Gene
| Gene Model ID | habu1_s5890_g16371 |
|---|---|
| Locus | habu1_scaffold5890 : 651786 ... 715436 : - |
| To GenomeBrowser | habu1_scaffold5890:651786..715436 |
| Genes list of scaffold | habu1_scaffold5890 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| copine-8-like isoform x1 | GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5890_g16371.t2 | 2 | 1 | C2 | 42 | 128 | 3.6e-31 | 106.8 | 1.3e-16 | 6.5e-13 | 48.3 |
| habu1_s5890_g16371.t2 | 2 | 2 | C2 | 198 | 282 | 3.6e-31 | 106.8 | 4.2e-19 | 2.1e-15 | 56.3 |
| habu1_s5890_g16371.t2 | 1 | 1 | Copine | 362 | 506 | 0.0 | 196.8 | 0.0 | 0.0 | 196.2 |
| habu1_s5890_g16371.t2 | 1 | 1 | vWA-TerF-like | 432 | 518 | 3.0e-09 | 37.0 | 1.6e-12 | 7.9e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5890_g16371.t2 | gi|591363159|ref|XP_007056484.1| | PREDICTED: copine-8-like isoform X2 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.3 |
| Venom grand-1 | 14.1 |
| Pit, infrared sensing | 16.2 |
| Nose | 13.1 |
| Brain-1 | 13.2 |
| Eye | 6.5 |
| fetal fibroblast | 11.1 |
| venom gland-2 | 9.8 |
| Brain-2 | 8.9 |
| Spleen | 6.4 |
| Lung | 19.6 |
| Liver | 9.9 |
| Kidney | 6.8 |
| Pancreas | 6.9 |
| Small intestine | 5.4 |
| Large intestine | 7.7 |
| Stomach | 5.7 |
| heart | 3.4 |
| ovary | 8.8 |
| cheek muscle | 22.4 |
Transcript
| Transcript ID | habu1_s5890_g16371.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16371.t1 agcgccacctcttccccctccgcctcgccccgcctttggccccacatgttcggtccggaaaaactgttggggcagctgcc caagctggagagatacgggaatatggcgtccgtgggggattttaacccggtgagcgccaacgtgccggccacccgggtgg agatctccgtgtcttgcaggaaccttttggatagagatacattttcaaaatctgatccaatttgtgttttgtacacccaa gggatgggaaataaagaatggagagagtttggaagaacagaagtaattgacaacactttgaacccagatttcgtaagaaa atttataatggattacttttttgaggagagacagaacctgcgatttgatttgtatgatgttgattctaagagtccaaacc tttcaaagcatgatttcttgggacaagtgttctgtacactaggagaaattgttgggtcacaaggaagcagattagaaaag ccagttataggaattcctgggaaaaaatgtggcacaataatactgacagcagaggaactgaactgttgccgggaagctgt tttgatgcaattttgtgcaaacaaattagacaagaaagatttttttgggaaatctgatcccttcctggtattttttcgta gcaatgaagatggcagtttcacaatctgccataagacagaagttataaagaacactttaaatccagtatggcaggctttc aagctatcgatcagagcactttgtaatggagattatgacagaacaattaaggtagaagtgtatgactgggatagagatgg aagtcatgattttattggagaattcacaacaagctatagggaattatctagaggccagtcacagtttaatgtatatgagg taataaatccaaagaaaaaggcaaaaaagaaaaagtatgttaattcaggaacagtaactttactttccttcctagtggaa acagaagtttcatttctcgactatattaaaggagggactcaaatcaatttcaccgtggctattgattttacagcttcaaa tggtaaccctgcacatccaacttcacttcactacatgaatccataccaactgaatgcatatggcatggcattaaaagcag taggtgaaatcattcaagactatgatagtgacaaaatgtttccagctctaggttttggtgcaaaactgcccccggatgga agaatatctcatgagtttgctttgaatggaaacccacaaaatccttattgcaatggaattgatggcgtaatggaagcgta ctatatgagtttaaaatctgtgcagctttatggaccaaccaactttgctccagttattaatcatgtagcaagatatgctg cctcaataaaagatggctcccagtattttgttcttctcattattacagatggagtcatttctgatatggctcagacaaag gagtccatagtgcatgctgcaaagtttccaatgtcaataataatagtgggtgttggacctgcggaatttgatgccatgga agaattggatggtgatgaaataagggtttcatcaagaggagtttatgcagaaagagatatagtacagtttgtaccatttc gggattatgttgacagaactggaaatcacgtgttaagtatggcccgacttgcaagagatgtcttagctgagatcccggac cagtttctttcctacatgagggtcagaggaatcaagccatttccggcaccccctccatacacacccccgattcacgtggt gcagactcagatatgagtactttgaatattgaatacttttcaaaattataccgtactgccaagaaagagttccagtacag