaatggttttcaaactggaaa aaaatctagagtttagcaactaatgtttcactggtcagtagttttaatactggaaaaaagttatgaaattaaaattgtga acttgaaatgctgatatattgctgctaggaaaaatagagaagatatggtttttctatattttaagcaattttggttgtag caaatatctttcctgataaaaatatttgttttaaaattgtgcaaagtaaattgtagatgtcaaatatttgaaataaagtt aagcattttaaatattgat |
|
Protein
| Protein ID | habu1_s5890_g16367.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16367.t1 MEDRKTLDSESKTTEVTSTSTDFYLLTEEKFDFDLSLSPTSENEDEVFVGPVGHKEKCIAVHLETHEESQKKIQSLTYDP TWSPPAGDKFVEIFKEAHLLAFQLKSGNKTEKNNTIHLRGEKTEGVDKFVKESKSKLKILEKEIVTDKTPTTTRRETYCI WESPSSQLLPSLQKRLGQPVTIRDSPRSPRVSLNTPSPAKTNKLPKMHTVSSAHAKNDTNLKKSKFQTVKTSPALRNNSY LAAGEPKQGQLPSSSNMIYSNSMGSSEDLLSDKSSIASDAGELSFSTSSSMQSKRTLPTPTKLEMKKRQLKPPNNVHMRR NTSSSSSSSISSMNSSLNSSLSTSPKRGNVKTCVTKAPADISRRSSVTSKISIVKPMKGFSMNAAHSDASGKQLTPRCAK GNPVNIPKYKATLTSESASSNLQKGSDSNLQKLLPKNTLGNASTSSSLKLNSKPAAPNLKRENEATRVLQSNPVLSDSNI ESSIAVSTPVKQLERTVLKSCSAVKPSLRTPDRRHSTLPMSVGRYTSGIPTPTPKTVPRKMTSPNCLALRHISSVSSKKA IGMSSRGLTKNKTWMSSSPSSTEGDLSPPQVIPIALAFSPDKPFIEIAEDITKKGKTTEVILAKKDLLIEFETVKTPVAM QEYENKPLIDLFNTPEITKAPPLKPTGQLIDLNSPLMKLSPEGNKENSPLLKF |
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