Gene
| Gene Model ID | habu1_s5910_g16406 |
|---|---|
| Locus | habu1_scaffold5910 : 149163 ... 188555 : - |
| To GenomeBrowser | habu1_scaffold5910:149163..188555 |
| Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16406.t2 | 1 | 1 | WW | 7 | 25 | 1.8e-09 | 37.2 | 1.4e-12 | 4.1e-09 | 36.1 |
| habu1_s5910_g16406.t2 | 1 | 1 | Rotamase_3 | 35 | 143 | 3.8e-23 | 81.9 | 1.5e-26 | 4.3e-23 | 81.7 |
| habu1_s5910_g16406.t2 | 1 | 1 | Rotamase | 43 | 146 | 3.2e-26 | 91.9 | 2.0e-29 | 5.9e-26 | 91.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16406.t2 | gi|591381195|ref|XP_007065135.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Chelonia mydas] | 0.0 |
| habu1_s5910_g16406.t2 | gi|697438265|ref|XP_009688345.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 23.4 |
| Venom grand-1 | 16.5 |
| Pit, infrared sensing | 28.3 |
| Nose | 23.0 |
| Brain-1 | 41.3 |
| Eye | 24.8 |
| fetal fibroblast | 34.4 |
| venom gland-2 | 13.3 |
| Brain-2 | 44.7 |
| Spleen | 22.9 |
| Lung | 19.6 |
| Liver | 18.8 |
| Kidney | 17.3 |
| Pancreas | 10.1 |
| Small intestine | 12.3 |
| Large intestine | 19.8 |
| Stomach | 18.3 |
| heart | 41.9 |
| ovary | 35.1 |
| cheek muscle | 50.1 |
Transcript
| Transcript ID | habu1_s5910_g16406.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16406.t1 ggcggcgttgccaggagaagtgggcgtggccggctctgcgcttgctgccgtgagaagaggaaagatggcggaggaggaga agctccccgcgggctgggagaagcgcatgagccgcagctccgggcgtgtttattatttcaaccacatcacaaatgccagc caatgggagcgccccactggcaatagcaagaatggtcaaggggagccaacaaaagtgcgatgctcacacctcttggtgaa acacaatcaatctaggagaccatcatcatggagggaagataaaatcacgcgaagcaaggaggaggccctggaactaatta atggctacatccagaagattaaatctggggaggaagattttgaatccttagcatcacagttcagtgactgcagctcagcc aaggcagggggagacctgggtacttttggaagaggtcaaatgcagaaacctttcgaagatgcctcctttgcgctgaggac tggtgagatgagtggaccagtattcacagattcagggatccatataattctgcgtacagaatgagtattttggtaccatg cacttggaaaagaaagggtgattgggaaaaaaggaacaagagaacctttattccaaccattgattttattttaatgtgct ttctgatcagtcaaatggaacataggattcagattttttagtgcagacccacaacttgcgaatcaccagatcaaggacat gcccctccataaactgtgaccttcaaattccttgatatatcacctgctttgagaactgctggatagatggaggaaaagaa acctgattagtccccattcattcctctcaatttgctgagtcacatgttgttctggtgatgagaaaagtattggaaaagag aagtaaagattaaagataagtattgacctatgtaat |
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| Transcript ID | habu1_s5910_g16406.t2 |
| Definition | - |
>habu1_s5910_g16406.t2 ggcggcgttgccaggagaagtgggcgtggccggctctgcgcttgctgccgtgagaagaggaaagatggcggaggaggaga agctccccgcgggctgggagaagcgcatgagccgcagctccggtggaggcaggggtccttcccatattttatcttggtaa ccactctgcaagaaggtaggctaggttgagaaataattatccatttgagattttataactggtatacattggaagctgga tttccccaaaagtactatagtttgatcatgctttagctacaatatgccatctaaatacatagttttttaaacttttagta tgtctgttaaacctaaatgcaatcctgttgcatctgcttgatataattttagaaaataaggctttattgactgcattttc tgcaatcatggcaaatgcattcagctgctctgtagttttgcttagtattcttttcagtcttgtaatctaattgtgtagct attctgattttcctccctccacttctgatgggtttagagatattgacttgctgattattaataagccaaacattacttgg aaaaatgcatcttttataacaatttgctcaaaattattttaatatttgcagaagtagaaaaacattgataaagcaaatgg taaaacctcttcccctacagcattagaaagggttacatgtgtgtagtcacaggaaataatagaaagaggaaggattacag atcaaatcaggaagtacagaggcatttagccaagctacttgctctcagcaggagatgtattctcagagcattagacaggt tcatattgtccaaggaagaaaattgtgctaagagatggaggacgaaaaagaaaaagggcgtgtttattatttcaaccaca tcacaaatgccagccaatgggagcgccccactggcaatagcaagaatggtcaaggggagccaacaaaagtgcgatgctca cacctcttggtgaaacacaatcaatctaggagaccatcatcatggagggaagataaaatcacgcgaagcaaggaggaggc cctggaactaattaatggctacatccagaagattaaatctggggaggaagattttgaatccttagcatcacagttcagtg actgcagctcagccaaggcagggggagacctgggtacttttggaagaggtcaaatgcagaaacctttcgaagatgcctcc tttgcgctgaggactggtgagatgagtggaccagtattcacagattcagggatccatataattctgcgtacagaatgagt attttggtaccatgcacttggaaaagaaagggtgattgggaaaaaaggaacaagagaacctttattccaaccattgattt tattttaatgtgctttctgatcagtcaaatggaacataggattcagattttttagtgcagacccacaacttgcgaatcac cagatcaaggacatgcccctccataaactgtgaccttcaaattccttgatatatcacctgctttgagaactgctggatag atggaggaaaagaaacctgattagtccccattcattcctctcaatttgctgagtcacatgttgttctggtgatgagaaaa gtattggaaaagagaagtaaagattaaagataagtattgacctatgtaat |
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Protein
| Protein ID | habu1_s5910_g16406.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16406.t1 MAEEEKLPAGWEKRMSRSSGRVYYFNHITNASQWERPTGNSKNGQGEPTKVRCSHLLVKHNQSRRPSSWREDKITRSKEE ALELINGYIQKIKSGEEDFESLASQFSDCSSAKAGGDLGTFGRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE |
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| Protein ID | habu1_s5910_g16406.t2 |
| Definition | - |
>habu1_s5910_g16406.t2 MEDEKEKGRVYYFNHITNASQWERPTGNSKNGQGEPTKVRCSHLLVKHNQSRRPSSWREDKITRSKEEALELINGYIQKI KSGEEDFESLASQFSDCSSAKAGGDLGTFGRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE |
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