tgacgcactttaagagccagcaagttctttgtatgcagtgagtagaattttcgagtgggctttggaaaaacataaaaaaa ataataattaaaacttcatataccaaaatgttcaatcttgctgcacacgcaactgaacagcttttatttacaagaagcta aatggttaagtcgtttctaagtgttactctgtttctaacagaaaatgcctattatgtgggttttttggagaaagcacaag accacgggttctattcaaaagtcttttgtctttctgacttaatatgtatatataatgtgaatgcaaatcctctgtatcac tgtttacatgttactacttttgaaatttaactactttttatagttattcttaaaacatttgtcttctatcttgcaatagt gaaaatccacaagagaagcaatatctctttgaatgattgtccagatgaattaggtgcaaagctaagaatagaaagtgggg gacaaatgcattcataggtctcaatggaaacacctcactgaaaagctcagtaaagtatcaacctgatatatctgagaata agcttccaagttgtgaataatgtaagaaaatgtatttttgcaagatactccaatcctgaaataacttgtgtttacatttt tttaagattgattatgctggcataataaatgataacaacagtatcatgcacttctaataacttttgagctctgtgtttag ctcatgtaaggtatgtgaaatctgtaaagtatcttgcgttgaataacagtagacatttggcgttatattgctttctgaag gtgaatatcttactatgattgacagttgctatgaggtttgtctagattggctattcaaaagggggggggacttattttga gttggctgagctgcagtcatattgccatggggggcacataagttgtgaatcttatttaacttgattaaaactgcacaatt gtattgctttgtgcacaactttgtgtatagaacaactcaagtgttttatgatatgcttgttcttattccaattatccagt gtttttgcatgtacagtttttacaagaaattcacatttttctgggtatttgtgtcaaaattttacagtagaacaaatggc cttaaatctcacagatatcttggaaatgattgtgaattgccttttatttttctgtcaaaattgtgtcattgccttgtaat gtgtagcgctcttttttggcacataacctgtttgataccttctttactattatatatgttacactgaataatatgaaatt aaggtgcatttttaaagcatgaaagggatttcttctggaaaaaaacaaatacatatagcatcaatagtatatataatcct atgtaataaaaaatcttacattttttaatatattaaaggtccttaaaatactatcttat |
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| Transcript ID | habu1_s5890_g16371.t2 |
| Definition | - |
>habu1_s5890_g16371.t2 agcgccacctcttccccctccgcctcgccccgcctttggccccacatgttcggtccggaaaaactgttggggcagctgcc caagctggagagatacgggaatatggcgtccgtgggggattttaacccggtgagcgccaacgtgccggccacccgggtgg agatctccgtgtcttgcaggaaccttttggatagagatacattttcaaaatctgatccaatttgtgttttgtacacccaa gggatgggaaataaagaatggagagagtttggaagaacagaagtaattgacaacactttgaacccagatttcgtaagaaa atttataatggattacttttttgaggagagacagaacctgcgatttgatttgtatgatgttgattctaagagtccaaacc tttcaaagcatgatttcttgggacaagtgttctgtacactaggagaaattgttgggtcacaaggaagcagattagaaaag ccagttatattgaaacttccttggtggaacctggttgccaaagtaaaaatggctgatctaagtaggctaaagaaaggaat tcctgggaaaaaatgtggcacaataatactgacagcagaggaactgaactgttgccgggaagctgttttgatgcaatttt gtgcaaacaaattagacaagaaagatttttttgggaaatctgatcccttcctggtattttttcgtagcaatgaagatggc agtttcacaatctgccataagacagaagttataaagaacactttaaatccagtatggcaggctttcaagctatcgatcag agcactttgtaatggagattatgacagaacaattaaggtagaagtgtatgactgggatagagatggaagtcatgatttta ttggagaattcacaacaagctatagggaattatctagaggccagtcacagtttaatgtatatgaggtaataaatccaaag aaaaaggcaaaaaagaaaaagtatgttaattcaggaacagtaactttactttccttcctagtggaaacagaagtttcatt tctcgactatattaaaggagggactcaaatcaatttcaccgtggctattgattttacagcttcaaatggtaaccctgcac atccaacttcacttcactacatgaatccataccaactgaatgcatatggcatggcattaaaagcagtaggtgaaatcatt caagactatgatagtgacaaaatgtttccagctctaggttttggtgcaaaactgcccccggatggaagaatatctcatga gtttgctttgaatggaaacccacaaaatccttattgcaatggaattgatggcgtaatggaagcgtactatatgagtttaa aatctgtgcagctttatggaccaaccaactttgctccagttattaatcatgtagcaagatatgctgcctcaataaaagat ggctcccagtattttgttcttctcattattacagatggagtcatttctgatatggctcagacaaaggagtccatagtgca tgctgcaaagtttccaatgtcaataataatagtgggtgttggacctgcggaatttgatgccatggaagaattggatggtg atgaaataagggtttcatcaagaggagtttatgcagaaagagatatagtacagtttgtaccatttcgggattatgttgac