Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5890_g16372
Locus habu1_scaffold5890 : 748943 ... 813156 : -
To GenomeBrowser habu1_scaffold5890:748943..813156
Genes list of scaffold habu1_scaffold5890

Annotation by Blast2GO
Annotation GO
low quality protein: rna-directed dna polymerase from mobile element jockey-like GO:0001934 GO:0002252 GO:0005886 GO:0019219 GO:0042113 GO:0050776 GO:0090304 GO:1902533

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s5890_g16372.t1 gi|701399443|ref|XP_009996269.1| PREDICTED: gamma-tubulin complex component 3 [Chaetura pelagica] 2.0e-11

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 2.8
Pit, infrared sensing 0.1
Nose 0.0
Brain-1 0.1
Eye 0.1
fetal fibroblast 0.1
venom gland-2 21.8
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.1
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s5890_g16372.t1
Definition-
>habu1_s5890_g16372.t1
ttgccagcaatggcaaagctgtcccgacagtcttgcgacgtcacatgacgttacctatcagcctgacctcaatacctggg
aagattctggatgaggggatagatttggacgaggggatagatggggaactcatcaaatttgcagacgacaccaagctggc
aggaatagccaacattccagaagaccggcttaggatacaggaggatctggacagacttgaacactgggcactatctaaca
aaatgaaattcaatggtggaaaaaatgccttcaccagaccagcagccatgccagcatcctactgaggaatacagagaata
atccaagagtgcaaatataagaatggttgctctcagattttcaaaatgaaccaagcattccatacctcctcaggaactcc
aggaaatgcctgatggactttaataagctgaaggagatagaaagaagtccaatgaactgttgccaaggtttctgggagag
taagtccccttttcctcttggcttattgagataaatattaccagcaagatttccgccccacccttatactaacggaagcg
gtgaattaatctttttatggaggatcaaaatatatggaagtgaaataaatataaaacctgaaatttaaaac

Protein
Protein IDhabu1_s5890_g16372.t1
Definition-
>habu1_s5890_g16372.t1
MTLPISLTSIPGKILDEGIDLDEGIDGELIKFADDTKLAGIANIPEDRLRIQEDLDRLEHWALSNKMKFNGGKNAFTRPA
AMPASYXGIQRIIQECKYKNGCSQIFKMNQAFHTSSGTPGNA

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