Gene
| Gene Model ID | habu1_s5910_g16412 |
|---|---|
| Locus | habu1_scaffold5910 : 450125 ... 463965 : - |
| To GenomeBrowser | habu1_scaffold5910:450125..463965 |
| Genes list of scaffold | habu1_scaffold5910 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| multivesicular body subunit 12a | GO:0000813 GO:0005634 GO:0005829 GO:0008289 GO:0016235 GO:0042058 GO:0043130 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16412.t1 | 1 | 1 | DUF2464 | 4 | 248 | 0.0 | 244.3 | 0.0 | 0.0 | 244.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16412.t1 | gi|602629112|ref|XP_007421486.1| | PREDICTED: multivesicular body subunit 12A-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16412.t1 | gi|637320359|ref|XP_008112648.1| | PREDICTED: multivesicular body subunit 12A [Anolis carolinensis] | 0.0 |
| habu1_s5910_g16412.t1 | gi|395512597|ref|XP_003760522.1| | PREDICTED: multivesicular body subunit 12A [Sarcophilus harrisii] | 0.0 |
| habu1_s5910_g16412.t1 | gi|530649930|ref|XP_005311445.1| | PREDICTED: multivesicular body subunit 12A isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5910_g16412.t1 | gi|612010353|ref|XP_007488654.1| | PREDICTED: multivesicular body subunit 12A [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.7 |
| Venom grand-1 | 11.9 |
| Pit, infrared sensing | 13.9 |
| Nose | 22.6 |
| Brain-1 | 2.0 |
| Eye | 6.3 |
| fetal fibroblast | 26.5 |
| venom gland-2 | 24.9 |
| Brain-2 | 1.3 |
| Spleen | 10.2 |
| Lung | 8.3 |
| Liver | 11.6 |
| Kidney | 16.4 |
| Pancreas | 7.8 |
| Small intestine | 10.9 |
| Large intestine | 24.1 |
| Stomach | 13.1 |
| heart | 15.8 |
| ovary | 75.1 |
| cheek muscle | 18.1 |
Transcript
| Transcript ID | habu1_s5910_g16412.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16412.t1 cgggtcgaaaaactcgaaggagtttcgttctgttcgcttcccgtaacgttcgacctttctgttcgcggacggtttttttt tttttnnnnnnnnnnnnnnnnnttttttttctttctcgtattttaacggcttcctgtgtctgaaaacggttgaaccgtcc cagagctggcatgaccgctccgtttaccgggctgggctggacttcgtccaatgtgccggttgctggctggattccgatca cagcaactgtggaaggagcacctgctaactttgggaaaggatttgcacaaaaatatggatattacctctgcttcactgta tctgtagacgctttgaatccaactggagacgtattatatgatgttgtgatcctgagtgagaaatcgccattgccttctgg atatgcatatgctaaagaatttttggatttaaaaacctctgtctctaagaagaagaggctatgtgtcaagctgatcccaa tgggtgtggcagaaacagctgtgtgtgacatcatgctaagcagcaagagcaaagtgatccccaattacatacgcgttggg gaaataagtggttttgccctttggtgtaaaaaagaacacataaacaaacctagaccccttcccaaaccaaggagtatcag tctagaaatgaaccagctttcattagaaacagcaaacgtagaccctctttctattggctccaaaagacaaactaccatta agaaaaatgaatctatatacgatacatcaaatacctatggtatttcagccatagatggggtcccttttactctgcatcct aagtttgagaacaatgtcactcatggtaccactgccctttcaatatttaaaaactttcacatcaagtctcttgctgacat tgagaaagagtatgactacagttttgtaattgaaagaactgcagctgcgagactcccacccaccatttcatagcatcaat catttcctggagagttcttgccgctaggggcttatgggtggtcaagctgactcaactaagctgatggaatacctgcctca aagggattgtgctgttgggggcactgctttactagctgaaattagtataattgtaatcctgctgatattatattttgcta caggtacgagttgaactacttttgtatacactttttccaagcatcatatctattttctttgcaaagaaaaatgtattaaa agtaaaaggcttattttaccag |
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Protein
| Protein ID | habu1_s5910_g16412.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16412.t1 MTAPFTGLGWTSSNVPVAGWIPITATVEGAPANFGKGFAQKYGYYLCFTVSVDALNPTGDVLYDVVILSEKSPLPSGYAY AKEFLDLKTSVSKKKRLCVKLIPMGVAETAVCDIMLSSKSKVIPNYIRVGEISGFALWCKKEHINKPRPLPKPRSISLEM NQLSLETANVDPLSIGSKRQTTIKKNESIYDTSNTYGISAIDGVPFTLHPKFENNVTHGTTALSIFKNFHIKSLADIEKE YDYSFVIERTAAARLPPTIS |
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