Gene
| Gene Model ID | habu1_s5910_g16405 |
|---|---|
| Locus | habu1_scaffold5910 : 30316 ... 50273 : + |
| To GenomeBrowser | habu1_scaffold5910:30316..50273 |
| Genes list of scaffold | habu1_scaffold5910 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| microtubule-associated proteins 1a 1b light chain 3c-like | GO:0006914 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16405.t2 | gi|694856448|ref|XP_009469812.1| | PREDICTED: microtubule-associated proteins 1A/1B light chain 3C-like [Nipponia nippon] | 5.0e-09 |
| habu1_s5910_g16405.t2 | gi|723579273|ref|XP_010309869.1| | PREDICTED: microtubule-associated proteins 1A/1B light chain 3C-like, partial [Balearica regulorum gibbericeps] | 6.0e-08 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.5 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 1.7 |
| heart | 0.0 |
| ovary | 105.3 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s5910_g16405.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16405.t1 gtcgaggactaaaccggtcgtaagttgaggactacccaaccggtcgtaagtcgaggactttccctgcccgggaacgccgc acatgcgtggttccgccccctgcgccggccgaggcgtagctggcaagcggcagagacggagcaggccgaccaccagctgg cccagcccaagagagatgcaaagaaaccagtgtgaaaaccgtcctttcaaggagaggaaaagttttgcaactcggatgaa tgagacaacagaaattcgggggaagtatccgaacaaaattccggtggtagtggaacgttacaggaaggagaagtctcttc cccagttggatcggatcaagtttttggtttctccagatatatccatatctcagtttgttttcactctgagaacccggcta tccctcacagctacacaagccttctacttactcgtgaacaatcaaaccctaccctgtcctagtctgactattttacagat ctacaacgacaacaaggatgaagatggcttcctctacatgacctatgcttctcaagagatgtttggtgcaggttcccctt ctgaacaccaatgaagccattctcgnnnnnnnnnnnnnnnnnnngtgatccacacctccctgagagccaaaatcagcaaa aagaagttttttaaagactgtttgggtgcaagaatggcctgggagggtattcgcagccagccacaggattttctcttatg actttggtccctgatactacttcgttgcttcacttttggttctgcctgaatggaattttgggaggatgtggtcctttgag gttcttactaactctgcgggttgttagtttaatccactgccagcttattctttttcagatttactgttttatttatttat ttatttatttattttcttcataaaatgaatttcacttcctattgcgcactgagagcagagtccttttattagggaaaaaa gctgactgacctaaggaggaggatctggagaatgccacttgtggacattttaattgtacagtcattggttactgcatccc tccctctctttccccttttccccttaagattacaataaagaaataaatgagcgcaattccatatctgat |
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| Transcript ID | habu1_s5910_g16405.t2 |
| Definition | - |
>habu1_s5910_g16405.t2 gtcgaggactaaaccggtcgtaagttgaggactacccaaccggtcgtaagtcgaggactttccctgcccgggaacgccgc acatgcgtggttccgccccctgcgccggccgaggcgtagctggcaagcggcagagacggagcaggccgaccaccagctgg cccagcccaagagagatgcaaagaaaccagtgtgaaaaccgtcctttcaaggagaggaaaagttttgcaactcggatgaa tgagacaacagaaattcgggggaagtatccgaacaaaattccgaacccggctatccctcacagctacacaagccttctac ttactcgtgaacaatcaaaccctaccctgtcctagtctgactattttacagatctacaacgacaacaaggatgaagatgg cttcctctacatgacctatgcttctcaagagatgtttggtgcaggttccccttctgaacaccaatgaagccattctcgnn nnnnnnnnnnnnnnnnngtgatccacacctccctgagagccaaaatcagcaaaaagaagttttttaaagactgtttgggt gcaagaatggcctgggagggtattcgcagccagccacaggattttctcttatgactttggtccctgatactacttcgttg cttcacttttggttctgcctgaatggaattttgggaggatgtggtcctttgaggttcttactaactctgcgggttgttag tttaatccactgccagcttattctttttcagatttactgttttatttatttatttatttatttattttcttcataaaatg aatttcacttcctattgcgcactgagagcagagtccttttattagggaaaaaagctgactgacctaaggaggaggatctg gagaatgccacttgtggacattttaattgtacagtcattggttactgcatccctccctctctttccccttttccccttaa gattacaataaagaaataaatgagcgcaattccatatctgat |
|
Protein
| Protein ID | habu1_s5910_g16405.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16405.t1 MRGSAPCAGRGVAGKRQRRSRPTTSWPSPREMQRNQCENRPFKERKSFATRMNETTEIRGKYPNKIPVVVERYRKEKSLP QLDRIKFLVSPDISISQFVFTLRTRLSLTATQAFYLLVNNQTLPCPSLTILQIYNDNKDEDGFLYMTYASQEMFGAGSPS EHQ |
|
| Protein ID | habu1_s5910_g16405.t2 |
| Definition | - |
>habu1_s5910_g16405.t2 MRGSAPCAGRGVAGKRQRRSRPTTSWPSPREMQRNQCENRPFKERKSFATRMNETTEIRGKYPNKIPNPAIPHSYTSLLL TREQSNPTLS |
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