agaactggaaatcacgtgttaagtatggcccgacttgcaagagatgtcttagctgagatcccggaccagtttctttccta catgagggtcagaggaatcaagccatttccggcaccccctccatacacacccccgattcacgtggtgcagactcagatat gagtactttgaatattgaatacttttcaaaattataccgtactgccaagaaagagttccagtacagtgacgcactttaag agccagcaagttctttgtatgcagtgagtagaattttcgagtgggctttggaaaaacataaaaaaaataataattaaaac ttcatataccaaaatgttcaatcttgctgcacacgcaactgaacagcttttatttacaagaagctaaatggttaagtcgt ttctaagtgttactctgtttctaacagaaaatgcctattatgtgggttttttggagaaagcacaagaccacgggttctat tcaaaagtcttttgtctttctgacttaatatgtatatataatgtgaatgcaaatcctctgtatcactgtttacatgttac tacttttgaaatttaactactttttatagttattcttaaaacatttgtcttctatcttgcaatagtgaaaatccacaaga gaagcaatatctctttgaatgattgtccagatgaattaggtgcaaagctaagaatagaaagtgggggacaaatgcattca taggtctcaatggaaacacctcactgaaaagctcagtaaagtatcaacctgatatatctgagaataagcttccaagttgt gaataatgtaagaaaatgtatttttgcaagatactccaatcctgaaataacttgtgtttacatttttttaagattgatta tgctggcataataaatgataacaacagtatcatgcacttctaataacttttgagctctgtgtttagctcatgtaaggtat gtgaaatctgtaaagtatcttgcgttgaataacagtagacatttggcgttatattgctttctgaaggtgaatatcttact atgattgacagttgctatgaggtttgtctagattggctattcaaaagggggggggacttattttgagttggctgagctgc agtcatattgccatggggggcacataagttgtgaatcttatttaacttgattaaaactgcacaattgtattgctttgtgc acaactttgtgtatagaacaactcaagtgttttatgatatgcttgttcttattccaattatccagtgtttttgcatgtac agtttttacaagaaattcacatttttctgggtatttgtgtcaaaattttacagtagaacaaatggccttaaatctcacag atatcttggaaatgattgtgaattgccttttatttttctgtcaaaattgtgtcattgccttgtaatgtgtagcgctcttt tttggcacataacctgtttgataccttctttactattatatatgttacactgaataatatgaaattaaggtgcattttta aagcatgaaagggatttcttctggaaaaaaacaaatacatatagcatcaatagtatatataatcctatgtaataaaaaat cttacattttttaatatattaaaggtccttaaaatactatcttat |
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Protein
| Protein ID | habu1_s5890_g16371.t1 |
|---|---|
| Definition | - |
>habu1_s5890_g16371.t1 MFGPEKLLGQLPKLERYGNMASVGDFNPVSANVPATRVEISVSCRNLLDRDTFSKSDPICVLYTQGMGNKEWREFGRTEV IDNTLNPDFVRKFIMDYFFEERQNLRFDLYDVDSKSPNLSKHDFLGQVFCTLGEIVGSQGSRLEKPVIGIPGKKCGTIIL TAEELNCCREAVLMQFCANKLDKKDFFGKSDPFLVFFRSNEDGSFTICHKTEVIKNTLNPVWQAFKLSIRALCNGDYDRT IKVEVYDWDRDGSHDFIGEFTTSYRELSRGQSQFNVYEVINPKKKAKKKKYVNSGTVTLLSFLVETEVSFLDYIKGGTQI NFTVAIDFTASNGNPAHPTSLHYMNPYQLNAYGMALKAVGEIIQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNP YCNGIDGVMEAYYMSLKSVQLYGPTNFAPVINHVARYAASIKDGSQYFVLLIITDGVISDMAQTKESIVHAAKFPMSIII VGVGPAEFDAMEELDGDEIRVSSRGVYAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQFLSYMRVRGIKPFP APPPYTPPIHVVQTQI |
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| Protein ID | habu1_s5890_g16371.t2 |
| Definition | - |
>habu1_s5890_g16371.t2 MFGPEKLLGQLPKLERYGNMASVGDFNPVSANVPATRVEISVSCRNLLDRDTFSKSDPICVLYTQGMGNKEWREFGRTEV IDNTLNPDFVRKFIMDYFFEERQNLRFDLYDVDSKSPNLSKHDFLGQVFCTLGEIVGSQGSRLEKPVILKLPWWNLVAKV KMADLSRLKKGIPGKKCGTIILTAEELNCCREAVLMQFCANKLDKKDFFGKSDPFLVFFRSNEDGSFTICHKTEVIKNTL NPVWQAFKLSIRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELSRGQSQFNVYEVINPKKKAKKKKYVNSGTVT LLSFLVETEVSFLDYIKGGTQINFTVAIDFTASNGNPAHPTSLHYMNPYQLNAYGMALKAVGEIIQDYDSDKMFPALGFG AKLPPDGRISHEFALNGNPQNPYCNGIDGVMEAYYMSLKSVQLYGPTNFAPVINHVARYAASIKDGSQYFVLLIITDGVI SDMAQTKESIVHAAKFPMSIIIVGVGPAEFDAMEELDGDEIRVSSRGVYAERDIVQFVPFRDYVDRTGNHVLSMARLARD VLAEIPDQFLSYMRVRGIKPFPAPPPYTPPIHVVQTQI |
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