Gene
| Gene Model ID | habu1_s5910_g16409 |
|---|---|
| Locus | habu1_scaffold5910 : 254956 ... 269404 : + |
| To GenomeBrowser | habu1_scaffold5910:254956..269404 |
| Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16409.t1 | 1 | 1 | Lectin_C | 78 | 181 | 7.4e-25 | 87.6 | 2.5e-28 | 1.2e-24 | 86.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16409.t1 | gi|602629108|ref|XP_007421484.1| | PREDICTED: hepatic lectin-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16409.t1 | gi|527245655|ref|XP_005141165.1| | PREDICTED: hepatic lectin-like [Melopsittacus undulatus] | 0.0 |
| habu1_s5910_g16409.t1 | gi|558127661|ref|XP_006115604.1| | PREDICTED: hepatic lectin-like isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.9 |
| Pit, infrared sensing | 2.4 |
| Nose | 1.1 |
| Brain-1 | 0.1 |
| Eye | 1.8 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.0 |
| Spleen | 1.8 |
| Lung | 1.1 |
| Liver | 4.9 |
| Kidney | 1.3 |
| Pancreas | 0.2 |
| Small intestine | 0.5 |
| Large intestine | 5.2 |
| Stomach | 1.2 |
| heart | 0.0 |
| ovary | 0.4 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s5910_g16409.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16409.t1 tgcgaacagcaaatgaaagatcaagaatatttaacagaaaccagaacaaacatgccagcaagaacaattgacagatttat cccacaatggaaatggacatccactataatttatgtgcttctggccatttcttacctgctgatcatcatattgttcgggc ttgtggcatcccagggaaggagcaagtgggaccaacatctagaaaacctgtacccatgtggagccaaaagcagagaatgg aaatattttgatggtgcatgttacttcttctccgtcacacaagttatttggcacatagcaaagaataagtgtgaagaaga gaattcagaattggtagtcattaccaatcagtatgaacagaattttcttgagactgaaaccaggagtcagcgcttctgga ttggactcagtgatcacaatactgaagggcaatggagatgggttgataacacagactacagaaccagcttcaagaattgg ttagaaggcgaacccaatgacaatagcaataatgaagactgcggcgagctctttgaggctggaaaatggaacgatgtagc ctgtaatacgaaaaaattttatgtgtgcaaaaaacctttgcctccctgaaaaatcatgagtgaaaaaaattgaaggagaa ggaaatcacctactttggaatcccaattattctggattgctggaatgaaactatatattaacacccccaaaaaaaagcca ggccaatcaataccctcttattggggaaaaaatagatctttaaattggttggcaaaaaaaacaaaattattttccaattt gaaaaatatttgtcaatgagtttgtttcagttcttaagaaagacctattctagatcaagagttgagctgttggattccta taggtgcttccatcacctgccaaatcatgaaaacccatgtatatatggtgcctccgctatcaaatatattgctcatgttt tcttgactctcaactgtatgcttctcttaggcgtagatatttaacatcccttgtgggccacagagaacagaaaccatgtg tcatgagatattttttttagcatttttacccagcttgaaaatagttaacaaaaggacagggagccaaccctccataataa aaactgtttcaacgaatagctcc |
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Protein
| Protein ID | habu1_s5910_g16409.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16409.t1 MPARTIDRFIPQWKWTSTIIYVLLAISYLLIIILFGLVASQGRSKWDQHLENLYPCGAKSREWKYFDGACYFFSVTQVIW HIAKNKCEEENSELVVITNQYEQNFLETETRSQRFWIGLSDHNTEGQWRWVDNTDYRTSFKNWLEGEPNDNSNNEDCGEL FEAGKWNDVACNTKKFYVCKKPLPP |
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